{ "tc_result": [ { "organism_name": "Polyangium aurulentum", "strain": "strain=SDU3-1", "accession": "GCA_005144635.2", "taxid": 2567896, "species_taxid": 2567896, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 4105, "total_fragments": 4106, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Polyangium spumosum", "strain": "strain=DSM 14734", "accession": "GCA_009649845.1", "taxid": 889282, "species_taxid": 889282, "relation_to_type": "type", "validated": true, "ani": 80.8312, "matched_fragments": 2075, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium fumosum", "strain": "strain=DSM 14668", "accession": "GCA_005144585.1", "taxid": 889272, "species_taxid": 889272, "relation_to_type": "neotype", "validated": true, "ani": 80.5228, "matched_fragments": 2132, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chondromyces crocatus", "strain": "strain=Cm c5", "accession": "GCA_001189295.1", "taxid": 52, "species_taxid": 52, "relation_to_type": "type", "validated": true, "ani": 77.0049, "matched_fragments": 961, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Labilithrix luteola", "strain": "strain=DSM 27648", "accession": "GCA_001263205.1", "taxid": 1391654, "species_taxid": 1391654, "relation_to_type": "type", "validated": true, "ani": 76.1343, "matched_fragments": 683, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sandaracinus amylolyticus", "strain": "strain=DSM 53668", "accession": "GCA_000737325.2", "taxid": 927083, "species_taxid": 927083, "relation_to_type": "type", "validated": true, "ani": 75.4577, "matched_fragments": 1226, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nannocystis exedens", "strain": "strain=DSM 71", "accession": "GCA_002343915.1", "taxid": 54, "species_taxid": 54, "relation_to_type": "type", "validated": true, "ani": 75.17, "matched_fragments": 950, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haliangium ochraceum", "strain": "strain=DSM 14365", "accession": "GCA_000024805.1", "taxid": 80816, "species_taxid": 80816, "relation_to_type": "type", "validated": true, "ani": 75.1671, "matched_fragments": 727, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nannocystis exedens", "strain": "strain=ATCC 25963", "accession": "GCA_900112715.1", "taxid": 54, "species_taxid": 54, "relation_to_type": "type", "validated": true, "ani": 75.1151, "matched_fragments": 936, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halorhodospira neutriphila", "strain": "strain=DSM 15116", "accession": "GCA_016584055.1", "taxid": 168379, "species_taxid": 168379, "relation_to_type": "type", "validated": true, "ani": 74.9851, "matched_fragments": 211, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces laixinhei", "strain": "strain=HY052", "accession": "GCA_006337065.1", "taxid": 2585717, "species_taxid": 2585717, "relation_to_type": "type", "validated": true, "ani": 74.9073, "matched_fragments": 234, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinarimonas rosea", "strain": "strain=DSM 21201", "accession": "GCA_000429045.1", "taxid": 552063, "species_taxid": 552063, "relation_to_type": "type", "validated": true, "ani": 74.8897, "matched_fragments": 524, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseivivax isoporae", "strain": "strain=LMG 25204", "accession": "GCA_000521865.1", "taxid": 591206, "species_taxid": 591206, "relation_to_type": "type", "validated": true, "ani": 74.8839, "matched_fragments": 341, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tepidiphilus margaritifer", "strain": "strain=DSM 15129", "accession": "GCA_000425565.1", "taxid": 203471, "species_taxid": 203471, "relation_to_type": "type", "validated": true, "ani": 74.8711, "matched_fragments": 107, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium choerinum", "strain": "strain=DSM 20434", "accession": "GCA_000484675.1", "taxid": 35760, "species_taxid": 35760, "relation_to_type": "type", "validated": true, "ani": 74.8662, "matched_fragments": 131, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces lapidis", "strain": "strain=JCM 14321", "accession": "GCA_009749405.1", "taxid": 279574, "species_taxid": 279574, "relation_to_type": "type", "validated": true, "ani": 74.8602, "matched_fragments": 356, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytohabitans rumicis", "strain": "strain=NBRC 108638", "accession": "GCA_011764445.1", "taxid": 1076125, "species_taxid": 1076125, "relation_to_type": "type", "validated": true, "ani": 74.8047, "matched_fragments": 465, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis regifaucium", "strain": "strain=GY080", "accession": "GCA_001613935.1", "taxid": 546365, "species_taxid": 546365, "relation_to_type": "type", "validated": true, "ani": 74.7908, "matched_fragments": 317, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia ruanii", "strain": "strain=JCM 15130", "accession": "GCA_009193175.1", "taxid": 348442, "species_taxid": 348442, "relation_to_type": "type", "validated": true, "ani": 74.7658, "matched_fragments": 355, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium platyrrhinorum", "strain": "strain=SMA15", "accession": "GCA_010667645.1", "taxid": 2661628, "species_taxid": 2661628, "relation_to_type": "type", "validated": true, "ani": 74.7571, "matched_fragments": 127, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium phasiani", "strain": "strain=6T3", "accession": "GCA_019331775.1", "taxid": 2834431, "species_taxid": 2834431, "relation_to_type": "type", "validated": true, "ani": 74.753, "matched_fragments": 153, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium aesculapii", "strain": "strain=DSM 26737", "accession": "GCA_001417815.1", "taxid": 1329411, "species_taxid": 1329411, "relation_to_type": "type", "validated": true, "ani": 74.6655, "matched_fragments": 110, "total_fragments": 4106, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_005144635.1", "gtdb_species": "s__Polyangium sp005144635", "ani": 99.9923, "matched_fragments": 4060, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Polyangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_009649845.1", "gtdb_species": "s__Polyangium spumosum", "ani": 80.8464, "matched_fragments": 2072, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Polyangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005144585.1", "gtdb_species": "s__Polyangium fumosum", "ani": 80.5287, "matched_fragments": 2129, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Polyangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001312805.1", "gtdb_species": "s__Byssovorax cruenta", "ani": 80.2666, "matched_fragments": 59, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Byssovorax", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004135735.1", "gtdb_species": "s__Sorangium cellulosum_F", "ani": 77.5055, "matched_fragments": 1434, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000418325.1", "gtdb_species": "s__Sorangium cellulosum_D", "ani": 77.5006, "matched_fragments": 1622, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.45", "min_intra_species_ani": "95.45", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903906315.1", "gtdb_species": "s__CAIVJW01 sp903906315", "ani": 77.49, "matched_fragments": 1207, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__CAIVJW01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002950945.1", "gtdb_species": "s__Sorangium cellulosum_E", "ani": 77.4781, "matched_fragments": 1613, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000067165.1", "gtdb_species": "s__Sorangium cellulosum_B", "ani": 77.377, "matched_fragments": 1478, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001931535.1", "gtdb_species": "s__Minicystis rosea", "ani": 77.284, "matched_fragments": 1480, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Minicystis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000601485.1", "gtdb_species": "s__Chondromyces apiculatus", "ani": 77.0272, "matched_fragments": 1127, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Chondromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903893335.1", "gtdb_species": "s__CAITLX01 sp903893335", "ani": 76.6242, "matched_fragments": 691, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__CAITLX01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013361525.1", "gtdb_species": "s__CAITIQ01 sp013361525", "ani": 76.2201, "matched_fragments": 782, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__CAITIQ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016212965.1", "gtdb_species": "s__JACRDA01 sp016212965", "ani": 75.9896, "matched_fragments": 1077, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JACRDA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903916195.1", "gtdb_species": "s__CAIVQB01 sp903916195", "ani": 74.8836, "matched_fragments": 186, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__UBA9464;g__CAIVQB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.38", "min_intra_species_ani": "98.88", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_000425565.1", "gtdb_species": "s__Tepidiphilus margaritifer", "ani": 74.8631, "matched_fragments": 109, "total_fragments": 4106, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Tepidiphilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }