{ "type": "genome", "identifier": "GCF_006494815.1", "organism": "Nocardioides sambongensis", "title": "Nocardioides sambongensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyungpook National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_006494815.1", "bioproject": "PRJNA224116", "biosample": "SAMN12044225", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2589074", "species_taxid": "2589074", "organism_name": "Nocardioides sambongensis", "infraspecific_name": "strain=KUDC 5002", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/25", "asm_name": "ASM649481v1", "asm_submitter": "Kyungpook National University", "gbrs_paired_asm": "GCA_006494815.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/494/815/GCF_006494815.1_ASM649481v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4434294", "genome_size_ungapped": "4434294", "gc_percent": "71.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_006494815.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "4366", "protein_coding_gene_count": "4092", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-25", "dateModified": "2019-06-25", "datePublished": "2019-06-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardioides sambongensis" ], "sample_taxid": [ "2589074" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Dokdo" ], "sample_host_location_id": [], "data_size": "1.172 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4434294", "Number of Sequences": "1", "Longest Sequences (bp)": "4434294", "N50 (bp)": "4434294", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.7", "Number of CDSs": "4348", "Average Protein Length": "310.8", "Coding Ratio (%)": "91.4", "Number of rRNAs": "9", "Number of tRNAs": "51", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Nocardioides sambongensis", "strain": "strain=KUDC 5002", "accession": "GCA_006494815.1", "taxid": 2589074, "species_taxid": 2589074, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1478, "total_fragments": 1478, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Nocardioides humi", "strain": "strain=DCY24", "accession": "GCA_006494775.1", "taxid": 449461, "species_taxid": 449461, "relation_to_type": "type", "validated": true, "ani": 81.4675, "matched_fragments": 872, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides aromaticivorans", "strain": "strain=DSM 15131", "accession": "GCA_013408525.1", "taxid": 200618, "species_taxid": 200618, "relation_to_type": "type", "validated": true, "ani": 81.3948, "matched_fragments": 822, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides kongjuensis", "strain": "strain=DSM 19082", "accession": "GCA_013409625.1", "taxid": 349522, "species_taxid": 349522, "relation_to_type": "type", "validated": true, "ani": 81.361, "matched_fragments": 853, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides albidus", "strain": "strain=CCTCC AB 2015297", "accession": "GCA_006335005.1", "taxid": 1517589, "species_taxid": 1517589, "relation_to_type": "type", "validated": true, "ani": 81.2921, "matched_fragments": 778, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides carbamazepini", "strain": "strain=CBZ_1", "accession": "GCA_024614185.1", "taxid": 2854259, "species_taxid": 2854259, "relation_to_type": "type", "validated": true, "ani": 81.1237, "matched_fragments": 833, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides caeni", "strain": "strain=DSM 23134", "accession": "GCA_004912195.1", "taxid": 574700, "species_taxid": 574700, "relation_to_type": "type", "validated": true, "ani": 81.0651, "matched_fragments": 773, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides antri", "strain": "strain=BN140041", "accession": "GCA_008373765.1", "taxid": 2607659, "species_taxid": 2607659, "relation_to_type": "type", "validated": true, "ani": 81.0627, "matched_fragments": 717, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides stalactiti", "strain": "strain=1.0914", "accession": "GCA_014180715.1", "taxid": 2755356, "species_taxid": 2755356, "relation_to_type": "type", "validated": true, "ani": 80.8109, "matched_fragments": 689, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides immobilis", "strain": "strain=CCTCC AB 2017083", "accession": "GCA_003515065.1", "taxid": 2049295, "species_taxid": 2049295, "relation_to_type": "type", "validated": true, "ani": 80.5922, "matched_fragments": 797, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides humilatus", "strain": "strain=BN130099", "accession": "GCA_008373755.1", "taxid": 2607660, "species_taxid": 2607660, "relation_to_type": "type", "validated": true, "ani": 80.4425, "matched_fragments": 698, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides deserti", "strain": "strain=CGMCC 4.7183", "accession": "GCA_014646035.1", "taxid": 1588644, "species_taxid": 1588644, "relation_to_type": "type", "validated": true, "ani": 80.3707, "matched_fragments": 683, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides deserti", "strain": "strain=SC8A-24", "accession": "GCA_014266025.1", "taxid": 1588644, "species_taxid": 1588644, "relation_to_type": "type", "validated": true, "ani": 80.2952, "matched_fragments": 688, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides panaciterrulae", "strain": "strain=DSM 21350", "accession": "GCA_013409645.1", "taxid": 661492, "species_taxid": 661492, "relation_to_type": "type", "validated": true, "ani": 80.261, "matched_fragments": 670, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides marinus", "strain": "strain=DSM 18248", "accession": "GCA_013408145.1", "taxid": 374514, "species_taxid": 374514, "relation_to_type": "type", "validated": true, "ani": 80.2441, "matched_fragments": 678, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ferulae", "strain": "strain=SZ4R5S7", "accession": "GCA_003660455.1", "taxid": 2340821, "species_taxid": 2340821, "relation_to_type": "type", "validated": true, "ani": 80.1947, "matched_fragments": 724, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides donggukensis", "strain": "strain=MJB4", "accession": "GCA_014842875.1", "taxid": 2774019, "species_taxid": 2774019, "relation_to_type": "type", "validated": true, "ani": 79.8841, "matched_fragments": 580, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides solisilvae", "strain": "strain=Ka25", "accession": "GCA_003194625.1", "taxid": 1542435, "species_taxid": 1542435, "relation_to_type": "type", "validated": true, "ani": 79.7559, "matched_fragments": 609, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides daphniae", "strain": "strain=CCM 7403", "accession": "GCA_014635145.1", "taxid": 402297, "species_taxid": 402297, "relation_to_type": "type", "validated": true, "ani": 79.71, "matched_fragments": 532, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marmoricola solisilvae", "strain": "strain=KIS18-7", "accession": "GCA_003725775.1", "taxid": 1542737, "species_taxid": 1542737, "relation_to_type": "type", "validated": true, "ani": 79.6862, "matched_fragments": 543, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides gansuensis", "strain": "strain=WSJ-1", "accession": "GCA_003076135.1", "taxid": 2138300, "species_taxid": 2138300, "relation_to_type": "type", "validated": true, "ani": 79.678, "matched_fragments": 615, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 79.6303, "matched_fragments": 675, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides halotolerans", "strain": "strain=DSM 19273", "accession": "GCA_000422805.1", "taxid": 433660, "species_taxid": 433660, "relation_to_type": "type", "validated": true, "ani": 79.5598, "matched_fragments": 657, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides flavescens", "strain": "strain=YIM 123512", "accession": "GCA_009823805.1", "taxid": 2691959, "species_taxid": 2691959, "relation_to_type": "type", "validated": true, "ani": 79.5279, "matched_fragments": 655, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides acrostichi", "strain": "strain=CBS4Y-1", "accession": "GCA_015319165.1", "taxid": 2784339, "species_taxid": 2784339, "relation_to_type": "type", "validated": true, "ani": 79.4757, "matched_fragments": 612, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides malaquae", "strain": "strain=Y6", "accession": "GCA_015070385.1", "taxid": 2773426, "species_taxid": 2773426, "relation_to_type": "type", "validated": true, "ani": 79.4648, "matched_fragments": 500, "total_fragments": 1478, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_006494815.1", "gtdb_species": "s__Nocardioides sambongensis", "ani": 100.0, "matched_fragments": 1478, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_008123405.1", "gtdb_species": "s__Nocardioides sp008123405", "ani": 86.4069, "matched_fragments": 1113, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004919105.1", "gtdb_species": "s__Nocardioides sp004919105", "ani": 83.2166, "matched_fragments": 883, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018388425.1", "gtdb_species": "s__Nocardioides sp018388425", "ani": 81.8055, "matched_fragments": 764, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.59", "min_intra_species_ani": "99.18", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.96", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_018831735.1", "gtdb_species": "s__Nocardioides sp018831735", "ani": 81.3317, "matched_fragments": 844, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900114845.1", "gtdb_species": "s__Nocardioides simplex", "ani": 81.3096, "matched_fragments": 856, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.16", "min_intra_species_ani": "97.49", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_006335005.1", "gtdb_species": "s__Nocardioides albidus", "ani": 81.2661, "matched_fragments": 781, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009780515.1", "gtdb_species": "s__Nocardioides sp009780515", "ani": 81.1204, "matched_fragments": 637, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.88", "min_intra_species_ani": "99.88", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008373765.1", "gtdb_species": "s__Nocardioides antri", "ani": 81.0615, "matched_fragments": 717, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004803405.1", "gtdb_species": "s__Nocardioides sp004803405", "ani": 80.9342, "matched_fragments": 686, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001428565.1", "gtdb_species": "s__Nocardioides sp001428565", "ani": 80.8692, "matched_fragments": 785, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014180715.1", "gtdb_species": "s__Nocardioides stalactiti", "ani": 80.827, "matched_fragments": 688, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011250565.1", "gtdb_species": "s__Nocardioides sp011250565", "ani": 80.3423, "matched_fragments": 687, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014108865.1", "gtdb_species": "s__Nocardioides sp014108865", "ani": 80.3222, "matched_fragments": 717, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014266025.1", "gtdb_species": "s__Nocardioides deserti", "ani": 80.3108, "matched_fragments": 686, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_016924665.1", "gtdb_species": "s__Nocardioides sp016924665", "ani": 80.281, "matched_fragments": 707, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013409645.1", "gtdb_species": "s__Nocardioides panaciterrulae", "ani": 80.2135, "matched_fragments": 682, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003076135.1", "gtdb_species": "s__Nocardioides gansuensis", "ani": 79.7122, "matched_fragments": 610, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003725775.1", "gtdb_species": "s__Marmoricola solisilvae", "ani": 79.6865, "matched_fragments": 543, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016827675.1", "gtdb_species": "s__Nocardioides sp016827675", "ani": 79.5692, "matched_fragments": 520, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009823805.1", "gtdb_species": "s__Nocardioides sp009823805", "ani": 79.5398, "matched_fragments": 654, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015319165.1", "gtdb_species": "s__Nocardioides acrostichi", "ani": 79.4434, "matched_fragments": 616, "total_fragments": 1478, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.295, "cell_length": 0.117, "doubling_h": null, "growth_tmp": 27.661, "optimum_tmp": 28.172, "optimum_ph": 7.323, "genome_size": 4214904.166, "gc_content": 71.317, "coding_genes": 4058.0, "rRNA16S_genes": 3.0, "tRNA_genes": 48.0, "gram_stain": 1.0, "sporulation": 0.023, "motility": 0.217, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 0.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 1.0, "bacillus_cell_shape": 0.893, "coccus_cell_shape": 0.021, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.085, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Nocardioides", "sambongensis" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }