{ "type": "genome", "identifier": "GCF_004362855.1", "organism": "Aquabacterium commune", "title": "Aquabacterium commune", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004362855.1", "bioproject": "PRJNA224116", "biosample": "SAMN10866316", "wgs_master": "SNXW00000000.1", "refseq_category": "reference genome", "taxid": "70586", "species_taxid": "70586", "organism_name": "Aquabacterium commune", "infraspecific_name": "strain=DSM 11901", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/22", "asm_name": "ASM436285v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_004362855.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/362/855/GCF_004362855.1_ASM436285v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4204494", "genome_size_ungapped": "4204303", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004362855.1-RS_2024_04_19", "annotation_date": "2024-04-19", "total_gene_count": "3742", "protein_coding_gene_count": "3634", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-03-22", "dateModified": "2019-03-22", "datePublished": "2019-03-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Aquabacterium commune" ], "sample_taxid": [ "70586" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ 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95, "status": "conclusive" }, { "organism_name": "Aquabacterium parvum", "strain": "strain=B6", "accession": "GCA_001447195.1", "taxid": 70584, "species_taxid": 70584, "relation_to_type": "type", "validated": true, "ani": 85.1001, "matched_fragments": 903, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquabacterium olei", "strain": "strain=NBRC 110486", "accession": "GCA_003100395.1", "taxid": 1296669, "species_taxid": 1296669, "relation_to_type": "type", "validated": true, "ani": 83.2679, "matched_fragments": 764, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquabacterium soli", "strain": "strain=SJQ9", "accession": "GCA_003933735.1", "taxid": 2493092, "species_taxid": 2493092, "relation_to_type": "type", "validated": true, "ani": 82.8485, "matched_fragments": 768, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquabacterium lacunae", 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"GCA_002933415.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 79.8658, "matched_fragments": 521, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus hippei", "strain": "strain=DSM 566", "accession": "GCA_003201595.1", "taxid": 744406, "species_taxid": 744406, "relation_to_type": "type", "validated": true, "ani": 79.8596, "matched_fragments": 553, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_015476235.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 79.7954, "matched_fragments": 537, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus natans", "strain": "strain=ATCC 13338", "accession": "GCA_900156335.1", "taxid": 34103, "species_taxid": 34103, "relation_to_type": "type", "validated": true, "ani": 79.7771, "matched_fragments": 525, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus natans subsp. natans", "strain": "strain=DSM 6575", "accession": "GCA_000689195.1", "taxid": 882627, "species_taxid": 34103, "relation_to_type": "type", "validated": true, "ani": 79.7722, "matched_fragments": 500, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus sulfidivorans", "strain": "strain=D-501", "accession": "GCA_013426975.1", "taxid": 639200, "species_taxid": 639200, "relation_to_type": "type", "validated": true, "ani": 79.6723, "matched_fragments": 511, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella benzenivorans", "strain": "strain=B7", "accession": "GCA_020387415.1", "taxid": 2831643, "species_taxid": 2831643, "relation_to_type": "type", "validated": 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"total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga palleronii", "strain": "strain=NBRC 102513", "accession": "GCA_001571225.1", "taxid": 65655, "species_taxid": 65655, "relation_to_type": "type", "validated": true, "ani": 79.1112, "matched_fragments": 450, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella paludis", "strain": "strain=KCTC 32238", "accession": "GCA_018069865.1", "taxid": 1233411, "species_taxid": 1233411, "relation_to_type": "type", "validated": true, "ani": 78.8075, "matched_fragments": 370, "total_fragments": 1383, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter alkalitolerans", "strain": "strain=KACC 19305", "accession": "GCA_016722765.1", "taxid": 2039631, "species_taxid": 2039631, "relation_to_type": "type", "validated": true, "ani": 78.4956, "matched_fragments": 417, "total_fragments": 1383, "ani_threshold": 95, 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