{ "type": "genome", "identifier": "GCF_004327335.1", "organism": "Stutzerimonas kirkiae", "title": "Stutzerimonas kirkiae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of the West of England", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004327335.1", "bioproject": "PRJNA224116", "biosample": "SAMN09280092", "wgs_master": "QJUO00000000.1", "refseq_category": "reference genome", "taxid": "2211392", "species_taxid": "2211392", "organism_name": "Stutzerimonas kirkiae", "infraspecific_name": "strain=P4C", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/05", "asm_name": "ASM432733v1", "asm_submitter": "University of the West of England", "gbrs_paired_asm": "GCA_004327335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/327/335/GCF_004327335.1_ASM432733v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4353628", "genome_size_ungapped": "4353628", "gc_percent": "63.500000", "replicon_count": "0", "scaffold_count": "85", "contig_count": "85", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004327335.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3837", "protein_coding_gene_count": "3688", "non_coding_gene_count": "62", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-03-05", "dateModified": "2019-03-05", "datePublished": "2019-03-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Stutzerimonas kirkiae" ], "sample_taxid": [ "2211392" ], "sample_host_organism": [ "Quercus robur" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1412, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 81.1956, "matched_fragments": 636, "total_fragments": 1412, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 81.1278, "matched_fragments": 618, "total_fragments": 1412, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=CGMCC 1.1803", "accession": "GCA_000219605.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 81.0829, "matched_fragments": 628, "total_fragments": 1412, "ani_threshold": 95, "status": "below_threshold" }, 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