{ "type": "genome", "identifier": "GCF_005670605.1", "organism": "Mycolicibacterium neoaurum", "title": "Mycolicibacterium neoaurum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_005670605.1", "bioproject": "PRJNA224116", "biosample": "SAMN08339099", "wgs_master": "POTO00000000.1", "refseq_category": "na", "taxid": "1795", "species_taxid": "1795", "organism_name": "Mycolicibacterium neoaurum", "infraspecific_name": "strain=DSM 44074", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/05/23", "asm_name": "ASM567060v1", "asm_submitter": "Uppsala University", "gbrs_paired_asm": "GCA_005670605.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/005/670/605/GCF_005670605.1_ASM567060v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5477923", "genome_size_ungapped": "5476780", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "27", "contig_count": "27", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_005670605.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "5262", "protein_coding_gene_count": "5147", "non_coding_gene_count": "52", "pubmed_id": "31215393;31848383" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-05-23", "dateModified": "2019-05-23", "datePublished": "2019-05-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Mycolicibacterium neoaurum" ], "sample_taxid": [ "1795" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ 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"organism_name": "Mycolicibacterium cosmeticum", "strain": "strain=DSM 44829", "accession": "GCA_005670675.1", "taxid": 258533, "species_taxid": 258533, "relation_to_type": "type", "validated": true, "ani": 81.4578, "matched_fragments": 1083, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium canariasense", "strain": "strain=JCM15298", "accession": "GCA_001570445.1", "taxid": 228230, "species_taxid": 228230, "relation_to_type": "type", "validated": true, "ani": 81.1447, "matched_fragments": 1015, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fluoranthenivorans", "strain": "strain=DSM 44556", "accession": "GCA_011758805.1", "taxid": 258505, "species_taxid": 258505, "relation_to_type": "type", "validated": true, "ani": 80.7979, "matched_fragments": 1027, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium nivoides", "strain": "strain=DL90", "accession": "GCA_003855255.1", "taxid": 2487344, "species_taxid": 2487344, "relation_to_type": "type", "validated": true, "ani": 79.9151, "matched_fragments": 917, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium fortuitum subsp. fortuitum", "strain": "strain=JCM 6387", "accession": "GCA_022179545.1", "taxid": 144549, "species_taxid": 1766, "relation_to_type": "type", "validated": true, "ani": 79.8626, "matched_fragments": 837, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium peregrinum", "strain": "strain=DSM 43271", "accession": "GCA_002102345.1", "taxid": 43304, "species_taxid": 43304, "relation_to_type": "type", "validated": true, "ani": 79.848, "matched_fragments": 889, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium anyangense", 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