{ "type": "genome", "identifier": "GCF_006386545.1", "organism": "Methylibium rhizosphaerae", "title": "Methylibium rhizosphaerae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan", "publication": [ {} ], "properties": { "assembly_accession": "GCF_006386545.1", "bioproject": "PRJNA224116", "biosample": "SAMN11415808", "wgs_master": "SWAR00000000.1", "refseq_category": "reference genome", "taxid": "2570323", "species_taxid": "2570323", "organism_name": "Methylibium rhizosphaerae", "infraspecific_name": "strain=C1-9", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/24", "asm_name": "ASM638654v1", "asm_submitter": "State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan", "gbrs_paired_asm": "GCA_006386545.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/386/545/GCF_006386545.1_ASM638654v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6173731", "genome_size_ungapped": "6173731", "gc_percent": "68.500000", "replicon_count": "0", "scaffold_count": "208", "contig_count": "208", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_006386545.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "5657", "protein_coding_gene_count": "5513", "non_coding_gene_count": "58", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-24", "dateModified": "2019-06-24", "datePublished": "2019-06-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Methylibium rhizosphaerae" ], "sample_taxid": [ "2570323" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus natans", "strain": "strain=ATCC 13338", "accession": "GCA_900156335.1", "taxid": 34103, "species_taxid": 34103, "relation_to_type": "type", "validated": true, "ani": 80.2049, "matched_fragments": 746, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000420125.1", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 80.1839, "matched_fragments": 731, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella dechloratans", "strain": "strain=CCUG 30977", "accession": "GCA_021049305.1", "taxid": 36863, "species_taxid": 36863, "relation_to_type": "type", "validated": true, "ani": 80.1042, "matched_fragments": 678, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { 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"strain": "strain=BA0156", "accession": "GCA_011388215.1", "taxid": 2716225, "species_taxid": 2716225, "relation_to_type": "type", "validated": true, "ani": 79.9099, "matched_fragments": 673, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_004340905.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 79.8687, "matched_fragments": 794, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mitsuaria chitinivorans", "strain": "strain=HWN-4", "accession": "GCA_002761755.1", "taxid": 2917965, "species_taxid": 2917965, "relation_to_type": "type", "validated": true, "ani": 79.858, "matched_fragments": 754, "total_fragments": 1970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azohydromonas lata", "strain": "strain=NBRC 102462", "accession": 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