{ "type": "genome", "identifier": "GCF_005405885.1", "organism": "Gandjariella thermophila", "title": "Gandjariella thermophila", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Universitas Indonesia", "publication": [ {} ], "properties": { "assembly_accession": "GCF_005405885.1", "bioproject": "PRJNA224116", "biosample": "SAMD00165254", "wgs_master": "BJFL00000000.1", "refseq_category": "reference genome", "taxid": "1931992", "species_taxid": "1931992", "organism_name": "Gandjariella thermophila", "infraspecific_name": "strain=SL3-2-4", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/04/17", "asm_name": "ASM540588v1", "asm_submitter": "Universitas Indonesia", "gbrs_paired_asm": "GCA_005405885.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/005/405/885/GCF_005405885.1_ASM540588v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6115205", "genome_size_ungapped": "6114401", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "131", "contig_count": "131", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_005405885.1-RS_2024_08_26", "annotation_date": "2024-08-26", "total_gene_count": "5805", "protein_coding_gene_count": "5621", "non_coding_gene_count": "57", "pubmed_id": "31329534" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-04-17", "dateModified": "2019-04-17", "datePublished": "2019-04-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Gandjariella thermophila" ], "sample_taxid": [ "1931992" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ 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43355, "species_taxid": 43355, "relation_to_type": "type", "validated": true, "ani": 78.9392, "matched_fragments": 939, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinokineospora enzanensis", "strain": "strain=DSM 44649", "accession": "GCA_000374445.1", "taxid": 155975, "species_taxid": 155975, "relation_to_type": "type", "validated": true, "ani": 78.8845, "matched_fragments": 760, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis granulosa", "strain": "strain=DSM 45669", "accession": "GCA_011758745.1", "taxid": 185684, "species_taxid": 185684, "relation_to_type": "type", "validated": true, "ani": 78.8814, "matched_fragments": 738, "total_fragments": 1973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharopolyspora shandongensis", "strain": "strain=CGMCC 4.3530", "accession": "GCA_900106995.1", "taxid": 418495, "species_taxid": 418495, 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