{ "type": "genome", "identifier": "GCF_004348415.1", "organism": "Streptomyces hainanensis", "title": "Streptomyces hainanensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ondokuz Mayis University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004348415.1", "bioproject": "PRJNA224116", "biosample": "SAMN11032576", "wgs_master": "SMKI00000000.1", "refseq_category": "reference genome", "taxid": "402648", "species_taxid": "402648", "organism_name": "Streptomyces hainanensis", "infraspecific_name": "strain=DSM 41900", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/13", "asm_name": "ASM434841v1", "asm_submitter": "Ondokuz Mayis University", "gbrs_paired_asm": "GCA_004348415.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/348/415/GCF_004348415.1_ASM434841v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7991366", "genome_size_ungapped": "7991366", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "951", "contig_count": "951", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004348415.1-RS_2024_04_19", "annotation_date": "2024-04-19", "total_gene_count": "7456", "protein_coding_gene_count": "7027", "non_coding_gene_count": "70", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-03-13", "dateModified": "2019-03-13", "datePublished": "2019-03-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces hainanensis" ], "sample_taxid": [ "402648" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Hainan province" ], "sample_host_location_id": [], "data_size": "2.151 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7991366", "Number of Sequences": "951", "Longest Sequences (bp)": "59955", "N50 (bp)": "13702", "Gap Ratio (%)": "0.000038", "GCcontent (%)": "73.0", "Number of CDSs": "6639", "Average Protein Length": "318.3", "Coding Ratio (%)": "79.3", "Number of rRNAs": "6", "Number of tRNAs": "75", "Number of CRISPRs": "13" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces hainanensis", "strain": "strain=DSM 41900", "accession": "GCA_004348415.1", "taxid": 402648, "species_taxid": 402648, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2161, "total_fragments": 2201, 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