{
    "type": "genome",
    "identifier": "GCF_006539465.1",
    "organism": "Corynebacterium flavescens",
    "title": "Corynebacterium flavescens",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "National Institute of Technology and Evaluation",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_006539465.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00097245",
        "wgs_master": "BJNB00000000.1",
        "refseq_category": "na",
        "taxid": "28028",
        "species_taxid": "28028",
        "organism_name": "Corynebacterium flavescens",
        "infraspecific_name": "strain=NBRC 14136",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/06/12",
        "asm_name": "ASM653946v1",
        "asm_submitter": "National Institute of Technology and Evaluation",
        "gbrs_paired_asm": "GCA_006539465.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/539/465/GCF_006539465.1_ASM653946v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2643964",
        "genome_size_ungapped": "2643964",
        "gc_percent": "60.000000",
        "replicon_count": "0",
        "scaffold_count": "90",
        "contig_count": "90",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_006539465.1-RS_2024_09_09",
        "annotation_date": "2024-09-09",
        "total_gene_count": "2472",
        "protein_coding_gene_count": "2376",
        "non_coding_gene_count": "58",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-06-12",
    "dateModified": "2019-06-12",
    "datePublished": "2019-06-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Corynebacterium flavescens"
        ],
        "sample_taxid": [
            "28028"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.756 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.54,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2643964",
        "Number of Sequences": "90",
        "Longest Sequences (bp)": "224529",
        "N50 (bp)": "50802",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.0",
        "Number of CDSs": "2429",
        "Average Protein Length": "322.4",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Corynebacterium flavescens",
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                "accession": "GCA_006539465.1",
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                "species_taxid": 28028,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "status": "conclusive"
            },
            {
                "organism_name": "Corynebacterium flavescens",
                "strain": "strain=CCUG 28791T",
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                "ani": 99.9996,
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                "status": "conclusive"
            },
            {
                "organism_name": "Corynebacterium flavescens",
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                "relation_to_type": "type",
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            },
            {
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                "accession": "GCA_006538485.1",
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                "species_taxid": 43770,
                "relation_to_type": "type",
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                "ani": 78.839,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium striatum",
                "strain": "strain=FDAARGOS_1054",
                "accession": "GCA_016403285.1",
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                "relation_to_type": "type",
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                "total_fragments": 841,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium aurimucosum",
                "strain": "strain=FDAARGOS_1109",
                "accession": "GCA_016728705.1",
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                "species_taxid": 169292,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium aurimucosum",
                "strain": "strain=DSM 44532",
                "accession": "GCA_024138775.1",
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                "species_taxid": 169292,
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                "ani": 78.4847,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium phoceense",
                "strain": "strain=MC1",
                "accession": "GCA_900092335.1",
                "taxid": 1686286,
                "species_taxid": 1686286,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Corynebacterium lizhenjunii",
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                "taxid": 2709394,
                "species_taxid": 2709394,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0398,
                "matched_fragments": 174,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium",
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                "ani_circumscription_radius": 95.1108,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            {
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}