# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence01:2485..3018(+)	frameshift		3009	WP_000120355.1	ABC transporter ATP-binding protein	98.9	75.1	63.4
MGA_4	LOCUS_00040	sequence01:3015..3185(+)	frameshift		3009	WP_010774180.1	ATP-binding cassette domain-containing protein	100.0	24.0	46.4
MGA_5	LOCUS_00050	sequence01:3185..3847(+)	frameshift		3736	WP_010964141.1	FtsX-like permease family protein	83.6	16.8	30.7
MGA_6	LOCUS_00060	sequence01:3757..5778(+)	frameshift		3715	WP_003721622.1	ABC transporter permease	83.1	49.7	34.4
MGA_8	LOCUS_00080	sequence01:7096..7818(+)	partial			WP_005817222.1	methionine ABC transporter ATP-binding protein	98.3	71.2	46.7
MGA_14	LOCUS_00140	sequence01:12574..13083(+)	partial			WP_003082887.1	GNAT family N-acetyltransferase	59.2	56.5	37.5
MGA_26	LOCUS_00260	sequence01:22845..23138(+)	partial			WP_011222020.1	metalloregulator ArsR/SmtB family transcription factor	82.5	66.4	58.8
MGA_50	LOCUS_00500	sequence01:44799..45386(-)	partial			WP_002382413.1	lipoprotein	73.8	70.9	64.6
MGA_56	LOCUS_00560	sequence01:50542..51324(-)	partial			WP_002387265.1	SHOCT domain-containing protein	66.5	79.9	34.7
MGA_59	LOCUS_00590	sequence01:52256..52645(-)	partial			WP_011674687.1	S24 family peptidase	73.6	42.7	46.4
MGA_66	LOCUS_00660	sequence01:54656..55465(+)	partial			WP_011860997.1	phage recombination protein Bet	73.6	79.0	41.8
MGA_68	LOCUS_00680	sequence01:56252..57076(+)	partial			WP_011674674.1	DUF4373 domain-containing protein	52.2	55.6	36.7
MGA_81	LOCUS_00810	sequence01:64590..65501(+)	partial			WP_011109439.1	NAD+--arginine ADP-ribosyltransferase EFV	99.0	61.6	59.0
MGA_93	LOCUS_00930	sequence01:73762..75372(+)	partial			WP_011101125.1	phage tail spike protein	70.5	62.0	27.4
MGA_94	LOCUS_00940	sequence01:75372..77237(+)	partial			WP_000536253.1	DUF859 family phage minor structural protein	70.5	64.8	26.9
MGA_100	LOCUS_01000	sequence01:79470..80510(+)	partial			WP_010905391.1	peptidoglycan amidohydrolase family protein	27.2	45.2	35.0
MGA_102	LOCUS_01020	sequence01:81053..81253(+)	partial			WP_010989942.1	anti-CRISPR protein AcrIIA1	98.5	43.6	43.1
MGA_149	LOCUS_01490	sequence01:122128..123066(-)	partial			WP_003592858.1	cell wall hydrolase P75	66.0	43.9	35.6
MGA_171	LOCUS_01710	sequence01:147526..149460(+)	partial			WP_030862198.1	serine hydrolase	35.4	67.9	33.1
MGA_188	LOCUS_01870	sequence01:164937..165110(-)	frameshift		165124	WP_003642231.1	ABC transporter ATP-binding protein	100.0	9.7	59.6
MGA_208	LOCUS_02070	sequence01:184299..187031(+)	partial			WP_002288511.1	translation initiation factor IF-2	67.0	79.4	85.6
MGA_220	LOCUS_02190	sequence01:200386..201513(-)	partial			WP_002289045.1	DUF58 domain-containing protein	63.2	72.8	23.1
MGA_250	LOCUS_02490	sequence02:25106..25984(-)	partial			WP_011987065.1	helix-turn-helix domain-containing protein	85.6	35.9	27.1
MGA_253	LOCUS_02520	sequence02:27694..28557(+)	partial			WP_011068291.1	MarR family winged helix-turn-helix transcriptional regulator	24.7	32.7	45.1
MGA_363	LOCUS_03620	sequence02:120694..120930(-)	partial			WP_002287934.1	IS30 family transposase	93.6	21.9	42.5
MGA_371	LOCUS_03700	sequence03:102..890(-)	partial			WP_003566207.1	hypothetical protein	56.1	50.9	24.8
MGA_373	LOCUS_03720	sequence03:1396..2076(+)	frameshift		2061	WP_011675027.1	NADP-dependent oxidoreductase	99.1	64.9	64.7
MGA_374	LOCUS_03730	sequence03:2073..2405(+)	frameshift		2061	WP_011100874.1	NADP-dependent oxidoreductase	90.9	29.9	56.0
MGA_386	LOCUS_03850	sequence03:16284..17093(+)	partial			WP_011948350.1	AraC family transcriptional regulator	36.1	39.8	36.1
MGA_399	LOCUS_03980	sequence03:35660..37192(+)	partial			WP_003243833.1	two-component system sensor histidine kinase YesM	65.3	58.1	32.4
MGA_400	LOCUS_03990	sequence03:37189..38619(+)	partial			WP_003244566.1	two-component system response regulator YesN	19.5	25.8	45.3
MGA_404	LOCUS_04030	sequence03:43858..45810(-)	partial			WP_011109152.1	glycoside hydrolase family 88 protein	50.2	70.3	30.1
MGA_405	LOCUS_04040	sequence03:45813..49262(-)	partial			WP_000515226.1	LPXTG-anchored adhesin/beta-galactosidase BgaA	66.1	37.0	34.4
MGA_427	LOCUS_04260	sequence03:77744..78424(+)	partial			WP_011475532.1	L,D-transpeptidase	65.0	71.8	58.7
MGA_435	LOCUS_04340	sequence03:85387..87060(+)	partial			WP_003731998.1	sensor histidine kinase	50.4	48.9	25.7
MGA_436	LOCUS_04350	sequence03:87063..88613(+)	partial			WP_010989345.1	AraC family transcriptional regulator	19.0	35.4	43.9
MGA_450	LOCUS_04490	sequence03:109496..109909(+)	partial			WP_000759944.1	DUF4430 domain-containing protein	62.8	66.7	37.2
MGA_455	LOCUS_04540	sequence03:115580..116371(+)	partial			WP_001086430.1	AraC family transcriptional regulator	33.5	28.5	31.8
MGA_456	LOCUS_04550	sequence03:116423..117577(-)	partial			WP_050754237.1	ABC-2 transporter permease	83.9	69.8	44.6
MGA_459	LOCUS_04570	sequence04:1101..2600(-)	partial			WP_002287092.1	glucose PTS transporter subunit IIA	96.6	73.5	56.2
MGA_472	LOCUS_04700	sequence04:19106..20134(-)	partial			WP_011726740.1	plasmid pRiA4b ORF-3 family protein	48.5	71.7	33.9
MGA_485	LOCUS_04830	sequence04:30549..31013(-)	partial			WP_011476321.1	type II toxin-antitoxin system death-on-curing family toxin	51.3	67.5	39.8
MGA_487	LOCUS_04850	sequence04:32462..33007(-)	partial			WP_011107264.1	EFR1 family ferrodoxin	59.7	44.5	34.2
MGA_488	LOCUS_04860	sequence04:33213..33740(-)	frameshift		33233	WP_010876566.1	nitroreductase family protein	95.4	69.5	33.9
MGA_493	LOCUS_04910	sequence04:36831..37520(-)	partial			WP_001111244.1	hypothetical protein	57.2	72.1	43.9
MGA_494	LOCUS_04920	sequence04:37638..37931(+)	frameshift		37880	WP_165992825.1	IS3 family transposase	80.4	20.5	57.7
MGA_495	LOCUS_04930	sequence04:37943..38794(+)	frameshift		37880	WP_165992825.1	IS3 family transposase	99.3	73.5	52.7
MGA_504	LOCUS_05020	sequence04:46352..46471(-)	internal_stop_codon	46487..46489(-),46709..46711(-)		WP_002377988.1	IS200/IS605 family transposase	100.0	29.5	76.9
MGA_505	LOCUS_05030	sequence04:46487..46666(-)	internal_stop_codon	46487..46489(-),46709..46711(-)		WP_002377988.1	IS200/IS605 family transposase	98.3	43.9	75.9
MGA_508	LOCUS_05060	sequence04:48277..48597(-)	partial			WP_002296677.1	alkaline shock response membrane anchor protein AmaP	99.1	56.1	58.1
MGA_513	LOCUS_05110	sequence04:52539..52796(+)	partial			WP_011100920.1	IS1182 family transposase	100.0	15.5	56.5
MGA_554	LOCUS_05510	sequence04:89443..90312(-)	partial			WP_163911759.1	toll/interleukin-1 receptor domain-containing protein	46.4	28.1	40.3
MGA_557	LOCUS_05540	sequence04:91312..93108(-)	partial			WP_010989680.1	LPXTG cell wall anchor domain-containing protein	99.7	68.3	61.6
MGA_558	LOCUS_05550	sequence04:93045..94238(-)	partial			WP_010989680.1	LPXTG cell wall anchor domain-containing protein	87.9	40.6	68.3
MGA_562	LOCUS_05590	sequence04:96987..97529(+)	partial			WP_003732294.1	DUF2975 domain-containing protein	61.7	61.0	30.6
MGA_573	LOCUS_05700	sequence05:10329..11216(+)	partial			WP_010965665.1	hypothetical protein	38.3	82.7	44.2
MGA_575	LOCUS_05720	sequence05:11849..12835(+)	partial			WP_193577597.1	GHKL domain-containing protein	66.8	50.8	35.2
MGA_587	LOCUS_05840	sequence05:21690..22442(-)	partial			WP_011860893.1	ABC transporter ATP-binding protein	92.0	74.0	50.0
MGA_589	LOCUS_05860	sequence05:23352..24149(-)	partial			WP_011100861.1	DUF2785 domain-containing protein	75.5	72.9	33.7
MGA_591	LOCUS_05880	sequence05:24776..25201(+)	frameshift		25186	WP_011102119.1	NmrA family NAD(P)-binding protein	95.7	48.3	43.9
MGA_592	LOCUS_05890	sequence05:25188..25643(+)	frameshift		25186	WP_011102119.1	NmrA family NAD(P)-binding protein	94.0	49.0	36.6
MGA_601	LOCUS_05980	sequence05:29791..30051(+)	partial			WP_002295437.1	hypothetical protein	81.4	72.9	41.4
MGA_605	LOCUS_06020	sequence05:32970..33866(-)	partial			WP_011837327.1	DUF1803 domain-containing protein	67.1	82.5	26.8
MGA_629	LOCUS_06260	sequence05:60891..61427(-)	frameshift		61530,61428	WP_002287251.1	ABC transporter ATP-binding protein	85.4	67.6	40.8
MGA_651	LOCUS_06480	sequence05:81325..82374(-)	partial			WP_002365717.1	SGNH/GDSL hydrolase family protein	70.8	81.9	50.0
MGA_667	LOCUS_06640	sequence05:95907..>96442(-)	partial			WP_011674482.1	IS91 family transposase	69.5	27.8	58.5
MGA_686	LOCUS_06830	sequence06:22215..22643(+)	partial			WP_002288333.1	lipoprotein	69.0	66.4	50.5
MGA_692	LOCUS_06890	sequence06:27457..28065(+)	partial			WP_003548923.1	helix-turn-helix transcriptional regulator	42.1	25.9	40.0
MGA_702	LOCUS_06990	sequence06:37366..37806(-)	partial			WP_025873024.1	DUF4950 domain-containing protein	91.8	34.3	35.7
MGA_703	LOCUS_07000	sequence06:37948..38316(-)	internal_stop_codon	38329..38331(-)		WP_001202596.1	NUDIX pyrophosphatase	94.3	77.2	42.6
MGA_705	LOCUS_07020	sequence06:39779..39937(+)	partial			WP_002323011.1	hypothetical protein	86.5	59.2	66.7
MGA_747	LOCUS_07440	sequence07:5568..6776(+)	partial			WP_011068727.1	family 43 glycosylhydrolase	77.9	36.7	26.2
MGA_752	LOCUS_07490	sequence07:10684..17043(+)	partial			WP_011837563.1	Cna B-type domain-containing protein	32.6	41.6	31.1
MGA_763	LOCUS_07600	sequence07:27597..28691(+)	partial			WP_010868749.1	DUF58 domain-containing protein	52.5	45.9	24.1
MGA_780	LOCUS_07770	sequence07:46561..49620(+)	partial			WP_010886437.1	rhamnogalacturonan exolyase	40.1	62.1	42.3
MGA_790	LOCUS_07870	sequence07:61327..63057(+)	partial			WP_010918697.1	rhamnogalacturonan acetylesterase	27.3	53.3	35.5
MGA_813	LOCUS_08100	sequence08:13881..16886(+)	partial			WP_011101976.1	choice-of-anchor A family protein	38.2	38.9	25.1
MGA_828	LOCUS_08250	sequence08:30100..31350(+)	partial			WP_011674729.1	sortase	41.8	54.2	30.7
MGA_844	LOCUS_08410	sequence08:42519..42893(-)	partial			WP_003701679.1	metal-dependent transcriptional regulator	94.4	54.4	48.7
MGA_891	LOCUS_08880	sequence09:23428..23601(+)	partial			WP_000796544.1	PTS ascorbate transporter subunit IIC	77.2	66.7	77.3
MGA_894	LOCUS_08910	sequence09:25442..25660(+)	partial			WP_002263145.1	class I SAM-dependent methyltransferase	95.8	27.5	59.4
MGA_895	LOCUS_08920	sequence09:25680..25913(+)	frameshift		25904	WP_002352309.1	cupin domain-containing protein	100.0	67.0	72.7
MGA_942	LOCUS_09390	sequence10:1425..2303(-)	partial			WP_011860905.1	glycosylating toxin anti-sigma factor TcdC	39.4	49.6	50.4
MGA_943	LOCUS_09400	sequence10:2365..3003(-)	partial			WP_011110319.1	XRE family transcriptional regulator	58.5	58.0	38.8
MGA_953	LOCUS_09500	sequence10:8225..9706(+)	partial			WP_003546830.1	ATP-dependent RecD-like DNA helicase	87.6	66.7	25.2
MGA_963	LOCUS_09600	sequence10:13464..13772(+)	partial			WP_000579612.1	helix-turn-helix transcriptional regulator	65.7	42.4	40.3
MGA_981	LOCUS_09780	sequence10:23713..26226(+)	partial			WP_002286502.1	phage tail tape measure protein	84.0	64.7	35.5
MGA_987	LOCUS_09840	sequence10:31053..31994(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	49.2	11.1	51.9
MGA_997	LOCUS_09940	sequence10:42318..43367(-)	partial			WP_011101137.1	DNA/RNA non-specific endonuclease	56.2	59.4	56.6
MGA_1020	LOCUS_10170	sequence11:1909..2370(+)	frameshift		2346	WP_011476192.1	MFS transporter	98.7	38.4	60.9
MGA_1021	LOCUS_10180	sequence11:2354..3103(+)	frameshift		2346	WP_011674406.1	MFS transporter	99.6	62.7	47.6
MGA_1095	LOCUS_10910	sequence12:16918..18528(+)	partial			WP_000222616.1	response regulator transcription factor	31.5	67.8	37.3
MGA_1109	LOCUS_11050	sequence12:32769..33671(+)	partial			WP_013225201.1	family 43 glycosylhydrolase	99.0	30.1	36.7
MGA_1118	LOCUS_11140	sequence12:41743..43056(+)	partial			WP_225355414.1	C40 family peptidase	30.4	26.2	61.8
MGA_1120	LOCUS_11160	sequence12:44782..46047(+)	partial			WP_002287386.1	NlpC/P60 family protein	73.6	59.5	33.2
MGA_1143	LOCUS_11390	sequence13:20392..20556(-)	partial			WP_002358151.1	hypothetical protein	87.0	70.1	48.9
MGA_1154	LOCUS_11500	sequence13:29616..30461(-)	partial			WP_001986511.1	M15 family metallopeptidase	71.9	84.1	41.5
MGA_1166	LOCUS_11620	sequence13:40810..42171(-)	partial			WP_002295400.1	LCP family protein	70.6	76.2	54.1
MGA_1179	LOCUS_11750	sequence13:53245..53415(-)	frameshift		53441	WP_009994775.1	type II toxin-antitoxin system Phd/YefM family antitoxin	96.4	63.5	50.0
MGA_1226	LOCUS_12210	sequence14:48506..49324(+)	frameshift		49291	WP_002285820.1	ISL3 family transposase	98.9	67.1	71.7
MGA_1227	LOCUS_12220	sequence14:49293..49790(+)	frameshift		49291	WP_002285820.1	ISL3 family transposase	80.6	33.2	67.7
MGA_1255	LOCUS_12500	sequence15:29759..30580(+)	partial			WP_003724042.1	ABC transporter permease	83.5	60.6	34.8
MGA_1271	LOCUS_12660	sequence16:283..2631(-)	partial			WP_001035315.1	pneumococcal surface protein A	27.9	33.3	41.4
MGA_1380	LOCUS_13750	sequence18:30367..32724(+)	partial			WP_055229046.1	glycoside hydrolase family 127 protein	74.6	84.7	32.3
MGA_1382	LOCUS_13770	sequence18:34094..34690(+)	partial			WP_002382901.1	polysaccharide deacetylase family protein	92.4	35.3	41.5
MGA_1384	LOCUS_13790	sequence18:36821..38395(+)	internal_stop_codon	38393..38395(+)		WP_000780623.1	glycoside hydrolase family 95 protein	99.8	68.3	35.2
MGA_1385	LOCUS_13800	sequence18:38426..38959(+)	internal_stop_codon	38393..38395(+)		WP_005791960.1	glycoside hydrolase family 95 protein	89.3	18.8	44.7
MGA_1391	LOCUS_13860	sequence19:3882..4184(+)	partial			WP_011101609.1	diacylglycerol kinase family protein	92.0	66.7	39.1
MGA_1406	LOCUS_14010	sequence19:19473..20399(+)	partial			WP_002286745.1	dihydrolipoamide dehydrogenase	55.5	59.5	38.7
MGA_1410	LOCUS_14050	sequence19:23403..24065(-)	partial			WP_011837300.1	helix-turn-helix transcriptional regulator	50.5	61.4	36.4
MGA_1433	LOCUS_14280	sequence20:6317..8875(+)	partial			WP_025189858.1	glycoside hydrolase family 31 protein	92.3	39.6	45.1
MGA_1530	LOCUS_15250	sequence22:29583..30689(+)	partial			WP_011860827.1	BlaR1 family beta-lactam sensor/signal transducer	68.8	44.6	24.1
MGA_1553	LOCUS_15480	sequence23:17401..17727(-)	partial			WP_002318601.1	DNA/RNA nuclease SfsA	93.5	45.9	52.5
MGA_1555	LOCUS_15500	sequence23:19059..19475(-)	partial			WP_002318601.1	DNA/RNA nuclease SfsA	78.3	49.5	58.7
MGA_1574	LOCUS_15690	sequence24:8888..9577(-)	partial			WP_011227821.1	A24 family peptidase	57.6	37.5	36.6
MGA_1594	LOCUS_15890	sequence24:29681..30340(-)	frameshift		29791	WP_051532688.1	DUF3578 domain-containing protein	47.9	29.6	35.5
MGA_1612	LOCUS_16070	sequence25:13301..13984(+)	partial			WP_003733142.1	resuscitation-promoting factor	42.3	22.3	57.1
MGA_1652	LOCUS_16470	sequence26:17621..17797(+)	internal_stop_codon	17795..17797(+)		WP_001262593.1	virulence RhuM family protein	98.3	18.0	70.0
MGA_1653	LOCUS_16480	sequence26:17798..17956(+)	internal_stop_codon	17795..17797(+)		WP_001262593.1	virulence RhuM family protein	86.5	13.8	66.7
MGA_1676	LOCUS_16710	sequence27:14766..15494(+)	partial			WP_236615678.1	alpha/beta hydrolase	84.3	70.1	33.6
MGA_1739	LOCUS_17340	sequence29:19420..21264(-)	partial			WP_012256471.1	carbohydrate-binding domain-containing protein	74.6	79.0	39.0
MGA_1753	LOCUS_17480	sequence30:8954..9424(-)	partial			WP_003566777.1	MarR family transcriptional regulator	64.1	69.8	26.9
MGA_1764	LOCUS_17590	sequence30:22032..22628(-)	internal_stop_codon	22695..22697(-)		WP_010964806.1	nucleotidyltransferase domain-containing protein	99.0	75.7	42.3
MGA_1765	LOCUS_17600	sequence30:23186..23806(-)	partial			WP_011674809.1	IS30 family transposase	95.1	59.0	54.3
MGA_1772	LOCUS_17670	sequence31:7370..8365(-)	partial			WP_002369233.1	polysaccharide deacetylase family protein	74.6	79.4	47.0
MGA_1875	LOCUS_18700	sequence37:10824..11000(+)	partial			WP_002356740.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1880	LOCUS_18750	sequence38:4068..4724(-)	partial			WP_000350628.1	GNAT family N-acetyltransferase	67.0	71.6	28.8
MGA_1885	LOCUS_18800	sequence38:10102..10416(+)	internal_stop_codon	10414..10416(+)		WP_002262716.1	alpha/beta hydrolase	91.3	34.5	38.5
MGA_1930	LOCUS_19250	sequence44:1649..2416(+)	frameshift,internal_stop_codon	2394..2396(+)	2386,1935	WP_002346915.1	IS110 family transposase	60.4	36.5	68.8
MGA_1931	LOCUS_19260	sequence44:2403..2819(+)	frameshift,internal_stop_codon	2394..2396(+)	2386	WP_002346915.1	IS110 family transposase	100.0	33.2	71.0
MGA_1934	LOCUS_19290	sequence44:4828..5448(+)	frameshift		5442	WP_011102097.1	phytoene desaturase family protein	99.5	41.2	59.5
MGA_1935	LOCUS_19300	sequence44:5448..6023(+)	frameshift		5442	WP_011102097.1	phytoene desaturase family protein	95.8	36.7	60.1
MGA_1941	LOCUS_19340	sequence48:149..3175(+)	partial			WP_000516926.1	VaFE repeat-containing surface-anchored protein	48.2	42.5	41.6
MGA_1948	LOCUS_19410	sequence51:75..878(-)	frameshift		931	WP_141741171.1	IS3 family transposase	100.0	56.4	80.5
MGA_1950	LOCUS_19420	sequence52:78..914(-)	frameshift		958	WP_137613987.1	IS3 family transposase	99.6	71.6	68.6
MGA_1951	LOCUS_19430	sequence52:950..1240(-)	frameshift		964	WP_099434174.1	IS3-like element ISEfa8 family transposase	97.9	24.3	80.9
