{
    "type": "genome",
    "identifier": "GCF_006538705.1",
    "organism": "Cellulomonas uda",
    "title": "Cellulomonas uda",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "National Institute of Technology and Evaluation",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_006538705.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00093690",
        "wgs_master": "BJLP00000000.1",
        "refseq_category": "na",
        "taxid": "1714",
        "species_taxid": "1714",
        "organism_name": "Cellulomonas uda",
        "infraspecific_name": "strain=NBRC 3747",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/06/12",
        "asm_name": "ASM653870v1",
        "asm_submitter": "National Institute of Technology and Evaluation",
        "gbrs_paired_asm": "GCA_006538705.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/538/705/GCF_006538705.1_ASM653870v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3563272",
        "genome_size_ungapped": "3563272",
        "gc_percent": "74.000000",
        "replicon_count": "0",
        "scaffold_count": "103",
        "contig_count": "103",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_006538705.1-RS_2024_08_26",
        "annotation_date": "2024-08-26",
        "total_gene_count": "3290",
        "protein_coding_gene_count": "3186",
        "non_coding_gene_count": "52",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-06-12",
    "dateModified": "2019-06-12",
    "datePublished": "2019-06-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cellulomonas uda"
        ],
        "sample_taxid": [
            "1714"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA:Virginia, Arlington"
        ],
        "sample_host_location_id": [],
        "data_size": "0.931 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3563272",
        "Number of Sequences": "103",
        "Longest Sequences (bp)": "148400",
        "N50 (bp)": "57999",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "73.9",
        "Number of CDSs": "3193",
        "Average Protein Length": "331.9",
        "Coding Ratio (%)": "89.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Cellulomonas palmilytica",
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                "status": "below_threshold"
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            {
                "organism_name": "Cellulomonas persica",
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                "species_taxid": 76861,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gelida",
                "strain": "strain=JCM 1490",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gilvus",
                "strain": "strain=ATCC 13127",
                "accession": "GCA_000218545.1",
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                "status": "below_threshold"
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            {
                "organism_name": "Cellulomonas fulva",
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas avistercoris",
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                "accession": "GCA_014836445.1",
                "taxid": 2762242,
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                "matched_fragments": 699,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas xylanilytica",
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                "status": "below_threshold"
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            {
                "organism_name": "Actinotalea solisilvae",
                "strain": "strain=KACC 19191",
                "accession": "GCA_016464425.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oerskovia rustica",
                "strain": "strain=Sa4CUA1",
                "accession": "GCA_014836555.1",
                "taxid": 2762237,
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                "relation_to_type": "type",
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            }
        ],
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                "accession": "GCF_006538705.1",
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    "_bac2feature": {
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}