{
    "type": "genome",
    "identifier": "GCF_004765795.1",
    "organism": "Halorussus marinus",
    "title": "Halorussus marinus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Jiangsu University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_004765795.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10724292",
        "wgs_master": "SBIV00000000.1",
        "refseq_category": "na",
        "taxid": "2505976",
        "species_taxid": "2505976",
        "organism_name": "Halorussus marinus",
        "infraspecific_name": "strain=LYG-36",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/03/29",
        "asm_name": "ASM476579v1",
        "asm_submitter": "Jiangsu University",
        "gbrs_paired_asm": "GCA_004765795.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/765/795/GCF_004765795.1_ASM476579v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "3763720",
        "genome_size_ungapped": "3763700",
        "gc_percent": "67.000000",
        "replicon_count": "0",
        "scaffold_count": "37",
        "contig_count": "39",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004765795.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "3894",
        "protein_coding_gene_count": "3759",
        "non_coding_gene_count": "82",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-03-29",
    "dateModified": "2019-03-29",
    "datePublished": "2019-03-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Halorussus marinus"
        ],
        "sample_taxid": [
            "2505976"
        ],
        "sample_host_organism": [
            "Laminaria (salted brown alga)"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Lianyungang, Jiangsu Province"
        ],
        "sample_host_location_id": [],
        "data_size": "1.017 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3763720",
        "Number of Sequences": "37",
        "Longest Sequences (bp)": "756235",
        "N50 (bp)": "365638",
        "Gap Ratio (%)": "0.000531",
        "GCcontent (%)": "66.9",
        "Number of CDSs": "3787",
        "Average Protein Length": "291.4",
        "Coding Ratio (%)": "88.0",
        "Number of rRNAs": "4",
        "Number of tRNAs": "79",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Halorussus marinus",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Halorussus halobius",
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                "accession": "GCA_004765805.1",
                "taxid": 1710537,
                "species_taxid": 1710537,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Halorussus rarus",
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                "species_taxid": 660515,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus litoreus",
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                "species_taxid": 1710536,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus salinus",
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                "accession": "GCA_004765815.2",
                "taxid": 1364935,
                "species_taxid": 1364935,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus ruber",
                "strain": "strain=YC25",
                "accession": "GCA_004765785.1",
                "taxid": 1126238,
                "species_taxid": 1126238,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 727,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus pelagicus",
                "strain": "strain=RC-68",
                "accession": "GCA_004087835.1",
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                "species_taxid": 2505977,
                "relation_to_type": "type",
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                "matched_fragments": 695,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Halostella limicola",
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                "accession": "GCA_003675875.1",
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                "species_taxid": 2448456,
                "relation_to_type": "type",
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                "status": "below_threshold"
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        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_004765795.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_003369835.1",
                "gtdb_species": "s__Halorussus rarus",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haladaptataceae;g__Halorussus",
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            },
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        ]
    },
    "_bac2feature": {
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        "rRNA16S_genes": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "vibrio_cell_shape": null,
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    "_genome_taxon": [
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        "marinus"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}