{ "tc_result": [ { "organism_name": "Emcibacter nanhaiensis", "strain": "strain=MCCC 1A06723", "accession": "GCA_006385175.1", "taxid": 1505037, "species_taxid": 1505037, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1304, "total_fragments": 1309, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Luteithermobacter gelatinilyticus", "strain": "strain=MEBiC09520", "accession": "GCA_005849285.1", "taxid": 2582913, "species_taxid": 2582913, "relation_to_type": "type", "validated": true, "ani": 77.948, "matched_fragments": 350, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paremcibacter congregatus", "strain": "strain=ZYLT", "accession": "GCA_006385135.1", "taxid": 2043170, "species_taxid": 2043170, "relation_to_type": "type", "validated": true, "ani": 77.2265, "matched_fragments": 203, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paremcibacter congregatus", "strain": "strain=ZYL", "accession": "GCA_002740695.1", "taxid": 2043170, "species_taxid": 2043170, "relation_to_type": "type", "validated": true, "ani": 77.1523, "matched_fragments": 208, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kordiimonas marina", "strain": "strain=A6E486", "accession": "GCA_023006325.1", "taxid": 2872312, "species_taxid": 2872312, "relation_to_type": "type", "validated": true, "ani": 76.9173, "matched_fragments": 110, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium cloacae", "strain": "strain=JCM 10874", "accession": "GCA_002355855.1", "taxid": 120107, "species_taxid": 120107, "relation_to_type": "type", "validated": true, "ani": 76.8026, "matched_fragments": 55, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_014640905.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 76.7619, "matched_fragments": 71, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=GYP-11", "accession": "GCA_009910475.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 76.6823, "matched_fragments": 71, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nisaea acidiphila", "strain": "strain=MEBiC11861", "accession": "GCA_024662015.1", "taxid": 1862145, "species_taxid": 1862145, "relation_to_type": "type", "validated": true, "ani": 76.5606, "matched_fragments": 90, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedomonas mirosovicensis", "strain": "strain=A1X5R2", "accession": "GCA_022569295.1", "taxid": 2908641, "species_taxid": 2908641, "relation_to_type": "type", "validated": true, "ani": 76.5285, "matched_fragments": 90, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum ramasamyi", "strain": "strain=M2T2B2", "accession": "GCA_003233655.1", "taxid": 682998, "species_taxid": 682998, "relation_to_type": "type", "validated": true, "ani": 76.5278, "matched_fragments": 119, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eilatimonas milleporae", "strain": "strain=DSM 25217", "accession": "GCA_003688555.1", "taxid": 911205, "species_taxid": 911205, "relation_to_type": "type", "validated": true, "ani": 76.4074, "matched_fragments": 83, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus microcysteis", "strain": "strain=NIBR12", "accession": "GCA_014764365.1", "taxid": 2771361, "species_taxid": 2771361, "relation_to_type": "type", "validated": true, "ani": 76.2252, "matched_fragments": 58, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitrospirillum iridis", "strain": "strain=DSM 22198", "accession": "GCA_014205765.1", "taxid": 765888, "species_taxid": 765888, "relation_to_type": "type", "validated": true, "ani": 76.1933, "matched_fragments": 132, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium cloacae", "strain": "strain=NBRC 102517", "accession": "GCA_001591285.1", "taxid": 120107, "species_taxid": 120107, "relation_to_type": "type", "validated": true, "ani": 76.19, "matched_fragments": 52, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ancylobacter sonchi", "strain": "strain=VKM B-3145", "accession": "GCA_018390695.1", "taxid": 1937790, "species_taxid": 1937790, "relation_to_type": "type", "validated": true, "ani": 76.0612, "matched_fragments": 77, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella pollutisoli", "strain": "strain=KCTC 52677", "accession": "GCA_024609765.1", "taxid": 2250594, "species_taxid": 2250594, "relation_to_type": "type", "validated": true, "ani": 76.0041, "matched_fragments": 73, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus lutimaris", "strain": "strain=CECT 8525", "accession": "GCA_003337565.1", "taxid": 1490030, "species_taxid": 1490030, "relation_to_type": "type", "validated": true, "ani": 76.0035, "matched_fragments": 61, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium fuliginis", "strain": "strain=CCM 7327", "accession": "GCA_014636045.1", "taxid": 336203, "species_taxid": 336203, "relation_to_type": "type", "validated": true, "ani": 75.9827, "matched_fragments": 58, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stella humosa", "strain": "strain=DSM 5900", "accession": "GCA_003751345.1", "taxid": 94, "species_taxid": 94, "relation_to_type": "type", "validated": true, "ani": 75.6515, "matched_fragments": 92, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia adipata", "strain": "strain=DSM 17808", "accession": "GCA_000423225.1", "taxid": 166954, "species_taxid": 166954, "relation_to_type": "type", "validated": true, "ani": 75.3838, "matched_fragments": 87, "total_fragments": 1309, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_006385175.1", "gtdb_species": "s__Emcibacter nanhaiensis", "ani": 100.0, "matched_fragments": 1305, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Emcibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_005849285.1", "gtdb_species": "s__Luteithermobacter gelatinilyticus", "ani": 77.8988, "matched_fragments": 349, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Luteithermobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.04", "min_intra_species_ani": "99.04", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_006385135.1", "gtdb_species": "s__Paremcibacter congregatus", "ani": 77.3036, "matched_fragments": 204, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Paremcibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009882935.1", "gtdb_species": "s__Sneathiella chungangensis", "ani": 76.7764, "matched_fragments": 69, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sneathiellales;f__Sneathiellaceae;g__Sneathiella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003233655.1", "gtdb_species": "s__Azospirillum ramasamyi", "ani": 76.549, "matched_fragments": 118, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003688555.1", "gtdb_species": "s__Eilatimonas milleporae", "ani": 76.4074, "matched_fragments": 83, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Eilatimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_011051815.1", "gtdb_species": "s__Paremcibacter sp011051815", "ani": 76.3476, "matched_fragments": 89, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Paremcibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000730165.1", "gtdb_species": "s__Nitrospirillum amazonense", "ani": 76.3345, "matched_fragments": 144, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Nitrospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.38", "min_intra_species_ani": "95.62", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000333275.1", "gtdb_species": "s__Nitrospirillum sp000333275", "ani": 76.2671, "matched_fragments": 114, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Nitrospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002401545.1", "gtdb_species": "s__Paremcibacter sp002401545", "ani": 76.2618, "matched_fragments": 89, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Paremcibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002749135.1", "gtdb_species": "s__Paremcibacter sp002749135", "ani": 76.2221, "matched_fragments": 123, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__Paremcibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014205765.1", "gtdb_species": "s__Nitrospirillum iridis", "ani": 76.1877, "matched_fragments": 131, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Nitrospirillum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003337565.1", "gtdb_species": "s__Paracoccus lutimaris", "ani": 76.0035, "matched_fragments": 61, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017744315.1", "gtdb_species": "s__Croceibacterium sp017744315", "ani": 75.9651, "matched_fragments": 51, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Croceibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016595235.1", "gtdb_species": "s__Nordella sp016595235", "ani": 75.8498, "matched_fragments": 74, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aestuariivirgaceae;g__Nordella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003576705.1", "gtdb_species": "s__SYSU-D60015 sp003576705", "ani": 75.8301, "matched_fragments": 109, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Ferrovibrionales;f__Ferrovibrionaceae;g__SYSU-D60015", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008012315.1", "gtdb_species": "s__SSEL01 sp008012315", "ani": 75.672, "matched_fragments": 93, "total_fragments": 1309, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Dongiales;f__Dongiaceae;g__SSEL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }