{ "type": "genome", "identifier": "GCF_005930495.1", "organism": "Modestobacter excelsi", "title": "Modestobacter excelsi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nicolaus Copernicus University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_005930495.1", "bioproject": "PRJNA224116", "biosample": "SAMN10967232", "wgs_master": "SJEX00000000.1", "refseq_category": "reference genome", "taxid": "2213161", "species_taxid": "2213161", "organism_name": "Modestobacter excelsi", "infraspecific_name": "strain=1G6", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/03", "asm_name": "ASM593049v1", "asm_submitter": "Nicolaus Copernicus University", "gbrs_paired_asm": "GCA_005930495.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/005/930/495/GCF_005930495.1_ASM593049v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5255906", "genome_size_ungapped": "5255906", "gc_percent": "73.500000", "replicon_count": "0", "scaffold_count": "178", "contig_count": "178", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_005930495.1-RS_2024_08_07", "annotation_date": "2024-08-07", "total_gene_count": "5074", "protein_coding_gene_count": "4908", "non_coding_gene_count": "56", "pubmed_id": "31892483" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-03", "dateModified": "2019-06-03", "datePublished": "2019-06-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Modestobacter excelsi" ], "sample_taxid": [ "2213161" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Chile" ], 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"conclusive" }, { "organism_name": "Modestobacter altitudinis", "strain": "strain=1G4", "accession": "GCA_005930475.1", "taxid": 2213158, "species_taxid": 2213158, "relation_to_type": "type", "validated": true, "ani": 92.7753, "matched_fragments": 1302, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter versicolor", "strain": "strain=DSM 16678", "accession": "GCA_014195485.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 86.9478, "matched_fragments": 1062, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter versicolor", "strain": "strain=CP153-2", "accession": "GCA_003226595.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 86.9099, "matched_fragments": 862, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter muralis", "strain": "strain=DSM 100205", "accession": "GCA_010686625.1", "taxid": 1608614, "species_taxid": 1608614, "relation_to_type": "type", "validated": true, "ani": 84.8315, "matched_fragments": 976, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter muralis", "strain": "strain=DSM 100205", "accession": "GCA_010682105.1", "taxid": 1608614, "species_taxid": 1608614, "relation_to_type": "type", "validated": true, "ani": 84.7625, "matched_fragments": 951, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter roseus", "strain": "strain=DSM 45764", "accession": "GCA_007994135.1", "taxid": 1181884, "species_taxid": 1181884, "relation_to_type": "type", "validated": true, "ani": 84.4899, "matched_fragments": 969, "total_fragments": 1669, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Goekera deserti", "strain": "strain=CPCC 205119", "accession": 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82.306, "matched_fragments": 937, "total_fragments": 1669, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.063, "cell_length": 0.15, "doubling_h": null, "growth_tmp": 26.25, "optimum_tmp": 24.5, "optimum_ph": 7.5, "genome_size": 5015227.25, "gc_content": 74.1, "coding_genes": 5230.0, "rRNA16S_genes": 3.0, "tRNA_genes": 47.0, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.666, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, 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