{ "type": "genome", "identifier": "GCF_004345675.1", "organism": "Caldanaerobacter subterraneus", "title": "Caldanaerobacter subterraneus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004345675.1", "bioproject": "PRJNA224116", "biosample": "SAMN10864811", "wgs_master": "SLWU00000000.1", "refseq_category": "na", "taxid": "911092", "species_taxid": "911092", "organism_name": "Caldanaerobacter subterraneus", "infraspecific_name": "strain=DSM 13054", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/11", "asm_name": "ASM434567v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_004345675.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/345/675/GCF_004345675.1_ASM434567v1", 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"total_fragments": 824, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Caldanaerobacter subterraneus subsp. tengcongensis", "strain": "strain=MB4", "accession": "GCA_000007085.1", "taxid": 119072, "species_taxid": 911092, "relation_to_type": "type", "validated": true, "ani": 97.7995, "matched_fragments": 686, "total_fragments": 824, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Caldanaerobacter subterraneus subsp. tengcongensis", "strain": "strain=MB4", "accession": "GCA_024807135.1", "taxid": 119072, "species_taxid": 911092, "relation_to_type": "type", "validated": true, "ani": 97.6459, "matched_fragments": 690, "total_fragments": 824, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Caldanaerobacter subterraneus subsp. pacificus", "strain": "strain=DSM 12653", "accession": "GCA_000156275.2", "taxid": 109807, "species_taxid": 911092, "relation_to_type": "type", "validated": true, "ani": 97.4305, "matched_fragments": 564, 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900129115.1", "gtdb_species": "s__Thermoanaerobacter uzonensis", "ani": 80.278, "matched_fragments": 343, "total_fragments": 824, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Thermoanaerobacteria;o__Thermoanaerobacterales;f__Thermoanaerobacteraceae;g__Thermoanaerobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.59", "min_intra_species_ani": "96.59", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.87", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.398, "cell_length": 0.0, "doubling_h": 0.029, "growth_tmp": 70.975, "optimum_tmp": 73.0, "optimum_ph": 7.25, "genome_size": 2649090.75, "gc_content": 37.575, "coding_genes": 2519.333, "rRNA16S_genes": 4.0, "tRNA_genes": 56.0, "gram_stain": 1.0, "sporulation": 1.0, "motility": 0.0, 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