{ "tc_result": [ { "organism_name": "Pelotomaculum propionicicum", "strain": "strain=MGP", "accession": "GCA_004369225.1", "taxid": 258475, "species_taxid": 258475, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1234, "total_fragments": 1234, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pelotomaculum terephthalicicum", "strain": "strain=JT", "accession": "GCA_022410535.1", "taxid": 206393, "species_taxid": 206393, "relation_to_type": "type", "validated": true, "ani": 77.8689, "matched_fragments": 115, "total_fragments": 1234, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_004369225.1", "gtdb_species": "s__Pelotomaculum_B propionicicum", "ani": 100.0, "matched_fragments": 1234, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__Pelotomaculum_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.42", "min_intra_species_ani": "99.42", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_018435055.1", "gtdb_species": "s__Syntrophopropionicum sp018435055", "ani": 78.9371, "matched_fragments": 272, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__Syntrophopropionicum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.89", "min_intra_species_ani": "98.89", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002365855.1", "gtdb_species": "s__UBA3103 sp002365855", "ani": 78.6628, "matched_fragments": 137, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__UBA3103", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002402945.1", "gtdb_species": "s__Syntrophopropionicum sp002402945", "ani": 78.2056, "matched_fragments": 163, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__Syntrophopropionicum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000010565.1", "gtdb_species": "s__Pelotomaculum thermopropionicum", "ani": 77.641, "matched_fragments": 178, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__Pelotomaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.96", "min_intra_species_ani": "98.96", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002067965.1", "gtdb_species": "s__MVRN01 sp002067965", "ani": 77.3911, "matched_fragments": 72, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__MVRN01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002365865.1", "gtdb_species": "s__UBA3102 sp002365865", "ani": 76.8883, "matched_fragments": 65, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__UBA3102", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001512635.1", "gtdb_species": "s__DTU098 sp001512635", "ani": 76.7882, "matched_fragments": 120, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__DTU098", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.71", "min_intra_species_ani": "99.66", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009428905.1", "gtdb_species": "s__Desulfofundulus_A thermobenzoicus", "ani": 76.0274, "matched_fragments": 60, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Desulfovirgulaceae;g__Desulfofundulus_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.96", "min_intra_species_ani": "95.37", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001655685.1", "gtdb_species": "s__Desulfotomaculum_G copahuensis", "ani": 75.8812, "matched_fragments": 64, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Desulfovirgulaceae;g__Desulfotomaculum_G", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_000214705.1", "gtdb_species": "s__Desulfofundulus kuznetsovii", "ani": 75.7847, "matched_fragments": 54, "total_fragments": 1234, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Desulfovirgulaceae;g__Desulfofundulus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.21", "min_intra_species_ani": "97.21", "mean_intra_species_af": "0.77", "min_intra_species_af": "0.77", "num_clustered_genomes": 2, "status": "-" } ] }