{ "type": "genome", "identifier": "GCF_004745825.1", "organism": "Hymenobacter fodinae", "title": "Hymenobacter fodinae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_004745825.1", "bioproject": "PRJNA224116", "biosample": "SAMN10840453", "wgs_master": "SRLA00000000.1", "refseq_category": "reference genome", "taxid": "2510796", "species_taxid": "2510796", "organism_name": "Hymenobacter fodinae", "infraspecific_name": "strain=92R-1", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/04/08", "asm_name": "ASM474582v1", "asm_submitter": "Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology", "gbrs_paired_asm": "GCA_004745825.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/745/825/GCF_004745825.1_ASM474582v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6078776", "genome_size_ungapped": "6078776", "gc_percent": "56.500000", "replicon_count": "0", "scaffold_count": "15", "contig_count": "15", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_004745825.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "5260", "protein_coding_gene_count": "5188", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-04-08", "dateModified": "2019-04-08", "datePublished": "2019-04-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Hymenobacter fodinae" ], "sample_taxid": [ "2510796" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter guriensis", "strain": "strain=BT594", "accession": "GCA_015773195.1", "taxid": 2793065, "species_taxid": 2793065, "relation_to_type": "type", "validated": true, "ani": 79.6328, "matched_fragments": 759, "total_fragments": 2019, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter telluris", "strain": "strain=BT186", "accession": "GCA_017313265.1", "taxid": 2816474, "species_taxid": 2816474, "relation_to_type": "type", "validated": true, "ani": 79.4956, "matched_fragments": 877, "total_fragments": 2019, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter metallicola", "strain": "strain=9PBR-1", "accession": "GCA_004745645.1", "taxid": 2563114, "species_taxid": 2563114, "relation_to_type": "type", "validated": true, "ani": 79.3816, "matched_fragments": 805, "total_fragments": 2019, "ani_threshold": 95, "status": "below_threshold" } ], 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"min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013137895.1", "gtdb_species": "s__Hymenobacter sp013137895", "ani": 83.6059, "matched_fragments": 1287, "total_fragments": 2019, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900187375.1", "gtdb_species": "s__Hymenobacter gelipurpurascens", "ani": 81.9016, "matched_fragments": 1145, "total_fragments": 2019, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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