# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_17	LOCUS_00160	sequence1:14951..15739(-)	partial			WP_004398550.1	heptaprenyl diphosphate synthase component 1	70.2	72.1	33.9
MGA_36	LOCUS_00350	sequence1:32695..32928(-)	frameshift		32757	WP_010886557.1	NAD-specific glutamate dehydrogenase	72.7	12.6	58.9
MGA_71	LOCUS_00700	sequence1:65167..65517(-)	frameshift		65519	WP_001078448.1	purine-nucleoside phosphorylase	95.7	40.7	67.6
MGA_72	LOCUS_00710	sequence1:65496..65987(-)	frameshift		65519	WP_001078448.1	purine-nucleoside phosphorylase	95.7	57.1	64.1
MGA_104	LOCUS_01030	sequence1:97238..98239(-)	frameshift		98274	WP_001051289.1	dihydrolipoyl dehydrogenase	99.7	70.2	68.4
MGA_105	LOCUS_01040	sequence1:98236..98658(-)	frameshift		98277	WP_001051291.1	dihydrolipoyl dehydrogenase	96.4	28.5	65.9
MGA_127	LOCUS_01260	sequence1:119901..120359(-)	partial			WP_003230248.1	stage III sporulation protein AG	98.7	65.5	49.3
MGA_141	LOCUS_01400	sequence1:129856..131028(-)	frameshift		131036	WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	77.7	39.5	38.0
MGA_143	LOCUS_01420	sequence1:131910..132725(-)	partial			WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	54.6	19.2	37.2
MGA_152	LOCUS_01510	sequence1:141442..141894(+)	partial			WP_004399124.1	competence protein ComGA	98.0	41.3	42.2
MGA_159	LOCUS_01580	sequence1:147110..148279(-)	frameshift		148320	WP_010867156.1	sodium/proline symporter	81.2	63.6	27.2
MGA_160	LOCUS_01590	sequence1:148276..148728(-)	partial			WP_011027655.1	cation acetate symporter	100.0	24.4	31.8
MGA_169	LOCUS_01680	sequence1:159239..159502(-)	partial			WP_000734158.1	DNA (cytosine-5-)-methyltransferase	86.2	21.7	60.0
MGA_173	LOCUS_01720	sequence1:163409..163729(-)	frameshift		163788	WP_011109539.1	group II intron reverse transcriptase/maturase	100.0	16.9	35.8
MGA_174	LOCUS_01730	sequence1:163729..164508(-)	frameshift		163793,164555	WP_002335621.1	group II intron reverse transcriptase/maturase	91.9	39.2	39.3
MGA_175	LOCUS_01740	sequence1:164508..165200(-)	frameshift		164570	WP_002286940.1	group II intron reverse transcriptase/maturase	90.4	33.3	52.8
MGA_182	LOCUS_01810	sequence1:169935..171065(-)	partial			WP_048064848.1	AAA family ATPase	96.0	73.0	33.3
MGA_190	LOCUS_01890	sequence1:175000..175986(-)	partial			WP_004399048.1	endonuclease YokF	67.7	66.2	36.0
MGA_196	LOCUS_01950	sequence1:181248..181544(+)	frameshift		181523	WP_121450865.1	IS3 family transposase	91.8	24.1	53.3
MGA_197	LOCUS_01960	sequence1:181555..182349(+)	frameshift		181523	WP_106004846.1	IS3 family transposase	98.9	71.1	62.8
MGA_211	LOCUS_02100	sequence1:191060..192757(-)	partial			WP_005813606.1	beta-N-acetylhexosaminidase	61.6	81.7	50.3
MGA_215	LOCUS_02140	sequence1:194496..195341(-)	partial			WP_007326414.1	S1 RNA-binding domain-containing protein	71.9	37.1	26.4
MGA_221	LOCUS_02200	sequence1:200494..201579(-)	partial			WP_005811628.1	M23 family metallopeptidase	33.8	22.8	46.7
MGA_232	LOCUS_02310	sequence1:211770..212195(-)	partial			WP_001829793.1	metal-dependent hydrolase	80.9	68.6	31.0
MGA_236	LOCUS_02350	sequence1:213689..215215(-)	internal_stop_codon	215417..215419(-)		WP_010938194.1	ATP-dependent RecD-like DNA helicase	92.7	62.4	40.7
MGA_237	LOCUS_02360	sequence1:215417..215911(-)	internal_stop_codon	215417..215419(-)		WP_011674456.1	ATP-dependent RecD-like DNA helicase	97.6	20.3	26.6
MGA_259	LOCUS_02580	sequence1:236312..236956(-)	internal_stop_codon	237104..237106(-)		WP_013095703.1	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	96.3	27.6	25.0
MGA_264	LOCUS_02630	sequence1:241230..241856(-)	partial			WP_226990882.1	TetR/AcrR family transcriptional regulator	67.3	63.1	30.8
MGA_281	LOCUS_02800	sequence1:259114..259344(-)	frameshift,internal_stop_codon	259057..259059(-)	259119	WP_002286940.1	group II intron reverse transcriptase/maturase	92.1	11.0	52.9
MGA_282	LOCUS_02810	sequence1:259733..260047(+)	partial			WP_005766212.1	Cof-type HAD-IIB family hydrolase	77.9	29.8	42.0
MGA_299	LOCUS_02980	sequence1:277738..277902(-)	frameshift		277897,277891	WP_003107137.1	aldehyde dehydrogenase family protein	85.2	9.4	67.4
MGA_302	LOCUS_03010	sequence1:280061..280306(-)	internal_stop_codon	280346..280348(-)		WP_000359781.1	organic hydroperoxide resistance protein	95.1	55.8	55.8
MGA_303	LOCUS_03020	sequence1:280346..280489(-)	internal_stop_codon	280346..280348(-)		WP_000359781.1	organic hydroperoxide resistance protein	100.0	34.1	66.0
MGA_309	LOCUS_03080	sequence1:286527..287276(+)	partial			WP_000622962.1	methionine ABC transporter ATP-binding protein	87.6	65.5	50.9
MGA_318	LOCUS_03170	sequence1:294812..296104(-)	frameshift		294829	WP_015261158.1	IS21 family transposase	99.8	82.7	40.9
MGA_320	LOCUS_03190	sequence1:297933..298778(-)	partial			WP_010965152.1	bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1	89.7	40.2	23.2
MGA_324	LOCUS_03230	sequence1:302377..302832(-)	partial			WP_003895789.1	excalibur calcium-binding domain-containing protein	34.4	82.5	55.8
MGA_337	LOCUS_03360	sequence1:315339..316391(-)	partial			WP_011460071.1	ParM/StbA family protein	54.0	54.7	25.2
MGA_349	LOCUS_03480	sequence1:324574..324963(+)	partial			WP_001013170.1	competence type IV pilus ATPase ComGA	94.6	38.9	37.0
MGA_382	LOCUS_03810	sequence1:351886..352656(-)	frameshift		352664	WP_000036241.1	Nif3-like dinuclear metal center hexameric protein	100.0	69.2	51.2
MGA_383	LOCUS_03820	sequence1:352662..352994(-)	frameshift		352667	WP_004399125.1	Nif3-like dinuclear metal center hexameric protein	99.1	29.2	53.2
MGA_390	LOCUS_03890	sequence1:359375..360307(-)	frameshift		360309	WP_003230059.1	glycine--tRNA ligase subunit beta	97.4	42.6	40.7
MGA_391	LOCUS_03900	sequence1:360211..361461(-)	frameshift		360309	WP_003230059.1	glycine--tRNA ligase subunit beta	88.7	54.3	54.5
MGA_399	LOCUS_03980	sequence1:366692..367456(-)	frameshift		367494	WP_003230033.1	sporulation protein YqfD	98.8	60.6	37.5
MGA_406	LOCUS_04050	sequence1:371937..372110(-)	partial			WP_003638914.1	30S ribosomal protein S21	70.2	64.5	90.0
MGA_437	LOCUS_04360	sequence1:402727..403038(+)	partial			WP_003722409.1	Na(+)/H(+) antiporter subunit F1	72.8	78.9	54.7
MGA_460	LOCUS_04590	sequence1:425387..425875(+)	frameshift		425872	WP_000868358.1	RsfA family transcriptional regulator	97.5	67.4	52.5
MGA_461	LOCUS_04600	sequence1:425884..426087(+)	frameshift		425872	WP_000868358.1	RsfA family transcriptional regulator	89.6	25.7	50.0
MGA_462	LOCUS_04610	sequence1:426495..426764(-)	frameshift		426799	WP_003229758.1	aspartate--tRNA ligase	98.9	14.9	75.0
MGA_467	LOCUS_04660	sequence1:430203..431087(+)	partial			WP_003723525.1	N-acetylmuramoyl-L-alanine amidase	91.5	60.0	37.6
MGA_479	LOCUS_04780	sequence1:444148..445035(-)	frameshift		445046	WP_000125365.1	tRNA guanosine(34) transglycosylase Tgt	100.0	77.8	84.7
MGA_480	LOCUS_04790	sequence1:445032..445286(-)	frameshift		445046	WP_000125365.1	tRNA guanosine(34) transglycosylase Tgt	95.2	21.1	85.0
MGA_488	LOCUS_04870	sequence1:450865..451938(-)	partial			WP_000690798.1	spore coat assembly protein ExsA	49.3	29.4	30.2
MGA_497	LOCUS_04960	sequence1:458084..458590(-)	frameshift		458628	WP_004398624.1	septum site-determining protein MinD	96.4	61.2	65.2
MGA_498	LOCUS_04970	sequence1:458578..458883(-)	frameshift		458622	WP_000503310.1	septum site-determining protein MinD	86.1	32.8	75.9
MGA_507	LOCUS_05060	sequence1:466593..467459(+)	partial			WP_011229004.1	lysine biosynthesis protein LysX	70.5	73.6	25.3
MGA_527	LOCUS_05260	sequence1:490406..491260(-)	frameshift		491385	WP_003229578.1	spore germination protein GerM	98.6	74.9	41.1
MGA_535	LOCUS_05340	sequence1:497144..497584(+)	partial			WP_003733801.1	YslB family protein	79.5	70.7	31.0
MGA_551	LOCUS_05500	sequence1:516057..516659(+)	partial			WP_010886480.1	transglycosylase SLT domain-containing protein	68.0	75.1	54.4
MGA_574	LOCUS_05730	sequence1:539081..540469(-)	partial			WP_001032106.1	sensory box histidine kinase PhoR	90.7	71.4	47.0
MGA_588	LOCUS_05870	sequence1:554523..556910(-)	frameshift		556903	WP_003229412.1	DNA polymerase III subunit alpha	99.1	70.6	48.7
MGA_589	LOCUS_05880	sequence1:556871..557890(-)	frameshift		556903	WP_000673716.1	DNA polymerase III subunit alpha	97.6	29.8	39.2
MGA_612	LOCUS_06110	sequence1:574912..575310(-)	partial			WP_011181652.1	DUF2953 domain-containing protein	77.3	49.5	24.8
MGA_622	LOCUS_06210	sequence1:585345..588281(+)	partial			WP_011674291.1	transglycosylase domain-containing protein	73.4	77.2	37.5
MGA_630	LOCUS_06290	sequence1:595431..595712(-)	partial			WP_002381831.1	YtxH domain-containing protein	79.6	37.9	39.2
MGA_686	LOCUS_06830	sequence1:655309..655521(+)	partial			WP_003722395.1	S1 domain-containing post-transcriptional regulator GSP13	100.0	57.3	57.1
MGA_700	LOCUS_06970	sequence1:665767..666198(-)	partial			WP_003243745.1	diaminopimelate epimerase	84.6	49.3	38.7
MGA_702	LOCUS_06990	sequence1:666649..666873(+)	partial			WP_010886606.1	NifU family protein	100.0	65.8	68.9
MGA_724	LOCUS_07210	sequence1:687006..687908(-)	frameshift		687937	WP_000041296.1	argininosuccinate lyase	96.3	62.6	61.6
MGA_727	LOCUS_07240	sequence1:690865..691794(-)	partial			WP_164922304.1	fumarylacetoacetate hydrolase family protein	68.6	71.8	50.5
MGA_743	LOCUS_07400	sequence1:706499..707068(+)	partial			WP_000248045.1	YitT family protein	91.0	62.2	29.3
MGA_783	LOCUS_07800	sequence1:752821..753420(-)	frameshift		753455	WP_003233386.1	glycerol uptake facilitator protein GlpF	93.0	67.5	62.7
MGA_784	LOCUS_07810	sequence1:753429..753686(-)	frameshift		753455	WP_004081684.1	MIP/aquaporin family protein	90.6	32.9	53.2
MGA_821	LOCUS_08180	sequence1:789927..790295(-)	partial			WP_011181921.1	comF operon protein ComFC	97.5	53.0	45.2
MGA_846	LOCUS_08430	sequence1:818466..818774(-)	partial			WP_011861771.1	type I-B CRISPR-associated protein Cas8b1/Cst1	96.1	18.1	38.1
MGA_847	LOCUS_08440	sequence1:818825..820159(-)	frameshift		818917	WP_011861771.1	type I-B CRISPR-associated protein Cas8b1/Cst1	93.5	73.3	23.7
MGA_864	LOCUS_08610	sequence1:836898..837629(-)	partial			WP_010968843.1	EAL domain-containing protein	88.1	48.2	26.5
MGA_869	LOCUS_08660	sequence1:843121..843438(-)	partial			WP_010880755.1	Uma2 family endonuclease	53.3	31.1	50.0
MGA_880	LOCUS_08770	sequence1:856215..856832(+)	partial			WP_011970282.1	tyrosine-type recombinase/integrase	93.2	56.4	44.0
MGA_885	LOCUS_08820	sequence1:860467..860982(-)	internal_stop_codon	860986..860988(-)		WP_015943229.1	IS4-like element ISDha2 family transposase	93.0	37.9	46.3
MGA_886	LOCUS_08830	sequence1:860986..861717(-)	internal_stop_codon	860986..860988(-)		WP_015943229.1	IS4-like element ISDha2 family transposase	98.4	57.7	40.5
MGA_896	LOCUS_08930	sequence1:878180..878680(-)	internal_stop_codon	878702..878704(-)		WP_011181932.1	DUF4084 domain-containing protein	97.0	18.0	44.1
MGA_897	LOCUS_08940	sequence1:878702..879448(-)	internal_stop_codon	878702..878704(-)		WP_173513927.1	EAL domain-containing protein	82.3	25.1	27.2
MGA_901	LOCUS_08980	sequence1:884372..884527(+)	frameshift		884494	WP_010929721.1	large conductance mechanosensitive channel protein MscL	94.1	31.6	52.1
MGA_902	LOCUS_08990	sequence1:884900..886507(-)	partial			WP_011021922.1	plasmid pRiA4b ORF-3 family protein	26.9	73.2	34.7
MGA_908	LOCUS_09050	sequence1:892222..892383(-)	frameshift		892430	WP_003230432.1	malate-H+/Na+-lactate antiporter MleN	77.4	8.8	56.1
MGA_929	LOCUS_09260	sequence1:916090..917178(-)	frameshift		917249	WP_011393464.1	hydantoinase B/oxoprolinase family protein	99.7	62.1	53.0
MGA_930	LOCUS_09270	sequence1:917241..917822(-)	frameshift		917252	WP_011393464.1	hydantoinase B/oxoprolinase family protein	94.8	31.1	65.0
MGA_933	LOCUS_09300	sequence1:920798..921823(+)	partial			WP_004188032.1	site-specific DNA-methyltransferase	66.0	83.7	39.7
MGA_944	LOCUS_09410	sequence1:933090..934034(-)	partial			WP_002356521.1	ABC transporter permease/substrate binding protein	83.1	44.3	41.0
MGA_955	LOCUS_09520	sequence1:946047..946637(+)	partial			WP_010979658.1	PD-(D/E)XK nuclease family protein	48.5	35.0	37.9
MGA_958	LOCUS_09550	sequence1:949281..949997(-)	frameshift		950008	WP_000411084.1	D-amino-acid transaminase	97.5	82.3	48.7
MGA_959	LOCUS_09560	sequence1:949997..950125(-)	frameshift		950002	WP_009931211.1	D-amino-acid transaminase	85.7	12.8	62.2
MGA_962	LOCUS_09590	sequence1:951565..951747(-)	partial			WP_012257433.1	M20 family metallopeptidase	85.0	12.9	60.8
MGA_993	LOCUS_09900	sequence1:982025..982765(-)	frameshift		982770	WP_001074641.1	ribose ABC transporter permease	100.0	79.1	64.2
MGA_994	LOCUS_09910	sequence1:982726..982959(-)	frameshift		982770	WP_003573417.1	ribose ABC transporter permease	72.7	17.2	60.7
MGA_1001	LOCUS_09980	sequence1:988919..989590(-)	partial			WP_005808204.1	ABC transporter ATP-binding protein	81.6	60.4	33.3
MGA_1031	LOCUS_10280	sequence1:1023014..1024414(+)	partial			WP_011285697.1	sucrose-specific PTS transporter subunit IIBC	97.9	72.7	61.1
MGA_1051	LOCUS_10480	sequence1:1047506..1048258(-)	frameshift		1048287	WP_011986588.1	cytosine deaminase	99.2	58.9	57.3
MGA_1052	LOCUS_10490	sequence1:1048195..1048752(-)	frameshift		1048287	WP_174847941.1	cytosine deaminase	82.7	34.8	52.3
MGA_1063	LOCUS_10600	sequence1:1063336..1064505(-)	frameshift		1064699	WP_013368420.1	class I SAM-dependent DNA methyltransferase	99.7	56.7	41.7
MGA_1064	LOCUS_10610	sequence1:1064553..1065341(-)	frameshift		1064702	WP_013368420.1	class I SAM-dependent DNA methyltransferase	81.7	32.8	47.9
MGA_1065	LOCUS_10620	sequence1:1065842..1065982(-)	frameshift		1065999	WP_003568165.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	84.8	25.8	63.4
MGA_1066	LOCUS_10630	sequence1:1066274..1066573(+)	frameshift,internal_stop_codon	1066233..1066235(+)	1066223	WP_011141249.1	DUF4188 domain-containing protein	94.9	60.8	45.8
MGA_1069	LOCUS_10660	sequence1:1068715..1068849(-)	frameshift,internal_stop_codon	1068861..1068863(-)	1068930,1068875,1068716,1068677	WP_003243164.1	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	97.7	27.0	67.4
MGA_1102	LOCUS_10990	sequence1:1095190..1095381(-)	partial			WP_013529878.1	response regulator transcription factor	81.0	23.7	47.1
MGA_1113	LOCUS_11100	sequence1:1106015..1107106(+)	frameshift		1107082	WP_003229333.1	amidohydrolase	98.1	66.5	37.1
MGA_1114	LOCUS_11110	sequence1:1107103..1107600(+)	frameshift		1107082	WP_003229333.1	amidohydrolase	99.4	31.0	47.3
MGA_1121	LOCUS_11180	sequence1:1113751..1114515(-)	frameshift		1113807	WP_005814609.1	Rpn family recombination-promoting nuclease/putative transposase	74.4	57.4	43.9
MGA_1140	LOCUS_11370	sequence1:1135445..1136059(-)	partial			WP_015776620.1	SDR family oxidoreductase	69.6	64.7	38.2
MGA_1148	LOCUS_11450	sequence1:1147981..1148799(-)	frameshift		1148019	WP_003228350.1	osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC	95.2	84.8	33.7
MGA_1153	LOCUS_11500	sequence1:1154164..1155429(+)	partial			WP_010942949.1	sulfate permease	94.3	67.3	38.5
MGA_1160	LOCUS_11570	sequence1:1162386..1163258(+)	frameshift		1162356	WP_126660861.1	IS3 family transposase	97.6	61.6	35.8
MGA_1200	LOCUS_11970	sequence1:1211152..1211847(+)	partial			WP_011969296.1	cysteine hydrolase	73.2	79.3	32.8
MGA_1202	LOCUS_11990	sequence1:1212240..1212812(+)	frameshift		1212096	WP_010921843.1	ABC transporter permease/substrate binding protein	97.9	31.1	48.9
MGA_1209	LOCUS_12060	sequence1:1218097..1218450(-)	partial			WP_003807389.1	non-heme iron oxygenase ferredoxin subunit	73.5	83.5	37.2
MGA_1214	LOCUS_12110	sequence1:1221930..1222802(-)	frameshift		1222831	WP_126660861.1	IS3 family transposase	97.6	61.6	35.8
MGA_1219	LOCUS_12160	sequence1:1225071..1226210(-)	partial			WP_066871170.1	plasmid pRiA4b ORF-3 family protein	48.3	77.5	34.8
MGA_1224	LOCUS_12210	sequence1:1230626..1231090(+)	partial			WP_002263382.1	Abi family protein	87.7	46.6	35.3
MGA_1238	LOCUS_12350	sequence1:1244179..1244820(-)	frameshift		1244852	WP_011089743.1	M20 family metallopeptidase	98.1	55.0	42.4
MGA_1239	LOCUS_12360	sequence1:1244832..1245338(-)	frameshift		1244837	WP_011267549.1	M20 family metallopeptidase	91.1	39.7	40.5
MGA_1246	LOCUS_12430	sequence1:1251141..1251809(-)	frameshift		1252032,1251836,1251893,1251887	WP_000898619.1	sugar diacid recognition domain-containing protein	98.6	59.0	46.8
MGA_1283	LOCUS_12800	sequence1:1290435..1290716(-)	partial			WP_003245781.1	PTS mannose transporter subunit IIABC	100.0	14.3	66.7
MGA_1284	LOCUS_12810	sequence1:1291023..1291346(-)	frameshift,internal_stop_codon	1291038..1291040(-)	1291082	WP_032813481.1	3'(2'),5'-bisphosphate nucleotidase CysQ	73.8	27.0	51.9
MGA_1288	LOCUS_12850	sequence1:1294306..1294593(-)	frameshift,internal_stop_codon	1294312..1294314(-)	1294281,1294323,1294567	WP_011107230.1	NAD-dependent epimerase/dehydratase family protein	82.1	22.4	43.0
MGA_1290	LOCUS_12870	sequence1:1295502..1296098(-)	frameshift		1296148	WP_032813481.1	3'(2'),5'-bisphosphate nucleotidase CysQ	98.5	71.9	51.3
MGA_1293	LOCUS_12900	sequence1:1296896..1297333(-)	partial			WP_011403360.1	SLC13 family permease	97.9	23.2	53.5
MGA_1302	LOCUS_12990	sequence1:1305936..1307216(-)	partial			WP_005902322.1	TRAP transporter large permease subunit	99.5	68.7	52.8
MGA_1303	LOCUS_13000	sequence1:1307217..1307684(-)	partial			WP_005902322.1	TRAP transporter large permease subunit	96.8	24.3	44.7
MGA_1306	LOCUS_13030	sequence1:1309818..1310354(-)	frameshift		1310353	WP_011017182.1	N-acetylmannosamine-6-phosphate 2-epimerase	89.9	71.4	58.8
MGA_1320	LOCUS_13170	sequence1:1329054..1329893(+)	partial			WP_084053047.1	S-layer homology domain-containing protein	60.9	15.0	32.0
MGA_1321	LOCUS_13180	sequence1:1329931..1332063(-)	partial			WP_003243594.1	beta-N-acetylglucosaminidase LytD	31.0	22.5	48.9
MGA_1323	LOCUS_13200	sequence1:1334293..1335708(-)	partial			WP_011461044.1	cell wall-binding repeat-containing protein	29.9	24.0	45.1
MGA_1324	LOCUS_13210	sequence1:1335986..1338514(-)	partial			WP_113304420.1	S-layer homology domain-containing protein	21.7	71.0	36.9
MGA_1328	LOCUS_13250	sequence1:1342252..1343070(-)	partial			WP_162275506.1	phosphodiester glycosidase family protein	31.6	21.1	48.9
MGA_1330	LOCUS_13270	sequence1:1344228..1345823(-)	partial			WP_011393633.1	S-layer homology domain-containing protein	30.1	27.0	26.9
MGA_1340	LOCUS_13370	sequence1:1359704..1360486(-)	frameshift		1360500	WP_000823221.1	nucleoside hydrolase	100.0	83.6	53.8
MGA_1341	LOCUS_13380	sequence1:1360492..1360641(-)	frameshift		1360500	WP_000823221.1	nucleoside hydrolase	89.8	14.1	65.9
MGA_1399	LOCUS_13960	sequence1:1411884..1412465(-)	partial			WP_005060116.1	HNH endonuclease	24.4	25.7	53.2
MGA_1420	LOCUS_14170	sequence1:1432419..1433201(-)	partial			WP_008769912.1	ImmA/IrrE family metallo-endopeptidase	64.6	67.3	27.8
MGA_1427	LOCUS_14240	sequence1:1437329..1437697(+)	partial			WP_003220034.1	transcriptional repressor RghR	74.6	68.1	45.7
MGA_1428	LOCUS_14250	sequence1:1437985..1438413(-)	frameshift,internal_stop_codon	1438440..1438442(-)	1438451	WP_005811701.1	ATP-binding protein	95.1	46.5	30.4
MGA_1431	LOCUS_14280	sequence1:1440255..1440872(-)	partial			WP_011962649.1	hypothetical protein	97.1	44.2	29.4
MGA_1439	LOCUS_14360	sequence1:1447395..1447715(+)	frameshift		1447697	WP_011391836.1	IS3 family transposase	92.5	33.3	62.2
MGA_1440	LOCUS_14370	sequence1:1447738..1448199(+)	frameshift		1447697	WP_011391836.1	IS3 family transposase	95.4	50.0	55.1
MGA_1447	LOCUS_14440	sequence1:1454431..1454943(-)	partial			WP_000716775.1	restriction endonuclease	77.6	69.3	42.4
MGA_1452	LOCUS_14490	sequence1:1457626..1458204(-)	partial			WP_005060116.1	HNH endonuclease	25.5	26.8	53.1
MGA_1454	LOCUS_14510	sequence1:1459201..1459842(+)	partial			WP_011387953.1	restriction endonuclease	46.0	24.8	31.0
MGA_1470	LOCUS_14670	sequence1:1474101..1475222(-)	partial			WP_013389449.1	glycoside hydrolase N-terminal domain-containing protein	80.2	13.2	27.8
MGA_1478	LOCUS_14750	sequence1:1486295..1486858(-)	partial			WP_005060116.1	HNH endonuclease	27.8	28.4	51.9
MGA_1483	LOCUS_14800	sequence1:1490963..1491358(-)	partial			WP_033728358.1	recombinase family protein	95.4	67.0	44.5
MGA_1502	LOCUS_14990	sequence1:1507783..1508607(-)	partial			WP_010965472.1	glycosyltransferase	78.8	66.1	37.2
MGA_1517	LOCUS_15140	sequence1:1526641..1530165(-)	partial			WP_113304420.1	S-layer homology domain-containing protein	15.8	72.2	33.0
MGA_1529	LOCUS_15260	sequence1:1543130..1543747(+)	partial			WP_009925167.1	C39 family peptidase	95.6	59.3	25.9
MGA_1533	LOCUS_15300	sequence1:1544825..1545772(-)	internal_stop_codon	1544762..1544764(-)		WP_011391719.1	Rpn family recombination-promoting nuclease/putative transposase	73.3	73.5	52.4
MGA_1540	LOCUS_15370	sequence1:1550807..1551097(-)	partial			WP_000788443.1	hypothetical protein	78.1	62.0	35.0
MGA_1552	LOCUS_15490	sequence1:1559469..1559756(-)	partial			WP_213084042.1	sporulation transcriptional regulator SpoIIID	89.5	64.4	80.0
MGA_1554	LOCUS_15510	sequence1:1561799..1562746(-)	partial			WP_003227751.1	stage II sporulation protein spoIIQ	73.3	81.6	40.1
MGA_1563	LOCUS_15600	sequence1:1571939..1572376(-)	frameshift		1572429	WP_003245702.1	dipeptide ABC transporter permease DppC	100.0	45.3	84.8
MGA_1564	LOCUS_15610	sequence1:1572400..1572897(-)	frameshift		1572429	WP_003245702.1	dipeptide ABC transporter permease DppC	84.8	43.8	67.9
MGA_1606	LOCUS_16030	sequence1:1611846..1612370(-)	partial			WP_000346286.1	DNA-directed RNA polymerase subunit delta	54.6	54.0	50.5
MGA_1628	LOCUS_16250	sequence1:1638014..1638391(+)	partial			WP_003227448.1	spore coat protein GerQ	67.2	46.4	75.0
MGA_1661	LOCUS_16580	sequence1:1677184..1678137(+)	partial			WP_002365717.1	SGNH/GDSL hydrolase family protein	68.5	81.6	38.5
MGA_1671	LOCUS_16680	sequence1:1687062..1687598(-)	frameshift		1687612	WP_010966892.1	ABC transporter ATP-binding protein	93.3	49.3	67.1
MGA_1672	LOCUS_16690	sequence1:1687595..1688089(-)	frameshift		1687615	WP_010886477.1	oligopeptide ABC transporter ATP-binding protein OppD	95.7	43.9	63.7
MGA_1684	LOCUS_16810	sequence1:1701659..1702498(-)	frameshift		1702524	WP_004398532.1	MATE family efflux transporter	97.8	61.3	56.4
MGA_1685	LOCUS_16820	sequence1:1702495..1703007(-)	frameshift		1702524	WP_004398532.1	MATE family efflux transporter	92.4	35.3	61.8
MGA_1686	LOCUS_16830	sequence1:1703093..1703443(-)	frameshift		1703466	WP_011070823.1	nitronate monooxygenase	100.0	32.0	40.5
MGA_1687	LOCUS_16840	sequence1:1703446..1704126(-)	frameshift		1703469	WP_002025518.1	nitronate monooxygenase family protein	93.8	58.1	42.1
MGA_1717	LOCUS_17140	sequence1:1726386..1726970(-)	partial			WP_010880650.1	superoxide dismutase family protein	71.6	82.8	60.0
MGA_1724	LOCUS_17210	sequence1:1733065..1733961(+)	partial			WP_004399040.1	SH3 domain-containing protein	95.6	55.2	33.6
MGA_1731	LOCUS_17280	sequence1:1740129..1741064(-)	partial			WP_002365307.1	DUF2877 domain-containing protein	62.4	65.3	26.1
MGA_1741	LOCUS_17380	sequence1:1754295..1754960(-)	partial			WP_165203633.1	DUF421 domain-containing protein	67.9	76.1	53.3
MGA_1749	LOCUS_17460	sequence1:1762914..1763108(-)	partial			WP_003223835.1	sec-independent protein translocase protein TatAD	75.0	68.6	54.2
MGA_1756	LOCUS_17530	sequence1:1770187..1770369(-)	partial			WP_000492443.1	twin-arginine translocase TatA/TatE family subunit	60.0	59.0	72.2
MGA_1777	LOCUS_17740	sequence1:1787061..1788056(+)	partial			WP_010989959.1	phage replisome organizer N-terminal domain-containing protein	43.5	48.8	28.8
MGA_1792	LOCUS_17890	sequence1:1801074..1801739(-)	frameshift		1801744	WP_001831928.1	CNNM domain-containing protein	62.4	40.2	52.9
MGA_1793	LOCUS_17900	sequence1:1801712..1802293(-)	frameshift		1801744	WP_001831928.1	CNNM domain-containing protein	95.3	54.0	56.5
MGA_1794	LOCUS_17910	sequence1:1802438..1803643(-)	partial			WP_001075741.1	superoxide dismutase	52.6	69.4	64.9
MGA_1822	LOCUS_18190	sequence1:1831847..1832464(-)	partial			WP_052270463.1	glycosyltransferase	83.9	24.5	37.9
MGA_1826	LOCUS_18230	sequence1:1834567..1835037(+)	partial			WP_000747561.1	CAP domain-containing protein	93.6	53.3	60.3
MGA_1828	LOCUS_18250	sequence1:1836602..1836910(-)	partial			WP_010939526.1	XRE family transcriptional regulator	87.3	47.3	38.2
MGA_1831	LOCUS_18280	sequence1:1838943..1840781(-)	partial			WP_164930103.1	YhgE/Pip domain-containing protein	46.4	23.7	22.4
MGA_1844	LOCUS_18410	sequence1:1854900..1855697(+)	partial			WP_071521818.1	SafA/ExsA family spore coat assembly protein	59.2	53.8	40.6
MGA_1845	LOCUS_18420	sequence1:1856198..1857007(+)	partial			WP_235045033.1	transposase	56.5	52.6	30.5
MGA_1846	LOCUS_18430	sequence1:1857174..1858745(+)	partial			WP_011461093.1	helix-turn-helix domain-containing protein	51.8	65.8	25.1
MGA_1877	LOCUS_18740	sequence1:1893491..1894981(-)	partial			WP_011393899.1	peptidoglycan DD-metalloendopeptidase family protein	60.3	63.2	36.3
MGA_1881	LOCUS_18780	sequence1:1898697..1900016(-)	frameshift		1900018	WP_001113900.1	DHH family phosphoesterase	99.3	66.4	64.9
MGA_1882	LOCUS_18790	sequence1:1900013..1900669(-)	frameshift		1900021	WP_003242517.1	cyclic-di-AMP phosphodiesterase GdpP	99.1	32.8	45.4
MGA_1915	LOCUS_19120	sequence1:1932879..1933124(+)	frameshift		1932780,1932789,1932783	WP_001282864.1	DNA gyrase subunit A	75.3	7.4	57.4
MGA_1950	LOCUS_19460	sequence1:1964388..1965587(+)	frameshift		1965539	WP_000134147.1	methionine--tRNA ligase	100.0	62.0	73.6
MGA_1951	LOCUS_19470	sequence1:1965596..1966345(+)	frameshift		1965539	WP_000134141.1	methionine--tRNA ligase	100.0	37.4	61.0
MGA_1980	LOCUS_19760	sequence1:1996739..1998472(+)	frameshift		1998301	WP_001079674.1	ATP-dependent zinc metalloprotease FtsH	90.3	82.5	68.3
MGA_1981	LOCUS_19770	sequence1:1998403..1998744(+)	frameshift		1998301	WP_003733155.1	ATP-dependent zinc metalloprotease FtsH	82.3	13.2	49.5
MGA_2005	LOCUS_19970	sequence1:2031088..2031300(+)	frameshift		2031058	WP_000564262.1	Mini-ribonuclease 3	90.0	46.7	68.3
MGA_2050	LOCUS_20420	sequence1:2063553..2063891(+)	partial			WP_009966385.1	30S ribosomal protein S11	73.2	62.6	76.8
MGA_2082	LOCUS_20720	sequence1:2095618..2096643(+)	frameshift		2096577	WP_000521474.1	phosphoglucosamine mutase	94.4	72.1	76.2
MGA_2083	LOCUS_20730	sequence1:2096637..2096963(+)	frameshift		2096583	WP_000521474.1	phosphoglucosamine mutase	97.2	23.4	59.0
MGA_2116	LOCUS_21060	sequence1:2128454..2129197(-)	partial			WP_011027888.1	ABC transporter permease/substrate binding protein	96.0	27.1	40.2
MGA_2121	LOCUS_21110	sequence1:2131887..2132378(-)	frameshift		2131876,2131901	WP_012256687.1	energy coupling factor transporter S component ThiW	96.3	22.0	43.7
MGA_2154	LOCUS_21440	sequence1:2161677..2162093(-)	frameshift		2162092	WP_003159249.1	anthranilate synthase component I	94.9	27.8	65.6
MGA_2155	LOCUS_21450	sequence1:2162090..2163082(-)	frameshift		2162092	WP_003269846.1	anthranilate synthase component I	96.7	67.8	48.1
MGA_2157	LOCUS_21470	sequence1:2165428..2165904(-)	partial			WP_042680609.1	DUF438 domain-containing protein	84.8	29.4	35.6
MGA_2163	LOCUS_21530	sequence1:2169691..2170716(-)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	55.4	69.2	54.0
MGA_2188	LOCUS_21780	sequence1:2194068..2194841(-)	frameshift		2194849	WP_012546313.1	histidinol dehydrogenase	96.9	58.9	58.2
MGA_2189	LOCUS_21790	sequence1:2194760..2195353(-)	frameshift		2194846	WP_010964255.1	histidinol dehydrogenase	75.1	34.3	42.6
MGA_2217	LOCUS_22070	sequence1:2217877..2219196(+)	partial			WP_000730417.1	HAMP domain-containing sensor histidine kinase	49.4	46.1	36.7
MGA_2226	LOCUS_22160	sequence1:2227074..2227622(+)	frameshift		2227613	WP_003243030.1	arsenic transporter	96.2	40.2	76.0
MGA_2227	LOCUS_22170	sequence1:2227619..2228371(+)	frameshift		2227613	WP_003243030.1	arsenic transporter	93.6	53.8	69.2
MGA_2230	LOCUS_22200	sequence1:2229341..2230498(+)	partial			WP_000887601.1	CapA family protein	76.1	70.6	38.1
MGA_2233	LOCUS_22230	sequence1:2231870..2232502(-)	partial			WP_000943353.1	VOC family protein	74.3	58.9	40.9
MGA_2273	LOCUS_22610	sequence1:2273409..2273645(-)	partial			WP_047210621.1	site-specific integrase	84.6	16.2	50.0
MGA_2277	LOCUS_22650	sequence1:2276774..2277619(-)	partial			WP_000179343.1	tyrosine-type recombinase/integrase	90.4	64.9	38.7
MGA_2278	LOCUS_22660	sequence1:2277594..2278073(-)	partial			WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	86.2	74.7	37.8
MGA_2300	LOCUS_22880	sequence1:2292565..2293179(+)	frameshift		2293131	WP_000739648.1	chromate transporter	92.6	47.6	51.6
MGA_2301	LOCUS_22890	sequence1:2293131..2293514(+)	frameshift		2293131	WP_000739648.1	chromate transporter	98.4	31.8	57.6
MGA_2303	LOCUS_22910	sequence1:2294395..2295468(+)	frameshift		2294386	WP_004190115.1	haloacid dehalogenase-like hydrolase	98.9	81.8	42.0
MGA_2309	LOCUS_22970	sequence1:2300436..2300858(+)	partial			WP_000119510.1	MgtC/SapB family protein	72.9	43.8	53.4
MGA_2316	LOCUS_23040	sequence1:2306034..2306651(+)	partial			WP_011970282.1	tyrosine-type recombinase/integrase	93.2	56.4	44.0
MGA_2317	LOCUS_23050	sequence1:2307084..2308139(+)	partial			WP_015261158.1	IS21 family transposase	78.6	53.5	45.7
MGA_2338	LOCUS_23260	sequence1:2326003..2326875(+)	partial			WP_003317528.1	hypothetical protein	34.5	75.4	46.0
MGA_2341	LOCUS_23290	sequence1:2328447..2329505(+)	partial			WP_048066275.1	PKD domain-containing protein	69.6	14.8	38.1
MGA_2357	LOCUS_23450	sequence1:2339129..2339470(+)	partial			WP_002387408.1	MetQ/NlpA family ABC transporter substrate-binding protein	97.3	42.3	39.1
MGA_2360	LOCUS_23480	sequence1:2341953..2343425(+)	partial			WP_010886611.1	ATP-binding cassette domain-containing protein	61.8	68.3	41.8
MGA_2364	LOCUS_23520	sequence1:2345730..2346365(+)	frameshift		2346317	WP_011836536.1	cobyric acid synthase	90.0	37.9	58.4
MGA_2365	LOCUS_23530	sequence1:2346452..2347159(+)	frameshift		2346317	WP_010964683.1	cobyric acid synthase	90.6	43.4	42.1
MGA_2367	LOCUS_23550	sequence1:2348458..2349141(+)	frameshift		2349126	WP_001832263.1	NtaA/DmoA family FMN-dependent monooxygenase	99.6	52.1	66.8
MGA_2368	LOCUS_23560	sequence1:2349102..2349686(+)	frameshift		2349129	WP_001832263.1	NtaA/DmoA family FMN-dependent monooxygenase	99.0	44.2	62.5
MGA_2376	LOCUS_23640	sequence1:2358218..2358604(-)	frameshift		2358660	WP_011070544.1	EAL domain-containing protein	93.0	11.0	49.6
MGA_2377	LOCUS_23650	sequence1:2358643..2358996(-)	frameshift		2359187,2358644	WP_010942659.1	EAL domain-containing protein	99.1	14.5	50.0
MGA_2378	LOCUS_23660	sequence1:2359173..2360312(-)	frameshift		2359186,2359732,2359757	WP_065525186.1	DUF4084 domain-containing protein	91.6	45.2	28.9
MGA_2384	LOCUS_23720	sequence1:2364868..2365116(-)	partial			WP_048147002.1	cyclic 2,3-diphosphoglycerate synthase	96.3	20.8	40.9
MGA_2385	LOCUS_23730	sequence1:2365205..2365393(-)	partial			WP_011251150.1	cyclic 2,3-diphosphoglycerate synthase	69.4	9.6	51.2
MGA_2397	LOCUS_23850	sequence1:2376105..2376533(+)	frameshift		2376063	WP_033728358.1	recombinase family protein	100.0	73.3	76.8
MGA_2407	LOCUS_23950	sequence1:2389520..2389981(+)	frameshift		2389942,2389412,2389446	WP_005808317.1	IS4-like element ISDha5 family transposase	92.2	31.1	51.8
MGA_2408	LOCUS_23960	sequence1:2389965..2390342(+)	frameshift		2389942	WP_041272295.1	IS4-like element ISDha5 family transposase	100.0	27.3	52.0
MGA_2409	LOCUS_23970	sequence1:2390772..2391443(+)	partial			WP_002267360.1	toll/interleukin-1 receptor domain-containing protein	52.5	42.1	41.9
MGA_2413	LOCUS_24010	sequence1:2394769..2395242(-)	partial			WP_003232721.1	ImmA/IrrE family metallo-endopeptidase	87.3	74.7	37.8
MGA_2433	LOCUS_24210	sequence1:2407142..2408521(-)	partial			WP_001032106.1	sensory box histidine kinase PhoR	91.9	71.6	47.4
MGA_2447	LOCUS_24350	sequence1:2420712..2421878(+)	partial			WP_011987096.1	excinuclease ABC subunit UvrA	100.0	52.0	47.3
MGA_2449	LOCUS_24370	sequence1:2422705..2424270(+)	frameshift		2424162	WP_001155278.1	formate dehydrogenase subunit alpha	93.5	49.4	65.1
MGA_2450	LOCUS_24380	sequence1:2424213..2425667(+)	frameshift		2424168	WP_003245240.1	formate dehydrogenase subunit alpha	97.9	48.1	63.5
MGA_2457	LOCUS_24450	sequence1:2431633..2433024(-)	partial			WP_010938454.1	ATP-binding protein	96.3	43.3	27.3
MGA_2467	LOCUS_24550	sequence1:2445405..2446514(-)	partial			WP_003400907.1	sensor histidine kinase efflux regulator BaeS	84.8	67.6	30.2
MGA_2481	LOCUS_24690	sequence1:2456556..2456933(+)	frameshift		2456924	WP_005811616.1	D-alanyl-D-alanine carboxypeptidase family protein	98.4	29.8	41.3
MGA_2482	LOCUS_24700	sequence1:2456948..2457619(+)	frameshift		2456924	WP_001252638.1	D-alanyl-D-alanine carboxypeptidase DacB	77.1	44.4	40.3
MGA_2501	LOCUS_24890	sequence1:2477003..2477563(+)	partial			WP_041272486.1	type II toxin-antitoxin system Phd/YefM family antitoxin	96.2	70.4	40.9
MGA_2513	LOCUS_25010	sequence1:2489063..2489749(+)	frameshift		2489683	WP_011101892.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	90.4	40.4	59.2
MGA_2514	LOCUS_25020	sequence1:2489746..2490585(+)	frameshift		2489680	WP_000745444.1	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	99.6	54.4	63.3
MGA_2517	LOCUS_25050	sequence1:2493485..2494015(+)	partial			WP_000722821.1	iron-siderophore ABC transporter substrate-binding protein	97.7	52.5	39.5
MGA_2535	LOCUS_25230	sequence1:2515835..2516479(+)	partial			WP_099799101.1	ABC transporter ATP-binding protein	91.6	55.3	48.5
MGA_2543	LOCUS_25310	sequence1:2522127..2522507(+)	partial			WP_003734055.1	potassium channel family protein	95.2	48.2	36.4
MGA_2567	LOCUS_25550	sequence1:2549602..2550393(+)	partial			WP_000747596.1	CAP domain-containing protein	67.7	63.6	56.7
MGA_2573	LOCUS_25610	sequence1:2554602..2555321(+)	frameshift		2555213	WP_003242564.1	YihY family inner membrane protein	92.1	78.2	45.9
MGA_2574	LOCUS_25620	sequence1:2555228..2555422(+)	frameshift		2555210	WP_009930650.1	YihY/virulence factor BrkB family protein	95.3	21.1	65.6
MGA_2585	LOCUS_25730	sequence1:2567351..2570338(-)	partial			WP_010941142.1	EAL domain-containing protein	57.6	72.0	36.6
MGA_2601	LOCUS_25890	sequence1:2587593..2587982(+)	partial			WP_000964343.1	potassium channel family protein	66.7	64.9	48.3
MGA_2611	LOCUS_25970	sequence1:2601975..2604455(-)	partial			WP_012775094.1	AAA family ATPase	34.6	51.0	60.1
MGA_2612	LOCUS_25980	sequence1:2604940..2605776(-)	partial			WP_050298440.1	polysaccharide deacetylase family protein	85.6	54.5	39.2
MGA_2615	LOCUS_26010	sequence1:2608174..2608587(+)	partial			WP_003243362.1	undecaprenyl-diphosphate phosphatase BcrC	94.2	67.9	37.4
MGA_2624	LOCUS_26100	sequence1:2618416..2619759(+)	partial			WP_011057451.1	EAL domain-containing protein	74.7	25.1	29.2
MGA_2633	LOCUS_26190	sequence1:2627540..2628079(+)	partial			WP_000871089.1	TatD family hydrolase	96.1	66.2	46.8
MGA_2655	LOCUS_26410	sequence1:2648275..2648877(+)	partial			WP_010880650.1	superoxide dismutase family protein	71.0	84.6	51.0
MGA_2662	LOCUS_26480	sequence1:2654257..2655183(+)	frameshift		2655030	WP_004192518.1	acetyl-CoA C-acyltransferase family protein	82.1	64.5	50.8
MGA_2663	LOCUS_26490	sequence1:2655116..2655433(+)	frameshift		2655057	WP_011459196.1	acetyl-CoA C-acetyltransferase	98.1	26.3	69.9
MGA_2679	LOCUS_26650	sequence1:2673726..2674664(+)	partial			WP_012256099.1	DUF4349 domain-containing protein	70.5	71.3	30.2
MGA_2691	LOCUS_26770	sequence1:2684546..2684863(-)	frameshift		2685107	WP_010890710.1	alpha-keto acid decarboxylase family protein	99.0	18.8	58.7
MGA_2692	LOCUS_26780	sequence1:2684827..2685033(-)	frameshift		2685110	WP_010890710.1	alpha-keto acid decarboxylase family protein	80.9	9.9	65.5
MGA_2693	LOCUS_26790	sequence1:2685093..2686121(-)	frameshift		2685110	WP_010890710.1	alpha-keto acid decarboxylase family protein	98.8	61.0	68.0
MGA_2695	LOCUS_26810	sequence1:2688217..2688663(-)	partial			WP_211477810.1	FixH family protein	100.0	57.7	40.4
MGA_2703	LOCUS_26890	sequence1:2696941..2697138(+)	partial			WP_011021362.1	YwbE family protein	92.3	74.1	61.7
MGA_2704	LOCUS_26900	sequence1:2697492..2697857(+)	partial			WP_011476321.1	type II toxin-antitoxin system death-on-curing family toxin	58.7	58.5	41.7
MGA_2725	LOCUS_27110	sequence1:2718499..2718855(-)	frameshift		2719010	WP_003229139.1	bacitracin ABC transporter permease BceB	98.3	18.0	80.2
MGA_2726	LOCUS_27120	sequence1:2718870..2720465(-)	frameshift		2719010	WP_003229139.1	bacitracin ABC transporter permease BceB	91.3	73.8	50.2
MGA_2728	LOCUS_27140	sequence1:2721310..2722050(-)	frameshift		2722145	WP_004398652.1	two-component sensor histidine kinase BceS	98.8	72.8	57.6
MGA_2749	LOCUS_27350	sequence1:2743618..2745102(+)	partial			WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	99.2	72.5	56.5
MGA_2752	LOCUS_27380	sequence1:2746971..2747885(-)	partial			WP_003245705.1	polysaccharide deacetylase family protein	65.8	71.6	42.6
MGA_2756	LOCUS_27420	sequence1:2750714..2751787(+)	frameshift		2751757	WP_164930267.1	MDR family MFS transporter	92.2	71.1	55.6
MGA_2757	LOCUS_27430	sequence1:2751784..2752122(+)	frameshift		2751757	WP_164930267.1	MDR family MFS transporter	97.3	24.1	59.5
MGA_2761	LOCUS_27470	sequence1:2754636..2755100(+)	partial			WP_003732560.1	RDD family protein	86.4	73.0	47.4
MGA_2772	LOCUS_27580	sequence1:2766130..2767356(+)	frameshift		2767311	WP_011082593.1	ABC-ATPase domain-containing protein	96.1	68.8	52.0
MGA_2773	LOCUS_27590	sequence1:2767353..2767835(+)	frameshift		2767311	WP_012804193.1	ABC-ATPase domain-containing protein	94.4	25.9	32.3
MGA_2788	LOCUS_27740	sequence1:2784505..2785152(+)	partial			WP_037401426.1	Do family serine endopeptidase	69.8	30.3	35.0
MGA_2789	LOCUS_27750	sequence1:2785179..2785481(+)	partial			WP_002082432.1	RNA polymerase sigma factor SigI	97.0	40.4	39.2
MGA_2791	LOCUS_27770	sequence1:2786047..2786742(+)	partial			WP_003245125.1	YhcN/YlaJ family sporulation lipoprotein	65.8	59.3	30.3
MGA_2820	LOCUS_28060	sequence1:2814399..2815355(+)	partial			WP_011836478.1	ABC transporter permease/substrate binding protein	84.9	45.8	40.8
MGA_2841	LOCUS_28270	sequence1:2834687..2834815(-)	partial			WP_010886464.1	protein YhfH	81.0	73.9	55.9
MGA_2854	LOCUS_28400	sequence1:2850150..2850788(+)	partial			WP_118837921.1	SCO family protein	75.5	55.4	30.7
MGA_2864	LOCUS_28500	sequence1:2857087..2858580(+)	partial			WP_003130373.1	glycoside hydrolase family 13 protein	74.6	69.3	27.2
MGA_2871	LOCUS_28570	sequence1:2865220..2865813(+)	partial			WP_011014185.1	nitrate reductase molybdenum cofactor assembly chaperone	65.0	56.6	30.5
MGA_2894	LOCUS_28800	sequence1:2882274..2882768(-)	frameshift		2882791	WP_000434794.1	undecaprenyl-diphosphate phosphatase	100.0	60.4	63.4
MGA_2895	LOCUS_28810	sequence1:2882714..2883097(-)	frameshift		2882791	WP_000434782.1	undecaprenyl-diphosphate phosphatase	80.3	37.8	57.8
MGA_2920	LOCUS_29060	sequence1:2908355..2909575(+)	partial			WP_124797038.1	putative glycoside hydrolase	80.3	69.4	36.2
MGA_2926	LOCUS_29120	sequence1:2915587..2915736(+)	frameshift		2915551	WP_000003348.1	oligoendopeptidase F	69.4	5.6	76.5
MGA_2960	LOCUS_29460	sequence1:2939805..2942213(-)	partial			WP_012047792.1	phage tail tape measure protein	39.7	33.1	39.8
MGA_2973	LOCUS_29590	sequence1:2949238..2949435(-)	partial			WP_003234072.1	sec-independent protein translocase protein TatAY	60.0	68.4	66.7
MGA_2990	LOCUS_29760	sequence1:2966644..2967456(+)	frameshift		2966594	WP_002287048.1	NAD(P)H-quinone oxidoreductase	97.8	81.0	63.4
MGA_3000	LOCUS_29850	sequence1:2978498..2978749(+)	partial			WP_011392792.1	twin-arginine translocase TatA/TatE family subunit	55.4	63.0	54.3
MGA_3014	LOCUS_29990	sequence1:2995472..2996590(-)	frameshift		2996607	WP_012048319.1	Na+/H+ antiporter NhaC family protein	98.7	82.5	53.7
MGA_3015	LOCUS_30000	sequence1:2996497..2996814(-)	frameshift		2996607	WP_000665496.1	Na+/H+ antiporter NhaC family protein	59.0	14.2	51.6
MGA_3020	LOCUS_30050	sequence1:2999551..3000141(-)	partial			WP_000771018.1	LysM peptidoglycan-binding domain-containing protein	87.8	64.9	50.6
MGA_3021	LOCUS_30060	sequence1:3000517..3002340(+)	partial			WP_011861393.1	hypothetical protein	58.3	77.0	23.5
MGA_3044	LOCUS_30290	sequence1:3031703..3032254(+)	partial			WP_005899343.1	DUF1311 domain-containing protein	56.8	73.0	33.7
MGA_3060	LOCUS_30450	sequence1:3046548..3047135(-)	frameshift		3046586	WP_000217519.1	hypothetical protein	91.3	77.5	52.8
MGA_3064	LOCUS_30490	sequence1:3050921..3051247(+)	partial			WP_010880936.1	hypothetical protein	73.1	42.7	40.5
MGA_3069	LOCUS_30540	sequence1:3055691..3055981(+)	partial			WP_005814351.1	DUF4183 domain-containing protein	86.5	7.9	50.6
MGA_3091	LOCUS_30760	sequence1:3079106..3079363(+)	frameshift		3079348	WP_012258069.1	aspartate aminotransferase family protein	87.1	15.7	44.6
MGA_3093	LOCUS_30780	sequence1:3080595..3081233(+)	partial			WP_003245514.1	bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein	98.6	40.7	51.2
MGA_3107	LOCUS_30920	sequence1:3098323..3098964(+)	partial			WP_010886586.1	A24 family peptidase	61.0	53.2	31.1
MGA_3110	LOCUS_30950	sequence1:3100316..3101443(+)	partial			WP_003360024.1	septum site-determining protein MinD	51.7	71.7	27.8
MGA_3113	LOCUS_30980	sequence1:3103685..3104611(+)	partial			WP_011030001.1	DUF5936 domain-containing protein	74.4	76.3	32.6
MGA_3122	LOCUS_31070	sequence1:3109442..3110779(+)	partial			WP_005898539.1	VWA domain-containing protein	69.2	64.5	27.5
MGA_3127	LOCUS_31120	sequence1:3114260..3115468(-)	partial			WP_000312201.1	DnaD domain protein	20.6	29.0	39.8
MGA_3144	LOCUS_31290	sequence1:3129761..3130615(+)	partial			WP_000189676.1	cobyric acid synthase	83.1	46.4	52.5
MGA_3160	LOCUS_31450	sequence1:3144894..3145058(+)	frameshift		3144870	WP_013530410.1	FAD-dependent oxidoreductase	98.1	13.1	56.6
MGA_3190	LOCUS_31750	sequence1:3173240..3173422(+)	partial			WP_012583031.1	PspC domain-containing protein	95.0	52.1	45.2
MGA_3199	LOCUS_31840	sequence1:3179918..3181606(-)	partial			WP_164925941.1	EAL domain-containing protein	95.7	44.7	40.0
MGA_3247	LOCUS_32300	sequence1:3231114..3231515(+)	partial			WP_003232799.1	DUF1641 domain-containing protein	99.2	71.5	33.1
MGA_3257	LOCUS_32400	sequence1:3239023..3239370(-)	partial			WP_000095399.1	stage V sporulation protein AC	98.3	71.5	79.6
MGA_3259	LOCUS_32420	sequence1:3240107..3240232(-)	internal_stop_codon	3240107..3240109(-)		WP_000216166.1	DUF1657 domain-containing protein	100.0	60.3	65.9
MGA_3262	LOCUS_32450	sequence1:3242338..3243219(+)	frameshift		3243138	WP_000545021.1	GTP 3',8-cyclase MoaA	92.5	80.4	63.1
MGA_3263	LOCUS_32460	sequence1:3243123..3243347(+)	frameshift		3243138	WP_042875820.1	GTP 3',8-cyclase MoaA	93.2	20.5	47.8
MGA_3282	LOCUS_32650	sequence1:3261001..3261501(+)	internal_stop_codon	3261499..3261501(+)		WP_003722876.1	N-acetyldiaminopimelate deacetylase	91.0	41.0	50.0
MGA_3283	LOCUS_32660	sequence1:3261514..3261663(+)	internal_stop_codon	3261499..3261501(+)		WP_000301163.1	N-acetyldiaminopimelate deacetylase	73.5	9.6	63.9
MGA_3287	LOCUS_32700	sequence1:3263772..3264410(+)	internal_stop_codon	3264408..3264410(+)		WP_009967136.1	ABC transporter ATP-binding protein	100.0	36.2	61.8
MGA_3288	LOCUS_32710	sequence1:3264507..3265520(+)	internal_stop_codon	3264408..3264410(+)		WP_009967136.1	ABC transporter ATP-binding protein	98.5	56.9	65.2
MGA_3297	LOCUS_32800	sequence1:3275202..3275963(+)	frameshift		3275906	WP_003232311.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	92.9	56.1	55.6
MGA_3298	LOCUS_32810	sequence1:3276122..3276490(+)	frameshift		3275900	WP_000863427.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	100.0	28.4	82.0
MGA_3301	LOCUS_32840	sequence1:3280215..3281093(+)	partial			WP_030868999.1	polysaccharide deacetylase family protein	66.4	66.3	30.0
MGA_3308	LOCUS_32910	sequence1:3285177..3285494(+)	partial			WP_000893654.1	YlaH-like family protein	73.3	76.0	48.1
MGA_3334	LOCUS_33170	sequence1:3308399..3308713(+)	frameshift		3308659	WP_003245283.1	pantetheine-phosphate adenylyltransferase	85.6	55.3	62.9
MGA_3335	LOCUS_33180	sequence1:3308695..3308883(+)	frameshift		3308665	WP_000200598.1	pantetheine-phosphate adenylyltransferase	95.2	36.2	78.0
MGA_3394	LOCUS_33770	sequence1:3373676..3374236(+)	frameshift		3374176	WP_003232068.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	88.2	36.7	53.0
MGA_3395	LOCUS_33780	sequence1:3374146..3375021(+)	frameshift		3374164	WP_001249680.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	97.9	64.9	45.5
MGA_3433	LOCUS_34160	sequence1:3411899..3413161(+)	partial			WP_003245096.1	hypothetical protein	45.0	32.3	29.1
MGA_3448	LOCUS_34310	sequence1:3427573..3428340(+)	partial			WP_005478070.1	flagellar assembly protein FliH	73.3	79.3	23.1
MGA_3456	LOCUS_34390	sequence1:3434108..3434290(+)	partial			WP_003231966.1	swarming motility protein SwrD	75.0	63.4	55.6
MGA_3494	LOCUS_34770	sequence1:3472070..3472471(+)	frameshift		3472453	WP_003244721.1	polysaccharide deacetylase family protein	96.2	40.1	46.1
MGA_3495	LOCUS_34780	sequence1:3472465..3473025(+)	frameshift		3472453	WP_003244721.1	polysaccharide deacetylase family protein	100.0	58.3	54.3
MGA_3526	LOCUS_35090	sequence1:3504440..3505225(+)	frameshift		3505213	WP_003245569.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	98.5	81.8	51.8
MGA_3543	LOCUS_35260	sequence1:3518918..3520036(+)	partial			WP_003245779.1	sporulation kinase KinA	80.1	49.8	39.2
MGA_3560	LOCUS_35430	sequence1:3537126..3538028(+)	frameshift		3537974	WP_003231527.1	acyl-CoA carboxylase subunit beta	98.0	57.5	70.7
MGA_3561	LOCUS_35440	sequence1:3538103..3538654(+)	frameshift		3537974	WP_000886744.1	acyl-CoA carboxylase subunit beta	100.0	35.7	79.2
MGA_3566	LOCUS_35490	sequence1:3545019..3545987(+)	internal_stop_codon	3545985..3545987(+)		WP_000658347.1	D-serine ammonia-lyase	98.4	72.4	56.7
MGA_3567	LOCUS_35500	sequence1:3546093..3546323(+)	internal_stop_codon	3545985..3545987(+)		WP_000658539.1	D-serine ammonia-lyase	100.0	18.5	48.8
MGA_3579	LOCUS_35620	sequence1:3557482..3558672(+)	partial			WP_010886566.1	M14 family metallocarboxypeptidase	72.2	77.1	49.3
MGA_3582	LOCUS_35650	sequence1:3560105..3560554(-)	partial			WP_003246095.1	YqfQ family protein	71.8	41.7	33.6
MGA_3585	LOCUS_35680	sequence1:3562029..3562220(-)	partial			WP_003223835.1	sec-independent protein translocase protein TatAD	58.7	52.9	73.0
MGA_3590	LOCUS_35730	sequence1:3564800..3565801(+)	partial			WP_003244816.1	peptidoglycan endopeptidase LytE	76.9	73.4	34.7
MGA_3623	LOCUS_36040	sequence2:1178..1507(+)	frameshift		1050,1158	WP_011391904.1	tyrosine-type recombinase/integrase	87.2	27.0	35.8
MGA_3626	LOCUS_36070	sequence2:3561..3743(-)	partial			WP_121450865.1	IS3 family transposase	96.7	15.5	63.8
MGA_3628	LOCUS_36090	sequence2:5445..6062(-)	frameshift		5480,6093	WP_106004846.1	IS3 family transposase	94.1	51.6	63.7
MGA_3629	LOCUS_36100	sequence2:6073..6369(-)	frameshift		6093	WP_121450865.1	IS3 family transposase	91.8	24.1	52.2
MGA_3634	LOCUS_36150	sequence2:9072..9443(-)	partial			WP_000779891.1	N-acetylmuramoyl-L-alanine amidase	100.0	37.8	46.8
MGA_3638	LOCUS_36190	sequence2:10866..11057(+)	partial			WP_003228484.1	sigma-O factor regulator RsoA	88.9	70.9	46.4
MGA_3661	LOCUS_36420	sequence2:30186..30368(-)	partial			WP_121450865.1	IS3 family transposase	96.7	15.5	63.8
MGA_3663	LOCUS_36440	sequence2:32070..32687(-)	frameshift		32104,32717,32759	WP_106004846.1	IS3 family transposase	94.1	51.6	63.7
MGA_3664	LOCUS_36450	sequence2:32748..32993(-)	frameshift		32717,32759	WP_121450865.1	IS3 family transposase	80.2	17.4	49.2
MGA_3669	LOCUS_36500	sequence2:35696..36067(-)	partial			WP_000779891.1	N-acetylmuramoyl-L-alanine amidase	100.0	37.8	46.8
MGA_3673	LOCUS_36540	sequence2:37490..37681(+)	partial			WP_003228484.1	sigma-O factor regulator RsoA	88.9	70.9	46.4
MGA_3688	LOCUS_36690	sequence2:48243..48545(+)	partial			WP_000608644.1	IS1380-like element ISEcp1 family transposase	93.0	22.1	28.0
MGA_3699	LOCUS_36800	sequence3:4032..4337(+)	frameshift		4026	WP_011391904.1	tyrosine-type recombinase/integrase	94.1	27.0	35.8
MGA_3706	LOCUS_36870	sequence3:8587..8856(-)	frameshift		8905,8362,8971,8848,8434,9013,9046,8983,8920,8629,8605,8863	WP_106004846.1	IS3 family transposase	80.9	19.3	59.7