{ "type": "genome", "identifier": "GCF_006494415.1", "organism": "Pantoea deleyi", "title": "Pantoea deleyi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ottawa Research and Development Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_006494415.1", "bioproject": "PRJNA224116", "biosample": "SAMN12097162", "wgs_master": "VHJA00000000.1", "refseq_category": "na", "taxid": "470932", "species_taxid": "470932", "organism_name": "Pantoea deleyi", "infraspecific_name": "strain=LMG 24200", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/26", "asm_name": "ASM649441v1", "asm_submitter": "Ottawa Research and Development Center", "gbrs_paired_asm": "GCA_006494415.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/494/415/GCF_006494415.1_ASM649441v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4660432", "genome_size_ungapped": "4660432", "gc_percent": "58.000000", "replicon_count": "0", "scaffold_count": "86", "contig_count": "86", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_006494415.1-RS_2024_04_23", "annotation_date": "2024-04-23", "total_gene_count": "4378", "protein_coding_gene_count": "4197", "non_coding_gene_count": "117", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-26", "dateModified": "2019-06-26", "datePublished": "2019-06-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Pantoea deleyi" ], "sample_taxid": [ "470932" ], "sample_host_organism": [ "Eucalyptus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Uganda" ], 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"strain=NBRC 102470", "accession": "GCA_001598475.1", "taxid": 549, "species_taxid": 549, "relation_to_type": "suspected-type", "validated": true, "ani": 88.5203, "matched_fragments": 1245, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pantoea eucalypti", "strain": "strain=LMG 24197", "accession": "GCA_009646115.1", "taxid": 470933, "species_taxid": 470933, "relation_to_type": "type", "validated": true, "ani": 87.4897, "matched_fragments": 1269, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pantoea conspicua", "strain": "strain=LMG 24534", "accession": "GCA_002095315.1", "taxid": 472705, "species_taxid": 472705, "relation_to_type": "type", "validated": true, "ani": 85.4929, "matched_fragments": 1066, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pantoea stewartii subsp. indologenes", "strain": "strain=LMG 2632", "accession": "GCA_000757405.2", "taxid": 66270, "species_taxid": 66269, "relation_to_type": "type", "validated": true, "ani": 81.0783, "matched_fragments": 850, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erwinia aphidicola", "strain": "strain=X001", "accession": "GCA_024169515.1", "taxid": 68334, "species_taxid": 68334, "relation_to_type": "type", "validated": true, "ani": 79.9349, "matched_fragments": 779, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Erwinia phyllosphaerae", "strain": "strain=CMYE1", "accession": "GCA_019132875.1", "taxid": 2853256, "species_taxid": 2853256, "relation_to_type": "type", "validated": true, "ani": 79.2868, "matched_fragments": 642, "total_fragments": 1509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Serratia nevei", "strain": "strain=S15", "accession": "GCA_008364245.1", "taxid": 2703794, "species_taxid": 2703794, "relation_to_type": 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