{ "type": "genome", "identifier": "GCF_004364175.1", "organism": "Maribacter caenipelagi", "title": "Maribacter caenipelagi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004364175.1", "bioproject": "PRJNA224116", "biosample": "SAMN09074795", "wgs_master": "SNZW00000000.1", "refseq_category": "reference genome", "taxid": "1447781", "species_taxid": "1447781", "organism_name": "Maribacter caenipelagi", "infraspecific_name": "strain=CECT 8455", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/22", "asm_name": "ASM436417v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_004364175.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/364/175/GCF_004364175.1_ASM436417v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4281860", "genome_size_ungapped": "4280946", "gc_percent": "35.000000", "replicon_count": "0", "scaffold_count": "20", "contig_count": "20", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004364175.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3794", "protein_coding_gene_count": "3732", "non_coding_gene_count": "43", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-03-22", "dateModified": "2019-03-22", "datePublished": "2019-03-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Maribacter caenipelagi" ], "sample_taxid": [ "1447781" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Maribacter litoralis", "strain": "strain=SDRB-Phe2", "accession": "GCA_003075045.1", "taxid": 2059726, "species_taxid": 2059726, "relation_to_type": "type", "validated": true, "ani": 83.8993, "matched_fragments": 991, "total_fragments": 1418, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter stanieri", "strain": "strain=DSM 19891", "accession": "GCA_900112245.1", "taxid": 440514, "species_taxid": 440514, "relation_to_type": "type", "validated": true, "ani": 83.2998, "matched_fragments": 1002, "total_fragments": 1418, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter ulvicola", "strain": "strain=DSM 15366", "accession": "GCA_900155985.1", "taxid": 228959, "species_taxid": 228959, "relation_to_type": "type", "validated": true, "ani": 83.1818, "matched_fragments": 978, "total_fragments": 1418, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hyunsoonleella 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"min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000744105.1", "gtdb_species": "s__Maribacter forsetii", "ani": 85.4094, "matched_fragments": 1062, "total_fragments": 1418, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003075045.1", "gtdb_species": "s__Maribacter litoralis", "ani": 83.9089, "matched_fragments": 990, "total_fragments": 1418, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.43", "min_intra_species_ani": "97.43", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", 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"psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Maribacter", "caenipelagi" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }