# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_15	LOCUS_00120	sequence02:1818..2087(-)	frameshift,internal_stop_codon	2275..2277(-)	2187	WP_003549893.1	IS110 family transposase	88.8	19.4	91.1
MGA_16	LOCUS_00130	sequence02:2449..2676(-)	frameshift,internal_stop_codon	2275..2277(-)	2472,2193,2442	WP_003549893.1	IS110 family transposase	92.0	16.9	87.0
MGA_34	LOCUS_00300	sequence03:15000..15554(-)	frameshift,internal_stop_codon	15647..15649(-)	15562	WP_003549893.1	IS110 family transposase	84.8	38.2	41.0
MGA_59	LOCUS_00510	sequence08:7067..7273(-)	partial			WP_003547715.1	M23 family metallopeptidase	60.3	19.2	61.0
MGA_72	LOCUS_00640	sequence08:19471..19755(-)	frameshift		19747	WP_003547614.1	8-oxo-dGTP diphosphatase	97.9	63.0	70.7
MGA_73	LOCUS_00650	sequence08:19721..19897(-)	frameshift		19747	WP_003547614.1	8-oxo-dGTP diphosphatase	86.2	34.2	86.0
MGA_76	LOCUS_00680	sequence08:21525..22322(+)	frameshift		22241	WP_003547606.1	peptidase T	89.8	57.3	94.1
MGA_77	LOCUS_00690	sequence08:22352..22756(+)	frameshift		22241	WP_003547606.1	peptidase T	100.0	32.3	91.8
MGA_111	LOCUS_01020	sequence09:2420..2683(+)	internal_stop_codon	2681..2683(+)		WP_050340461.1	site-specific integrase	100.0	44.6	97.7
MGA_112	LOCUS_01030	sequence09:2795..3007(+)	internal_stop_codon	2681..2683(+)		WP_050340461.1	site-specific integrase	100.0	35.9	94.3
MGA_114	LOCUS_01050	sequence09:3774..3947(+)	partial			WP_010625611.1	hypothetical protein	91.2	74.3	92.3
MGA_115	LOCUS_01060	sequence09:4102..4317(-)	partial			WP_103152732.1	IS5 family transposase	100.0	27.1	98.6
MGA_118	LOCUS_01090	sequence09:7589..7819(-)	frameshift,internal_stop_codon	7589..7591(-),7850..7852(-)	7988	WP_002291207.1	multidrug efflux MFS transporter EfmA	98.7	17.5	57.3
MGA_119	LOCUS_01100	sequence09:7980..8474(-)	frameshift,internal_stop_codon	7849..7851(-)	7984,8350	WP_187289197.1	MFS transporter	65.9	25.4	56.5
MGA_120	LOCUS_01110	sequence09:8634..8837(-)	partial			WP_011241757.1	MobQ family relaxase	59.7	5.8	92.5
MGA_123	LOCUS_01140	sequence09:12294..12629(+)	frameshift		12205	WP_003644345.1	universal stress protein	95.5	71.7	40.5
MGA_124	LOCUS_01150	sequence09:12856..13215(-)	partial			WP_016381870.1	hypothetical protein	100.0	70.8	99.2
MGA_126	LOCUS_01170	sequence09:13644..14120(-)	partial			WP_061777522.1	hypothetical protein	100.0	62.5	91.8
MGA_127	LOCUS_01180	sequence09:14163..14354(-)	internal_stop_codon	14373..14375(-)		WP_116878224.1	IS982 family transposase	90.5	22.0	51.7
MGA_142	LOCUS_01330	sequence11:12036..12206(-)	partial			WP_011836481.1	Cof-type HAD-IIB family hydrolase	100.0	20.3	60.7
MGA_143	LOCUS_01340	sequence11:12256..12429(-)	partial			WP_011476527.1	Cof-type HAD-IIB family hydrolase	93.0	19.9	52.8
MGA_145	LOCUS_01360	sequence11:13361..14221(-)	internal_stop_codon	14225..14227(-)		WP_003549632.1	sugar ABC transporter permease	100.0	63.3	91.6
MGA_146	LOCUS_01370	sequence11:14225..14719(-)	internal_stop_codon	14225..14227(-)		WP_003549632.1	sugar ABC transporter permease	100.0	36.3	82.3
MGA_157	LOCUS_01460	sequence13:428..820(-)	frameshift,internal_stop_codon	909..911(-)	851	WP_051523200.1	helix-turn-helix transcriptional regulator	98.5	75.3	71.8
MGA_174	LOCUS_01630	sequence13:10673..10939(-)	frameshift		10980	WP_010905898.1	MFS transporter	93.2	17.8	52.4
MGA_175	LOCUS_01640	sequence13:10957..11199(-)	frameshift		10971	WP_011673958.1	MFS transporter	77.5	13.6	41.9
MGA_176	LOCUS_01650	sequence13:11192..11689(-)	internal_stop_codon	11705..11707(-)		WP_003548076.1	GyrI-like domain-containing protein	95.8	76.0	67.1
MGA_177	LOCUS_01660	sequence13:11705..11839(-)	internal_stop_codon	11705..11707(-)		WP_003548076.1	GyrI-like domain-containing protein	100.0	21.2	65.9
MGA_195	LOCUS_01830	sequence14:13154..13477(+)	partial			WP_011254059.1	DNA-3-methyladenine glycosylase I	80.4	45.3	58.1
MGA_212	LOCUS_02000	sequence14:30861..31082(-)	frameshift		30826	WP_003548719.1	ABC transporter substrate-binding protein/permease	65.8	9.8	62.5
MGA_216	LOCUS_02040	sequence14:34015..34467(-)	frameshift		34523	WP_003642965.1	SDR family oxidoreductase	100.0	70.3	60.0
MGA_259	LOCUS_02460	sequence16:1216..1581(-)	partial			WP_011101571.1	restriction endonuclease	89.3	34.4	50.9
MGA_278	LOCUS_02640	sequence17:12757..13398(-)	partial			WP_091620756.1	oxidoreductase	93.0	69.8	45.7
MGA_280	LOCUS_02660	sequence17:14626..14940(+)	partial			WP_011254380.1	sugar O-acetyltransferase	100.0	51.0	74.0
MGA_282	LOCUS_02680	sequence17:16775..17242(+)	frameshift		16790	WP_002321171.1	2-hydroxyacid dehydrogenase	94.2	45.9	41.8
MGA_284	LOCUS_02700	sequence17:18290..18424(+)	partial			WP_003547446.1	hypothetical protein	100.0	74.6	77.3
MGA_285	LOCUS_02710	sequence17:18545..18862(+)	internal_stop_codon	18422..18424(+)		WP_014565877.1	flavodoxin	94.3	27.3	72.8
MGA_288	LOCUS_02740	sequence17:22146..22442(+)	partial			WP_003548117.1	MFS transporter	61.2	15.3	66.7
MGA_289	LOCUS_02750	sequence17:22454..22786(+)	partial			WP_003548117.1	MFS transporter	90.0	25.8	55.4
MGA_311	LOCUS_02970	sequence17:37364..38071(+)	partial			WP_004255227.1	biotin--[acetyl-CoA-carboxylase] ligase	98.3	74.6	42.3
MGA_313	LOCUS_02990	sequence17:40377..40820(+)	partial			WP_011254202.1	Cof-type HAD-IIB family hydrolase	93.9	51.3	60.1
MGA_315	LOCUS_03010	sequence17:41845..42111(+)	partial			WP_011254318.1	YSIRK-type signal peptide-containing protein	67.0	2.6	42.4
MGA_321	LOCUS_03070	sequence17:46182..47234(+)	partial			WP_011476405.1	C39 family peptidase	67.7	26.8	44.4
MGA_324	LOCUS_03100	sequence18:998..1372(+)	partial			WP_011674878.1	DUF2075 domain-containing protein	95.2	28.9	50.8
MGA_327	LOCUS_03130	sequence18:5526..6668(-)	internal_stop_codon	6675..6677(-)		WP_003549250.1	amino acid permease	100.0	79.2	75.5
MGA_328	LOCUS_03140	sequence18:6675..6959(-)	internal_stop_codon	6675..6677(-)		WP_003549250.1	amino acid permease	97.9	19.2	90.2
MGA_346	LOCUS_03320	sequence18:22986..23555(+)	frameshift		23546	WP_003549289.1	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	99.5	25.4	89.9
MGA_347	LOCUS_03330	sequence18:23638..25200(+)	frameshift		23549	WP_003549289.1	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	100.0	69.9	85.6
MGA_356	LOCUS_03420	sequence18:31768..32574(-)	partial			WP_009966620.1	coupling conjugation protein ConQ	72.4	39.4	33.3
MGA_361	LOCUS_03460	sequence19:949..1500(-)	partial			WP_127742798.1	class III lanthionine synthetase LanKC	77.6	16.3	35.0
MGA_364	LOCUS_03490	sequence20:1860..2432(-)	frameshift		2487	WP_010932591.1	DEAD/DEAH box helicase family protein	84.2	16.0	38.5
MGA_370	LOCUS_03550	sequence20:8525..8728(-)	internal_stop_codon	8765..8767(-),8525..8527(-)		WP_011241777.1	recombinase family protein	100.0	34.5	98.5
MGA_371	LOCUS_03560	sequence20:9412..10104(+)	partial			WP_002289238.1	collagen-binding MSCRAMM adhesin Acm	52.2	16.2	42.6
MGA_375	LOCUS_03600	sequence20:13121..13291(+)	partial			WP_002287733.1	restriction endonuclease subunit S	80.4	10.9	77.8
MGA_378	LOCUS_03630	sequence21:1659..2411(+)	frameshift,internal_stop_codon	2695..2697(+)	2384	WP_117118503.1	IS3 family transposase	96.8	61.5	43.7
MGA_379	LOCUS_03640	sequence21:2380..2697(+)	frameshift,internal_stop_codon	2695..2697(+)	2384	WP_154549573.1	IS3 family transposase	97.1	24.0	68.6
MGA_381	LOCUS_03650	sequence22:305..424(+)	frameshift,internal_stop_codon	422..424(+)	565	WP_011476479.1	branched-chain amino acid transport system II carrier protein	89.7	7.8	77.8
MGA_382	LOCUS_03660	sequence22:577..1056(+)	frameshift,internal_stop_codon	422..424(+)	1121,1259,1036,565	WP_011254324.1	branched-chain amino acid transport system II carrier protein	91.8	31.6	57.5
MGA_383	LOCUS_03670	sequence22:1345..1560(+)	frameshift		1120,1258,1348	WP_011254324.1	branched-chain amino acid transport system II carrier protein	91.5	14.3	53.8
MGA_384	LOCUS_03680	sequence22:1573..2319(-)	internal_stop_codon	2437..2439(-)		WP_003548560.1	LysR family transcriptional regulator	65.7	76.1	35.2
MGA_394	LOCUS_03780	sequence22:11677..12192(+)	partial			WP_011254029.1	MBL fold metallo-hydrolase	70.2	46.8	72.6
MGA_399	LOCUS_03830	sequence22:15408..15962(+)	partial			WP_011254066.1	SLAP domain-containing protein	89.1	34.8	41.5
MGA_407	LOCUS_03910	sequence23:2312..2866(-)	frameshift		2320	WP_015613420.1	GHKL domain-containing protein	97.3	54.9	51.4
MGA_412	LOCUS_03960	sequence23:6096..6593(+)	frameshift		6539	WP_003548446.1	hypothetical protein	98.8	73.0	41.2
MGA_417	LOCUS_04010	sequence23:10993..11145(+)	partial			WP_003706303.1	teichoic acid D-Ala incorporation-associated protein DltX	68.0	69.4	67.6
MGA_431	LOCUS_04150	sequence24:4706..5032(+)	partial			WP_050340461.1	site-specific integrase	86.1	47.7	69.9
MGA_433	LOCUS_04170	sequence24:6668..7291(-)	partial			WP_003549732.1	CPBP family intramembrane metalloprotease	94.7	49.2	35.0
MGA_438	LOCUS_04220	sequence24:11693..12130(-)	partial			WP_010957047.1	carbon-nitrogen hydrolase family protein	97.9	47.5	65.5
MGA_439	LOCUS_04230	sequence24:12219..12419(-)	partial			WP_002679543.1	carbon-nitrogen hydrolase family protein	93.9	21.0	48.4
MGA_440	LOCUS_04240	sequence24:12429..12656(-)	partial			WP_003547296.1	SLAP domain-containing protein	94.7	17.9	60.6
MGA_445	LOCUS_04290	sequence24:18524..18709(-)	frameshift		18747	WP_011101819.1	homoserine O-succinyltransferase	95.1	19.9	48.3
MGA_446	LOCUS_04300	sequence24:18788..19039(-)	frameshift		18829	WP_011254509.1	FMN-dependent dehydrogenase	95.2	23.2	62.0
MGA_449	LOCUS_04330	sequence24:22099..22614(-)	internal_stop_codon	22627..22629(-)		WP_003641095.1	RNA degradosome polyphosphate kinase	77.2	18.5	66.2
MGA_450	LOCUS_04340	sequence24:22627..24288(-)	internal_stop_codon	22627..22629(-)		WP_003641095.1	RNA degradosome polyphosphate kinase	97.3	74.9	62.2
MGA_452	LOCUS_04360	sequence24:26006..26260(-)	partial			WP_003549915.1	hypothetical protein	88.1	23.6	52.7
MGA_453	LOCUS_04370	sequence24:26476..26607(-)	partial			WP_003547891.1	oligopeptide ABC transporter substrate-binding protein	90.7	6.6	64.1
MGA_456	LOCUS_04400	sequence24:28685..28951(+)	frameshift,internal_stop_codon	28940..28942(+)	28891	WP_052846195.1	sulfite exporter TauE/SafE family protein	65.9	22.4	48.3
MGA_459	LOCUS_04430	sequence24:30150..30383(-)	frameshift		30206	WP_003547349.1	DUF6176 family protein	76.6	49.6	67.8
MGA_461	LOCUS_04450	sequence24:31168..31440(-)	frameshift		31128,31257,31423	WP_034532906.1	kinase	61.1	33.7	67.3
MGA_467	LOCUS_04510	sequence24:38201..38815(-)	frameshift		38864	WP_003550020.1	peptide ABC transporter substrate-binding protein	100.0	37.4	77.5
MGA_468	LOCUS_04520	sequence24:38853..39845(-)	frameshift		38870	WP_003550020.1	peptide ABC transporter substrate-binding protein	99.1	59.7	77.1
MGA_471	LOCUS_04550	sequence24:40992..41201(+)	partial			WP_003549308.1	AAC(3) family N-acetyltransferase	72.5	18.2	70.0
MGA_477	LOCUS_04610	sequence24:44695..45576(+)	frameshift		44624,44585,45497	WP_003549562.1	amino acid permease	91.1	59.5	80.1
MGA_478	LOCUS_04620	sequence24:45557..45715(+)	frameshift		45495	WP_003549562.1	amino acid permease	92.3	10.7	64.6
MGA_482	LOCUS_04660	sequence24:47614..47904(+)	partial			WP_011254394.1	GNAT family N-acetyltransferase	90.6	58.8	54.0
MGA_483	LOCUS_04670	sequence24:48067..48411(+)	partial			WP_106663664.1	SDR family oxidoreductase	86.8	39.8	43.4
MGA_490	LOCUS_04740	sequence24:53598..53798(-)	partial			WP_002385631.1	potassium channel family protein	83.3	22.7	45.5
MGA_502	LOCUS_04860	sequence25:13883..14341(-)	frameshift		14307	WP_011254608.1	GMP reductase	92.1	42.4	90.0
MGA_503	LOCUS_04870	sequence25:14281..14877(-)	frameshift		14307	WP_011254608.1	GMP reductase	99.0	58.5	87.8
MGA_508	LOCUS_04920	sequence25:19262..19414(+)	frameshift,internal_stop_codon	19412..19414(+)	19691,19636	WP_003549600.1	DMT family transporter	98.0	15.9	73.5
MGA_512	LOCUS_04960	sequence25:23193..23384(+)	partial			WP_003548701.1	helix-turn-helix transcriptional regulator	100.0	23.4	38.1
MGA_523	LOCUS_05050	sequence26:6144..6680(+)	partial			WP_011100975.1	DUF2075 domain-containing protein	93.8	41.5	42.5
MGA_526	LOCUS_05070	sequence27:717..1262(+)	partial			WP_011102090.1	SDR family oxidoreductase	70.7	50.9	32.2
MGA_530	LOCUS_05110	sequence27:2828..3199(+)	frameshift		3193	WP_003547344.1	NUDIX hydrolase	98.4	58.5	70.2
MGA_531	LOCUS_05120	sequence27:3210..3452(+)	frameshift		3193	WP_003547344.1	NUDIX hydrolase	100.0	38.6	62.5
MGA_554	LOCUS_05330	sequence28:22178..22366(+)	internal_stop_codon	21995..21997(+),22142..22144(+),22136..22138(+),22364..22366(+),22385..22387(+)		WP_003546985.1	HAD-IC family P-type ATPase	100.0	7.8	61.9
MGA_555	LOCUS_05340	sequence28:22400..23575(+)	internal_stop_codon	22364..22366(+),22385..22387(+)		WP_003546985.1	HAD-IC family P-type ATPase	99.7	48.4	73.6
MGA_562	LOCUS_05410	sequence28:29837..30682(+)	internal_stop_codon	30680..30682(+)		WP_011254524.1	Rib/alpha-like domain-containing protein	98.9	16.2	31.2
MGA_579	LOCUS_05580	sequence28:44460..44642(+)	internal_stop_codon	44640..44642(+),44421..44423(+)		WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	23.6	44.3
MGA_580	LOCUS_05590	sequence28:44646..45074(+)	internal_stop_codon	44640..44642(+),44421..44423(+)		WP_011475480.1	Rpn family recombination-promoting nuclease/putative transposase	84.5	48.0	29.5
MGA_595	LOCUS_05730	sequence31:4839..5141(-)	partial			WP_011948690.1	FAD-binding oxidoreductase	94.0	20.2	50.0
MGA_596	LOCUS_05740	sequence31:5216..5566(+)	frameshift		5530	WP_011254465.1	MDR family MFS transporter	94.0	22.2	88.1
MGA_597	LOCUS_05750	sequence31:5536..6171(+)	frameshift,internal_stop_codon	6170..6172(+)	5530,6358	WP_011254465.1	MDR family MFS transporter	99.5	42.9	88.1
MGA_598	LOCUS_05760	sequence31:6175..6375(+)	frameshift,internal_stop_codon	6169..6171(+)	6357	WP_011254465.1	MDR family MFS transporter	98.5	13.3	86.2
MGA_599	LOCUS_05770	sequence31:6372..6686(+)	frameshift,internal_stop_codon	6169..6171(+)	6360	WP_011254465.1	MDR family MFS transporter	99.0	21.0	89.3
MGA_601	LOCUS_05790	sequence31:7281..10553(-)	partial			WP_007058870.1	DEAD/DEAH box helicase	68.0	59.3	38.1
MGA_605	LOCUS_05830	sequence31:13914..14423(-)	internal_stop_codon	14466..14468(-)		WP_003547186.1	serine hydrolase	50.9	23.9	58.6
MGA_606	LOCUS_05840	sequence31:14466..14789(-)	internal_stop_codon	14466..14468(-)		WP_003547186.1	serine hydrolase	74.8	22.0	56.2
MGA_612	LOCUS_05900	sequence31:21184..22452(+)	partial			WP_000145511.1	replication initiation protein	50.9	73.1	30.4
MGA_619	LOCUS_05970	sequence31:28579..28803(+)	internal_stop_codon	28801..28803(+)		WP_003547989.1	alpha/beta hydrolase	94.6	23.5	61.4
MGA_620	LOCUS_05980	sequence31:28846..29475(+)	internal_stop_codon	28801..28803(+)		WP_003547989.1	alpha/beta hydrolase	100.0	69.8	55.2
MGA_626	LOCUS_06040	sequence31:34343..34945(+)	internal_stop_codon	34250..34252(+)		WP_003549462.1	Cof-type HAD-IIB family hydrolase	99.5	76.3	43.8
MGA_628	LOCUS_06060	sequence31:36904..37926(+)	internal_stop_codon	37924..37926(+)		WP_011254634.1	peptide ABC transporter substrate-binding protein	100.0	62.5	85.0
MGA_629	LOCUS_06070	sequence31:37927..38535(+)	internal_stop_codon	37924..37926(+)		WP_011254634.1	peptide ABC transporter substrate-binding protein	99.0	36.9	85.0
MGA_640	LOCUS_06180	sequence31:49308..49490(+)	frameshift		49487	WP_003546204.1	peptidoglycan-binding protein	56.7	14.7	82.4
MGA_643	LOCUS_06210	sequence31:51850..52683(+)	partial			WP_003644407.1	lipoprotein	76.9	73.8	36.9
MGA_645	LOCUS_06230	sequence31:53544..53819(+)	partial			WP_011254095.1	hypothetical protein	67.0	67.7	47.8
MGA_646	LOCUS_06240	sequence31:53842..54765(-)	partial			WP_003547408.1	DNA/RNA non-specific endonuclease	63.5	69.4	64.6
MGA_649	LOCUS_06270	sequence31:57079..57297(+)	internal_stop_codon	57295..57297(+)		WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	88.9	13.8	57.8
MGA_650	LOCUS_06280	sequence31:57343..57720(+)	frameshift,internal_stop_codon	57974..57976(+),57295..57297(+)	57675	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	60.0	16.2	44.0
MGA_651	LOCUS_06290	sequence31:57692..57976(+)	frameshift,internal_stop_codon	57974..57976(+)	57675	WP_011101592.1	DHA2 family efflux MFS transporter permease subunit	97.9	19.8	38.0
MGA_656	LOCUS_06340	sequence31:62056..62448(+)	internal_stop_codon	62017..62019(+)		WP_003547397.1	L,D-transpeptidase	97.7	62.9	75.6
MGA_662	LOCUS_06400	sequence31:66462..67130(+)	partial			WP_003549951.1	hypothetical protein	90.5	57.6	33.7
MGA_666	LOCUS_06420	sequence32:204..404(-)	frameshift		448	WP_003549336.1	DegV family protein	98.5	21.0	67.7
MGA_667	LOCUS_06430	sequence32:323..877(-)	frameshift		448	WP_003549336.1	DegV family protein	76.6	45.6	70.9
MGA_681	LOCUS_06560	sequence33:14633..15877(-)	internal_stop_codon	15878..15880(-)		WP_003549932.1	glucose PTS transporter subunit IIA	98.1	60.3	77.6
MGA_682	LOCUS_06570	sequence33:15878..16111(-)	internal_stop_codon	15878..15880(-)		WP_003549932.1	glucose PTS transporter subunit IIA	98.7	11.5	65.8
MGA_689	LOCUS_06640	sequence33:24792..25124(-)	internal_stop_codon	25164..25166(-)		WP_003549441.1	CopY/TcrY family copper transport repressor	100.0	75.3	70.9
MGA_702	LOCUS_06770	sequence33:38327..39127(-)	partial			WP_011254625.1	YdcF family protein	100.0	72.5	60.9
MGA_723	LOCUS_06980	sequence34:18275..18736(-)	frameshift,internal_stop_codon	18800..18802(-)	18286	WP_003547855.1	uracil-DNA glycosylase	98.0	68.5	72.0
MGA_747	LOCUS_07220	sequence34:42811..43008(-)	frameshift		42946	WP_003547912.1	hypothetical protein	90.8	58.4	59.3
MGA_748	LOCUS_07230	sequence34:42902..43117(-)	frameshift		42946	WP_003547912.1	hypothetical protein	98.6	69.3	55.7
MGA_772	LOCUS_07470	sequence34:63527..63931(-)	partial			WP_003547954.1	YitT family protein	92.5	44.6	62.4
MGA_776	LOCUS_07510	sequence34:66398..66901(-)	internal_stop_codon	66920..66922(-)		WP_011101349.1	accessory Sec system glycosyltransferase Asp1	93.4	30.5	40.4
MGA_789	LOCUS_07640	sequence34:81179..81550(+)	frameshift		81506,81143	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	93.5	25.7	67.0
MGA_790	LOCUS_07650	sequence34:81525..82313(+)	frameshift		81505	WP_011254446.1	ClC family H(+)/Cl(-) exchange transporter	99.6	58.3	66.3
MGA_813	LOCUS_07880	sequence34:103113..104255(+)	partial			WP_003548276.1	YfhO family protein	98.4	44.0	39.4
MGA_842	LOCUS_08170	sequence34:131587..132159(+)	internal_stop_codon	132157..132159(+)		WP_004270929.1	IS30 family transposase	94.2	53.9	40.0
MGA_843	LOCUS_08180	sequence34:132226..132489(+)	frameshift,internal_stop_codon	132157..132159(+)	132483	WP_010956682.1	IS30-like element ISTde2 family transposase	98.9	25.7	43.5
MGA_847	LOCUS_08220	sequence34:135118..136374(-)	internal_stop_codon	136381..136383(-)		WP_002352327.1	FAD-dependent oxidoreductase	95.0	83.9	30.0
MGA_849	LOCUS_08240	sequence34:136611..137552(-)	partial			WP_179238099.1	FAD-binding protein	77.0	38.5	34.4
MGA_854	LOCUS_08290	sequence34:140837..141244(-)	partial			WP_011705524.1	LysR family transcriptional regulator	67.4	30.9	31.9
MGA_855	LOCUS_08300	sequence34:141288..144740(-)	partial			WP_000401853.1	helicase-related protein	73.1	80.3	24.3
MGA_856	LOCUS_08310	sequence34:144740..148216(-)	partial			WP_010891879.1	Eco57I restriction-modification methylase domain-containing protein	58.2	58.7	26.3
MGA_860	LOCUS_08350	sequence34:151790..152920(-)	partial			WP_003548356.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	95.7	70.2	95.8
MGA_862	LOCUS_08370	sequence34:154680..155366(-)	frameshift		155401,155606	WP_011254010.1	C69 family dipeptidase	98.7	51.5	75.0
MGA_863	LOCUS_08380	sequence34:155583..155741(-)	frameshift		155401,155606	WP_011254010.1	C69 family dipeptidase	86.5	9.7	95.6
MGA_887	LOCUS_08620	sequence34:178849..178989(-)	frameshift		178860	WP_003548490.1	cupin domain-containing protein	78.3	26.3	75.0
MGA_901	LOCUS_08740	sequence36:3250..3786(-)	partial			WP_011476472.1	mannitol-1-phosphate 5-dehydrogenase	96.6	44.5	73.3
MGA_902	LOCUS_08750	sequence36:3687..5594(-)	frameshift		5657,5579	WP_011476476.1	helix-turn-helix domain-containing protein	92.1	84.9	48.7
MGA_918	LOCUS_08910	sequence36:20139..20489(-)	frameshift		20505,20598	WP_011254542.1	GNAT family N-acetyltransferase	100.0	62.0	65.5
MGA_924	LOCUS_08970	sequence36:26564..26794(-)	frameshift,internal_stop_codon	26820..26822(-)	26801	WP_012775361.1	membrane protein	96.1	13.2	36.8
MGA_933	LOCUS_09060	sequence37:2625..2819(-)	partial			WP_003564982.1	membrane protein insertion efficiency factor YidD	75.0	47.5	72.9
MGA_942	LOCUS_09150	sequence37:9815..10039(-)	partial			WP_029779745.1	F0F1 ATP synthase subunit C	74.3	74.3	76.4
MGA_953	LOCUS_09260	sequence37:21022..21309(-)	partial			WP_011254238.1	VanZ family protein	92.6	44.0	69.3
MGA_973	LOCUS_09460	sequence38:1820..1966(+)	partial			WP_003549428.1	SPJ_0845 family protein	58.3	57.1	85.7
MGA_996	LOCUS_09690	sequence38:26771..27172(+)	frameshift		26696,27137	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	91.0	38.4	59.5
MGA_997	LOCUS_09700	sequence38:27190..27519(+)	frameshift		27136	WP_003546833.1	YegS/Rv2252/BmrU family lipid kinase	98.2	34.0	59.8
MGA_1014	LOCUS_09870	sequence38:42422..42703(-)	partial			WP_010906174.1	YggT family protein	75.3	72.5	42.9
MGA_1035	LOCUS_10080	sequence38:63008..63529(-)	frameshift		63531,63598	WP_003546764.1	pseudouridine synthase	100.0	73.3	68.2
MGA_1036	LOCUS_10090	sequence38:63566..63718(-)	frameshift		63531,63598	WP_003546764.1	pseudouridine synthase	80.0	16.9	77.5
MGA_1048	LOCUS_10200	sequence39:4173..4625(-)	frameshift		4629	WP_003548818.1	glycerol-3-phosphate acyltransferase	100.0	73.2	68.0
MGA_1049	LOCUS_10210	sequence39:4555..4788(-)	frameshift		4629	WP_003548818.1	glycerol-3-phosphate acyltransferase	68.8	25.9	75.5
MGA_1059	LOCUS_10310	sequence39:14335..14901(+)	partial			WP_011254065.1	pore-forming S-layer protein SlpA	73.9	34.0	40.1
MGA_1069	LOCUS_10400	sequence40:5345..5521(+)	frameshift,internal_stop_codon	5519..5521(+)	5653	WP_011254026.1	IS1182 family transposase	98.3	10.0	63.2
MGA_1070	LOCUS_10410	sequence40:5525..5716(+)	frameshift,internal_stop_codon	5519..5521(+)	5653	WP_011254026.1	IS1182 family transposase	82.5	9.2	50.0
MGA_1071	LOCUS_10420	sequence40:5652..6038(+)	frameshift,internal_stop_codon	5519..5521(+),6025..6027(+)	6060,5653	WP_011254026.1	IS1182 family transposase	50.8	11.4	78.5
MGA_1096	LOCUS_10670	sequence40:30765..31295(+)	partial			WP_003549794.1	DeoR/GlpR family DNA-binding transcription regulator	77.3	54.2	77.9
MGA_1155	LOCUS_11250	sequence41:54021..54698(+)	internal_stop_codon	53814..53816(+)		WP_011476411.1	glutamate/gamma-aminobutyrate family transporter YjeM	67.6	30.6	58.6
MGA_1168	LOCUS_11380	sequence41:67055..67936(+)	frameshift		67915	WP_011254206.1	amino acid permease	98.0	66.1	82.9
MGA_1169	LOCUS_11390	sequence41:67930..68379(+)	frameshift		67915	WP_011254206.1	amino acid permease	91.3	31.3	80.1
MGA_1172	LOCUS_11420	sequence41:70531..70902(-)	frameshift		70879	WP_003546429.1	nitroreductase	95.1	53.7	73.5
MGA_1173	LOCUS_11430	sequence41:70877..71188(-)	frameshift		70879	WP_003546429.1	nitroreductase	100.0	47.2	67.0
MGA_1182	LOCUS_11520	sequence41:81050..81217(+)	frameshift,internal_stop_codon	80849..80851(+),81216..81218(+)	80953,80770	WP_003546400.1	DeoR/GlpR family DNA-binding transcription regulator	100.0	21.7	43.6
MGA_1196	LOCUS_11660	sequence41:93015..93401(-)	frameshift		93059	WP_003546364.1	ECF transporter S component	96.1	64.1	79.7
MGA_1197	LOCUS_11670	sequence41:93579..93764(-)	partial			WP_011254194.1	ABC transporter ATP-binding protein	100.0	10.4	86.9
MGA_1201	LOCUS_11710	sequence41:97440..97787(-)	internal_stop_codon	97872..97874(-)		WP_012775247.1	DUF3955 domain-containing protein	99.1	72.8	48.7
MGA_1207	LOCUS_11770	sequence41:103387..104373(+)	internal_stop_codon	104371..104373(+)		WP_010774201.1	site-specific DNA-methyltransferase	74.1	66.1	41.9
MGA_1222	LOCUS_11920	sequence41:116460..116909(-)	frameshift		116950	WP_009550763.1	hypothetical protein	100.0	80.5	96.6
MGA_1224	LOCUS_11940	sequence41:118753..118989(-)	frameshift		118988	WP_003547510.1	adenylate kinase	98.7	47.2	49.4
MGA_1225	LOCUS_11950	sequence41:118983..119237(-)	frameshift		118988	WP_003547510.1	adenylate kinase	98.8	51.5	60.7
MGA_1240	LOCUS_12100	sequence41:136373..138394(-)	frameshift		138411	WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	99.6	75.3	82.2
MGA_1241	LOCUS_12110	sequence41:138409..139035(-)	frameshift		138411	WP_003546265.1	calcium-translocating P-type ATPase, PMCA-type	99.5	23.4	80.3
MGA_1250	LOCUS_12200	sequence41:147972..148199(-)	partial			WP_011475674.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	60.0	11.5	84.4
MGA_1255	LOCUS_12250	sequence41:151179..152030(-)	partial			WP_003546206.1	SEC10/PgrA surface exclusion domain-containing protein	92.2	71.8	61.7
MGA_1262	LOCUS_12320	sequence41:155598..156008(+)	partial			WP_010905975.1	phosphate-starvation-inducible protein PsiE	72.1	68.5	39.8
MGA_1267	LOCUS_12370	sequence41:159641..160141(+)	partial			WP_111723554.1	IS3-like element ISHin1 family transposase	65.1	23.8	51.9
MGA_1268	LOCUS_12380	sequence41:160145..161524(-)	partial			WP_011254515.1	YSIRK-type signal peptide-containing protein	68.8	38.2	24.2
MGA_1270	LOCUS_12400	sequence41:164352..164792(+)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	94.5	33.1	31.7
MGA_1273	LOCUS_12430	sequence41:166082..167074(+)	frameshift		167002,167062	WP_165492900.1	IS3 family transposase	75.5	62.5	59.1
MGA_1274	LOCUS_12440	sequence41:167064..167411(+)	frameshift		167002,167062	WP_165492900.1	IS3 family transposase	100.0	28.5	79.1
MGA_1276	LOCUS_12460	sequence41:168319..168612(-)	frameshift		168614	WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	90.7	20.5	45.4
MGA_1277	LOCUS_12470	sequence41:168516..168722(-)	frameshift		168614	WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	48.5	7.2	66.7
MGA_1280	LOCUS_12500	sequence41:170730..171107(-)	frameshift,internal_stop_codon	171153..171155(-),171237..171239(-),171372..171374(-)	171381	WP_011475588.1	ABC transporter ATP-binding protein	85.6	18.4	58.9
MGA_1281	LOCUS_12510	sequence41:171522..171785(-)	frameshift,internal_stop_codon	171234..171236(-)	171368,171380,171575	WP_010905248.1	ABC transporter ATP-binding protein	78.2	11.1	50.0
MGA_1287	LOCUS_12570	sequence41:177931..178842(+)	internal_stop_codon	178840..178842(+)		WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	100.0	54.9	91.1
MGA_1288	LOCUS_12580	sequence41:178894..179589(+)	internal_stop_codon	178840..178842(+)		WP_003546143.1	phosphoenolpyruvate carboxykinase (ATP)	100.0	41.8	92.2
MGA_1289	LOCUS_12590	sequence41:179680..180039(-)	frameshift		180050	WP_011254163.1	carboxymuconolactone decarboxylase family protein	100.0	49.0	75.6
MGA_1290	LOCUS_12600	sequence41:180048..180401(-)	frameshift		180050	WP_011254163.1	carboxymuconolactone decarboxylase family protein	100.0	48.1	82.1
MGA_1293	LOCUS_12630	sequence41:184986..185414(+)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	91.5	32.1	32.6
MGA_1294	LOCUS_12640	sequence41:185500..186069(-)	frameshift		186100	WP_011101842.1	ROK family protein	94.2	55.0	45.3
MGA_1295	LOCUS_12650	sequence41:186086..186466(-)	frameshift		186100	WP_011948840.1	ROK family protein	90.5	36.1	50.9
MGA_1309	LOCUS_12790	sequence43:1092..1913(-)	frameshift		2032	WP_003550081.1	zinc ribbon domain-containing protein	99.6	78.7	53.5
MGA_1310	LOCUS_12800	sequence43:1910..2140(-)	frameshift		2032	WP_003550081.1	zinc ribbon domain-containing protein	44.7	9.8	76.5
MGA_1313	LOCUS_12830	sequence43:6509..6802(-)	frameshift		6791	WP_011254527.1	serine hydrolase	94.8	29.6	54.3
MGA_1314	LOCUS_12840	sequence43:6690..7454(-)	frameshift		6791	WP_011254527.1	serine hydrolase	87.0	70.4	48.4
MGA_1325	LOCUS_12950	sequence43:18370..18609(-)	partial			WP_003550051.1	DUF421 domain-containing protein	84.8	31.6	65.7
MGA_1326	LOCUS_12960	sequence43:18593..18781(-)	partial			WP_003550049.1	DUF3290 domain-containing protein	98.4	46.3	55.1
MGA_1328	LOCUS_12980	sequence43:20187..20669(-)	partial			WP_003550047.1	LPXTG cell wall anchor domain-containing protein	93.8	16.4	37.8
MGA_1331	LOCUS_13010	sequence43:23241..23570(-)	internal_stop_codon	23660..23662(-)		WP_011254534.1	ABC transporter ATP-binding protein	97.2	19.9	83.0
MGA_1332	LOCUS_13020	sequence43:23749..23946(-)	internal_stop_codon	23660..23662(-)		WP_011254534.1	ABC transporter ATP-binding protein	87.7	10.7	87.7
MGA_1335	LOCUS_13050	sequence43:26150..26332(+)	partial			WP_003550031.1	response regulator transcription factor	100.0	25.8	90.0
MGA_1336	LOCUS_13060	sequence43:26437..26691(-)	partial			WP_003550021.1	GNAT family N-acetyltransferase	51.2	25.1	67.4
MGA_1342	LOCUS_13120	sequence43:29641..29877(-)	partial			WP_003550005.1	amino acid ABC transporter substrate-binding protein	100.0	28.7	73.1
MGA_1346	LOCUS_13160	sequence43:34445..35023(-)	partial			WP_006586260.1	ABC transporter permease	78.6	24.7	49.0
MGA_1348	LOCUS_13180	sequence43:35214..35822(+)	partial			WP_003549985.1	hypothetical protein	73.8	64.9	55.7
MGA_1363	LOCUS_13310	sequence46:1064..1345(-)	partial			WP_003549870.1	DUF4422 domain-containing protein	89.2	32.3	83.1
MGA_1367	LOCUS_13350	sequence46:3631..4047(-)	frameshift		4148	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	100.0	49.1	65.0
MGA_1368	LOCUS_13360	sequence46:4113..4493(-)	frameshift		4148	WP_003549864.1	Wzz/FepE/Etk N-terminal domain-containing protein	88.9	38.8	70.8
MGA_1372	LOCUS_13400	sequence46:8550..8942(-)	partial			WP_003549854.1	C40 family peptidase	55.4	29.0	51.3
MGA_1379	LOCUS_13470	sequence46:13064..13408(+)	partial			WP_011254563.1	ribonucleotide-diphosphate reductase subunit beta	46.5	17.0	54.7
MGA_1387	LOCUS_13550	sequence46:19760..19930(-)	partial			WP_013853658.1	FAD-dependent oxidoreductase	98.2	13.9	60.7
MGA_1388	LOCUS_13560	sequence46:20093..20674(-)	frameshift,internal_stop_codon	20720..20722(-)	20738	WP_015943875.1	DUF554 domain-containing protein	96.4	82.2	49.5
MGA_1396	LOCUS_13630	sequence47:3977..4261(+)	partial			WP_068990772.1	IS66-like element short variant transposase	100.0	21.1	69.5
MGA_1401	LOCUS_13670	sequence48:355..576(+)	internal_stop_codon	298..300(+)		WP_165492900.1	IS3 family transposase	100.0	18.1	63.0
MGA_1405	LOCUS_13700	sequence49:355..576(+)	internal_stop_codon	298..300(+)		WP_165694720.1	IS3-like element IS861 family transposase	95.9	15.6	64.3
MGA_1414	LOCUS_13790	sequence49:5850..6035(-)	frameshift,internal_stop_codon	6050..6052(-)	6292	WP_015613420.1	GHKL domain-containing protein	91.8	17.1	66.1
MGA_1415	LOCUS_13800	sequence49:6051..6260(-)	frameshift,internal_stop_codon	6050..6052(-)	6298	WP_015613420.1	GHKL domain-containing protein	100.0	22.0	59.7
MGA_1416	LOCUS_13810	sequence49:6266..7201(-)	frameshift,internal_stop_codon	6050..6052(-)	6298	WP_015613420.1	GHKL domain-containing protein	56.3	53.4	45.7
MGA_1427	LOCUS_13920	sequence49:19118..19567(-)	partial			WP_015613305.1	preprotein translocase subunit YajC	65.1	73.7	68.7
MGA_1459	LOCUS_14240	sequence49:49572..50024(-)	partial			WP_003549107.1	ion channel	98.0	55.3	39.7
MGA_1464	LOCUS_14290	sequence49:52739..53020(-)	frameshift		52989	WP_015613297.1	phosphate ABC transporter ATP-binding protein PstB	91.4	32.2	92.9
MGA_1465	LOCUS_14300	sequence49:52960..53529(-)	frameshift		52989	WP_015613297.1	phosphate ABC transporter ATP-binding protein PstB	93.7	67.0	83.6
MGA_1471	LOCUS_14360	sequence49:57802..58290(-)	frameshift		57822	WP_003549094.1	transcription termination/antitermination protein NusG	95.7	83.2	89.0
MGA_1489	LOCUS_14540	sequence49:73349..73558(-)	frameshift		73560,73256,73380	WP_003549071.1	sulfite exporter TauE/SafE family protein	81.2	22.2	48.2
MGA_1554	LOCUS_15190	sequence49:129588..129905(-)	frameshift		129963	WP_011254096.1	APC family permease	95.2	18.9	69.0
MGA_1555	LOCUS_15200	sequence49:129838..131130(-)	frameshift		129963	WP_011254096.1	APC family permease	90.5	73.4	84.1
MGA_1578	LOCUS_15430	sequence49:156118..156834(-)	internal_stop_codon	156982..156984(-),156877..156879(-)		WP_003548873.1	magnesium-translocating P-type ATPase	84.5	22.4	43.8
MGA_1588	LOCUS_15530	sequence49:164109..164564(-)	partial			WP_011101247.1	ISL3-like element ISP1 family transposase	93.4	33.8	31.7
MGA_1599	LOCUS_15640	sequence49:177917..178483(+)	partial			WP_003566887.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	60.1	37.2	36.3
MGA_1608	LOCUS_15710	sequence50:6251..6781(+)	frameshift,internal_stop_codon	6780..6782(+)	6217,6189,6295	WP_003547045.1	aldo/keto reductase	92.0	59.8	73.5
MGA_1610	LOCUS_15730	sequence50:7772..7903(+)	internal_stop_codon	7901..7903(+)		WP_011254294.1	2-hydroxyacid dehydrogenase family protein	100.0	13.4	74.4
MGA_1611	LOCUS_15740	sequence50:7904..8347(+)	internal_stop_codon	7901..7903(+)		WP_011254294.1	2-hydroxyacid dehydrogenase family protein	99.3	46.7	56.0
MGA_1612	LOCUS_15750	sequence50:8411..8734(-)	frameshift		8784	WP_015613351.1	amino acid permease	98.1	22.8	67.6
MGA_1613	LOCUS_15760	sequence50:8740..9795(-)	frameshift		8784	WP_015613351.1	amino acid permease	97.4	74.2	73.4
MGA_1614	LOCUS_15770	sequence50:10011..10301(-)	frameshift,internal_stop_codon	10353..10355(-),10002..10004(-)	10016,10043	WP_011254296.1	DedA family protein	90.6	42.6	62.1
MGA_1618	LOCUS_15810	sequence50:14754..16289(+)	internal_stop_codon	16287..16289(+)		WP_025015105.1	acyltransferase family protein	100.0	80.1	69.3
MGA_1619	LOCUS_15820	sequence50:16296..16670(+)	internal_stop_codon	16287..16289(+)		WP_025015105.1	acyltransferase family protein	100.0	19.4	73.4
MGA_1622	LOCUS_15850	sequence50:18423..18647(+)	partial			WP_003547057.1	lipopolysaccharide assembly protein LapA domain-containing protein	67.6	61.7	54.0
MGA_1647	LOCUS_16100	sequence50:42033..42302(+)	frameshift		42248	WP_003547129.1	sodium:proton antiporter	77.5	13.1	54.9
MGA_1648	LOCUS_16110	sequence50:42305..42721(+)	frameshift		42248	WP_003547129.1	sodium:proton antiporter	100.0	25.9	47.1
MGA_1649	LOCUS_16120	sequence50:42727..43257(+)	partial			WP_003547129.1	sodium:proton antiporter	99.4	32.8	58.3
MGA_1665	LOCUS_16280	sequence50:61315..61671(+)	frameshift		61644	WP_003547484.1	peptidylprolyl isomerase	93.2	55.3	74.5
MGA_1666	LOCUS_16290	sequence50:61676..61900(+)	frameshift		61644	WP_003547484.1	peptidylprolyl isomerase	100.0	37.2	71.6
MGA_1669	LOCUS_16320	sequence50:65094..65912(+)	frameshift		64990	WP_003548323.1	adenosine deaminase	99.6	80.5	57.6
MGA_1679	LOCUS_16420	sequence50:78285..78548(+)	partial			WP_003549336.1	DegV family protein	96.6	27.2	70.2
MGA_1684	LOCUS_16460	sequence51:7140..7598(-)	frameshift		7148	WP_011254154.1	TIGR01906 family membrane protein	98.7	74.3	71.3
MGA_1691	LOCUS_16530	sequence51:13367..13801(+)	internal_stop_codon	13799..13801(+),13337..13339(+)		WP_117118503.1	IS3 family transposase	92.4	31.6	41.6
MGA_1701	LOCUS_16620	sequence52:10878..11276(-)	frameshift		11326	WP_003547489.1	YoaK family protein	95.5	53.6	46.0
