{
    "type": "genome",
    "identifier": "GCF_004795745.1",
    "organism": "Vagococcus silagei",
    "title": "Vagococcus silagei",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "FIRDI",
    "publication": [
        {}
    ],
    "properties": {
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        "bioproject": "PRJNA224116",
        "biosample": "SAMN10786376",
        "wgs_master": "SDGV00000000.1",
        "refseq_category": "reference genome",
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        "species_taxid": "2508885",
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        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/04/16",
        "asm_name": "ASM479574v1",
        "asm_submitter": "FIRDI",
        "gbrs_paired_asm": "GCA_004795745.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/795/745/GCF_004795745.1_ASM479574v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2525732",
        "genome_size_ungapped": "2524796",
        "gc_percent": "34.500000",
        "replicon_count": "0",
        "scaffold_count": "51",
        "contig_count": "51",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_004795745.1-RS_2024_03_28",
        "annotation_date": "2024-03-28",
        "total_gene_count": "2516",
        "protein_coding_gene_count": "2418",
        "non_coding_gene_count": "63",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-04-16",
    "dateModified": "2019-04-16",
    "datePublished": "2019-04-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Vagococcus silagei"
        ],
        "sample_taxid": [
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        "sample_host_location_id": [],
        "data_size": "0.711 MB",
        "sample_ph_range": {
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            "max": null
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        "sample_temperature_range": {
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            "max": null
        },
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        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
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        "Number of Sequences": "51",
        "Longest Sequences (bp)": "276041",
        "N50 (bp)": "111189",
        "Gap Ratio (%)": "0.037771",
        "GCcontent (%)": "34.7",
        "Number of CDSs": "2441",
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        "Coding Ratio (%)": "86.8",
        "Number of rRNAs": "2",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "1"
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    "has_analysis": true,
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        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Vagococcus",
        "silagei"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}