{
    "type": "genome",
    "identifier": "GCF_004765805.1",
    "organism": "Halorussus halobius",
    "title": "Halorussus halobius",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Jiangsu University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_004765805.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10721430",
        "wgs_master": "SBIU00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1710537",
        "species_taxid": "1710537",
        "organism_name": "Halorussus halobius",
        "infraspecific_name": "strain=HD8-83",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/03/29",
        "asm_name": "ASM476580v1",
        "asm_submitter": "Jiangsu University",
        "gbrs_paired_asm": "GCA_004765805.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/765/805/GCF_004765805.1_ASM476580v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "3933954",
        "genome_size_ungapped": "3933944",
        "gc_percent": "67.500000",
        "replicon_count": "0",
        "scaffold_count": "17",
        "contig_count": "18",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004765805.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "4023",
        "protein_coding_gene_count": "3938",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-03-29",
    "dateModified": "2019-03-29",
    "datePublished": "2019-03-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Halorussus halobius"
        ],
        "sample_taxid": [
            "1710537"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Dalian, Liaoning Province"
        ],
        "sample_host_location_id": [],
        "data_size": "1.062 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 12.5,
        "strain_heterogeneity": 66.67,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3933954",
        "Number of Sequences": "17",
        "Longest Sequences (bp)": "1337886",
        "N50 (bp)": "1042075",
        "Gap Ratio (%)": "0.000254",
        "GCcontent (%)": "67.3",
        "Number of CDSs": "3965",
        "Average Protein Length": "284.3",
        "Coding Ratio (%)": "86.0",
        "Number of rRNAs": "3",
        "Number of tRNAs": "60",
        "Number of CRISPRs": "5"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Halorussus halobius",
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            {
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                "species_taxid": 1710536,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
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            {
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                "ani_threshold": 95,
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            {
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                "accession": "GCA_004765785.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus salinus",
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                "accession": "GCA_004765815.2",
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                "species_taxid": 1364935,
                "relation_to_type": "type",
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                "status": "below_threshold"
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            {
                "organism_name": "Halorussus pelagicus",
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                "species_taxid": 2505977,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halorussus amylolyticus",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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}