{ "type": "genome", "identifier": "GCF_004367585.1", "organism": "Paenisporosarcina antarctica", "title": "Paenisporosarcina antarctica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Dalian University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004367585.1", "bioproject": "PRJNA224116", "biosample": "SAMN11164061", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "417367", "species_taxid": "417367", "organism_name": "Paenisporosarcina antarctica", "infraspecific_name": "strain=CGMCC 1.6503", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/03/22", "asm_name": "ASM436758v1", "asm_submitter": "Dalian University", "gbrs_paired_asm": "GCA_004367585.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/367/585/GCF_004367585.1_ASM436758v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3972524", "genome_size_ungapped": "3972524", "gc_percent": "37.000000", "replicon_count": "2", "scaffold_count": "2", "contig_count": "2", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004367585.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3816", "protein_coding_gene_count": "3671", "non_coding_gene_count": "97", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-03-22", "dateModified": "2019-03-22", "datePublished": "2019-03-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenisporosarcina antarctica" ], "sample_taxid": [ "417367" ], "sample_host_organism": [ "none" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica: Sea off King George Island" ], "sample_host_location_id": [], "data_size": "1.120 MB", "sample_ph_range": { "min": 6080.0, "max": 6080.0 }, "sample_temperature_range": { "min": 231718.0, "max": 231718.0 }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3972524", "Number of Sequences": "2", "Longest Sequences (bp)": "3897111", "N50 (bp)": "3897111", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.0", "Number of CDSs": "3771", "Average Protein Length": "284.1", "Coding Ratio (%)": "80.9", "Number of rRNAs": "28", "Number of tRNAs": "65", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Paenisporosarcina antarctica", "strain": "strain=CGMCC 1.6503", "accession": "GCA_004367585.1", "taxid": 417367, "species_taxid": 417367, "relation_to_type": "type", "validated": true, "ani": 100.0, 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