{ "type": "genome", "identifier": "GCF_006475605.1", "organism": "Asticcacaulis tiandongensis", "title": "Asticcacaulis tiandongensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan", "publication": [ {} ], "properties": { "assembly_accession": "GCF_006475605.1", "bioproject": "PRJNA224116", "biosample": "SAMN11356879", "wgs_master": "SSBC00000000.1", "refseq_category": "reference genome", "taxid": "2565365", "species_taxid": "2565365", "organism_name": "Asticcacaulis tiandongensis", "infraspecific_name": "strain=3.1105", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/24", "asm_name": "ASM647560v1", "asm_submitter": "State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan", "gbrs_paired_asm": "GCA_006475605.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/475/605/GCF_006475605.1_ASM647560v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3219428", "genome_size_ungapped": "3219144", "gc_percent": "56.500000", "replicon_count": "0", "scaffold_count": "22", "contig_count": "25", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_006475605.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "2958", "protein_coding_gene_count": "2883", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-24", "dateModified": "2019-06-24", "datePublished": "2019-06-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Asticcacaulis tiandongensis" ], "sample_taxid": [ "2565365" ], "sample_host_organism": [], 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{ "organism_name": "Roseibium suaedae", "strain": "strain=DSM 22153", "accession": "GCA_900142725.1", "taxid": 735517, "species_taxid": 735517, "relation_to_type": "type", "validated": true, "ani": 75.9458, "matched_fragments": 52, "total_fragments": 1064, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_006475605.1", "gtdb_species": "s__Asticcacaulis tiandongensis", "ani": 100.0, "matched_fragments": 1063, "total_fragments": 1064, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Asticcacaulis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003966695.1", "gtdb_species": "s__Asticcacaulis excentricus_A", 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