{ "tc_result": [ { "organism_name": "Pedobacter cryophilus", "strain": "strain=AR-3-17", "accession": "GCA_005116455.1", "taxid": 2571271, "species_taxid": 2571271, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1323, "total_fragments": 1323, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pedobacter arcticus", "strain": "strain=A12", "accession": "GCA_000302595.1", "taxid": 752140, "species_taxid": 752140, "relation_to_type": "type", "validated": true, "ani": 78.2249, "matched_fragments": 316, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter psychrophilus", "strain": "strain=CCM 8644", "accession": "GCA_001652725.1", "taxid": 1826909, "species_taxid": 1826909, "relation_to_type": "type", "validated": true, "ani": 78.1421, "matched_fragments": 443, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter segetis", "strain": "strain=SD-b", "accession": "GCA_016623585.1", "taxid": 2793069, "species_taxid": 2793069, "relation_to_type": "type", "validated": true, "ani": 77.7345, "matched_fragments": 337, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter aquae", "strain": "strain=CJ43", "accession": "GCA_008195825.1", "taxid": 2605747, "species_taxid": 2605747, "relation_to_type": "type", "validated": true, "ani": 77.6763, "matched_fragments": 381, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter puniceum", "strain": "strain=HX-22-1", "accession": "GCA_009674685.1", "taxid": 2666136, "species_taxid": 2666136, "relation_to_type": "type", "validated": true, "ani": 77.5451, "matched_fragments": 359, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelobium manganitolerans", "strain": "strain=YS-25", "accession": "GCA_003609575.1", "taxid": 1842495, "species_taxid": 1842495, "relation_to_type": "type", "validated": true, "ani": 77.3522, "matched_fragments": 195, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter mongoliensis", "strain": "strain=KCTC 52859", "accession": "GCA_024436395.1", "taxid": 2100740, "species_taxid": 2100740, "relation_to_type": "type", "validated": true, "ani": 76.5719, "matched_fragments": 72, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter fastidiosus", "strain": "strain=CCM 8938", "accession": "GCA_014306625.1", "taxid": 2765361, "species_taxid": 2765361, "relation_to_type": "type", "validated": true, "ani": 76.544, "matched_fragments": 136, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter agri", "strain": "strain=R11", "accession": "GCA_009928685.1", "taxid": 2695265, "species_taxid": 2695265, "relation_to_type": "type", "validated": true, "ani": 76.5233, "matched_fragments": 76, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter ghigonis", "strain": "strain=Marseille-Q2390", "accession": "GCA_903166585.1", "taxid": 2730403, "species_taxid": 2730403, "relation_to_type": "type", "validated": true, "ani": 76.482, "matched_fragments": 97, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudopedobacter saltans", "strain": "strain=DSM 12145", "accession": "GCA_000190735.2", "taxid": 151895, "species_taxid": 151895, "relation_to_type": "type", "validated": true, "ani": 76.4652, "matched_fragments": 148, "total_fragments": 1323, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_005116455.1", "gtdb_species": "s__Pelobium sp005116455", "ani": 100.0, "matched_fragments": 1323, "total_fragments": 1323, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_018828585.1", "gtdb_species": "s__Pelobium sp018828585", "ani": 78.5461, "matched_fragments": 413, "total_fragments": 1323, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.87", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.95", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_014378105.1", "gtdb_species": "s__Pelobium sp014378105", "ani": 78.3197, "matched_fragments": 382, "total_fragments": 1323, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014763615.1", "gtdb_species": "s__Pelobium sp014763615", "ani": 78.3045, "matched_fragments": 407, "total_fragments": 1323, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000302595.1", "gtdb_species": "s__Pelobium arcticum", "ani": 78.1981, "matched_fragments": 317, "total_fragments": 1323, "gtdb_taxonomy": 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"d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013298995.1", "gtdb_species": "s__Pelobium sp013298995", "ani": 76.5447, "matched_fragments": 140, "total_fragments": 1323, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pelobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }