{ "type": "genome", "identifier": "GCF_005250615.1", "organism": "Pseudomonas rhizoryzae", "title": "Pseudomonas rhizoryzae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Agricultural Resources and Regional Planning,CAAS", "publication": [ {} ], "properties": { "assembly_accession": "GCF_005250615.1", "bioproject": "PRJNA224116", "biosample": "SAMN11470674", "wgs_master": "SULM00000000.1", "refseq_category": "reference genome", "taxid": "2571129", "species_taxid": "2571129", "organism_name": "Pseudomonas rhizoryzae", "infraspecific_name": "strain=RY24", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/05/07", "asm_name": "ASM525061v1", "asm_submitter": "Institute of Agricultural Resources and Regional Planning,CAAS", "gbrs_paired_asm": "GCA_005250615.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/005/250/615/GCF_005250615.1_ASM525061v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5346010", "genome_size_ungapped": "5346010", "gc_percent": "65.000000", "replicon_count": "0", "scaffold_count": "45", "contig_count": "45", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_005250615.1-RS_2024_04_03", "annotation_date": "2024-04-03", "total_gene_count": "4952", "protein_coding_gene_count": "4825", "non_coding_gene_count": "74", "pubmed_id": "15388721" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-05-07", "dateModified": "2019-05-07", "datePublished": "2019-05-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas rhizoryzae" ], "sample_taxid": [ "2571129" ], "sample_host_organism": [ "rice" ], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas koreensis", "strain": "strain=KCTC 12208", "accession": "GCA_010093225.1", "taxid": 266061, "species_taxid": 266061, "relation_to_type": "type", "validated": true, "ani": 76.5208, "matched_fragments": 187, "total_fragments": 1756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas broegbernensis", "strain": "strain=DSM 12573", "accession": "GCA_014202435.1", "taxid": 83619, "species_taxid": 83619, "relation_to_type": "type", "validated": true, "ani": 76.4311, "matched_fragments": 220, "total_fragments": 1756, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas broegbernensis", "strain": "strain=DSM 12573", "accession": "GCA_010093165.1", "taxid": 83619, "species_taxid": 83619, "relation_to_type": "type", "validated": true, "ani": 76.4128, "matched_fragments": 218, "total_fragments": 1756, "ani_threshold": 95, "status": 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