{
    "type": "genome",
    "identifier": "GCF_004345615.1",
    "organism": "Natronoflexus pectinivorans",
    "title": "Natronoflexus pectinivorans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_004345615.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10864842",
        "wgs_master": "SLWK00000000.1",
        "refseq_category": "reference genome",
        "taxid": "682526",
        "species_taxid": "682526",
        "organism_name": "Natronoflexus pectinivorans",
        "infraspecific_name": "strain=DSM 24179",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/03/11",
        "asm_name": "ASM434561v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_004345615.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/345/615/GCF_004345615.1_ASM434561v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4472281",
        "genome_size_ungapped": "4471797",
        "gc_percent": "39.500000",
        "replicon_count": "0",
        "scaffold_count": "46",
        "contig_count": "46",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004345615.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "3388",
        "protein_coding_gene_count": "3326",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-03-11",
    "dateModified": "2019-03-11",
    "datePublished": "2019-03-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Natronoflexus pectinivorans"
        ],
        "sample_taxid": [
            "682526"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: South-East Siberia, Altai"
        ],
        "sample_host_location_id": [],
        "data_size": "1.267 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
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        "Number of Sequences": "46",
        "Longest Sequences (bp)": "924665",
        "N50 (bp)": "325539",
        "Gap Ratio (%)": "0.010822",
        "GCcontent (%)": "39.6",
        "Number of CDSs": "3319",
        "Average Protein Length": "385.6",
        "Coding Ratio (%)": "85.8",
        "Number of rRNAs": "2",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
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                "relation_to_type": "type",
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            },
            {
                "organism_name": "Alkalitalea saponilacus",
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                "ani_threshold": 95,
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            },
            {
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                "species_taxid": 1965019,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geofilum rubicundum",
                "strain": "strain=JCM 15548",
                "accession": "GCA_000974365.1",
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                "species_taxid": 472113,
                "relation_to_type": "type",
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                "ani": 76.6728,
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                "total_fragments": 1465,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Marinilabilia rubra",
                "strain": "strain=WTE16",
                "accession": "GCA_003121985.1",
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                "species_taxid": 2162893,
                "relation_to_type": "type",
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                "status": "below_threshold"
            }
        ],
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
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        "optimum_tmp": null,
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        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Natronoflexus",
        "pectinivorans"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}