{ "type": "genome", "identifier": "GCF_006539665.1", "organism": "Bradyrhizobium elkanii", "title": "Bradyrhizobium elkanii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_006539665.1", "bioproject": "PRJNA224116", "biosample": "SAMD00097547", "wgs_master": "BJNL00000000.1", "refseq_category": "na", "taxid": "29448", "species_taxid": "29448", "organism_name": "Bradyrhizobium elkanii", "infraspecific_name": "strain=NBRC 14791", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/06/12", "asm_name": "ASM653966v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_006539665.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/539/665/GCF_006539665.1_ASM653966v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9260234", "genome_size_ungapped": "9260234", "gc_percent": "63.500000", "replicon_count": "0", "scaffold_count": "289", "contig_count": "289", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_006539665.1-RS_2024_09_09", "annotation_date": "2024-09-09", "total_gene_count": "8898", "protein_coding_gene_count": "8571", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-06-12", "dateModified": "2019-06-12", "datePublished": "2019-06-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Bradyrhizobium elkanii" ], "sample_taxid": [ "29448" ], "sample_host_organism": [ "Glycine max" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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{ "organism_name": "Bradyrhizobium quebecense", "strain": "strain=66S1MB, /ecotype=symbiovar septentrionalis", "accession": "GCA_013373795.3", "taxid": 2748629, "species_taxid": 2748629, "relation_to_type": "type", "validated": true, "ani": 90.7438, "matched_fragments": 2163, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium altum", "strain": "strain=Pear77", "accession": "GCA_020889705.1", "taxid": 1571202, "species_taxid": 1571202, "relation_to_type": "type", "validated": true, "ani": 90.6441, "matched_fragments": 1998, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium oropedii", "strain": "strain=Pear76", "accession": "GCA_020889685.1", "taxid": 1571201, "species_taxid": 1571201, "relation_to_type": "type", "validated": true, "ani": 90.6258, "matched_fragments": 1985, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium acaciae", "strain": "strain=10BB", "accession": "GCA_020889785.1", "taxid": 2683706, "species_taxid": 2683706, "relation_to_type": "type", "validated": true, "ani": 90.5042, "matched_fragments": 2005, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium tropiciagri", "strain": "strain=SEMIA 6148", "accession": "GCA_001189845.1", "taxid": 312253, "species_taxid": 312253, "relation_to_type": "type", "validated": true, "ani": 90.4071, "matched_fragments": 2154, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium uaiense", "strain": "strain=UFLA03-164", "accession": "GCA_010811875.1", "taxid": 2594946, "species_taxid": 2594946, "relation_to_type": "type", "validated": true, "ani": 90.3287, "matched_fragments": 2029, "total_fragments": 2946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium embrapense", 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