{
    "type": "genome",
    "identifier": "GCF_006542335.1",
    "organism": "Neokomagataea tanensis",
    "title": "Neokomagataea tanensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Malaya",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_006542335.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10095080",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "661191",
        "species_taxid": "661191",
        "organism_name": "Neokomagataea tanensis",
        "infraspecific_name": "strain=AH13 = NBRC 106556",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/07/02",
        "asm_name": "ASM654233v1",
        "asm_submitter": "University of Malaya",
        "gbrs_paired_asm": "GCA_006542335.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/542/335/GCF_006542335.1_ASM654233v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2577002",
        "genome_size_ungapped": "2577002",
        "gc_percent": "52.000000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_006542335.1-RS_2024_12_16",
        "annotation_date": "2024-12-16",
        "total_gene_count": "2383",
        "protein_coding_gene_count": "2220",
        "non_coding_gene_count": "90",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-07-02",
    "dateModified": "2019-07-02",
    "datePublished": "2019-07-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Neokomagataea tanensis"
        ],
        "sample_taxid": [
            "661191"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Thailand: Tan Island, Hat Khanom-Mu Ko Thale Tai National Park, Nakhon-Si- Thammarat"
        ],
        "sample_host_location_id": [],
        "data_size": "0.734 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2577002",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "2477279",
        "N50 (bp)": "2477279",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.9",
        "Number of CDSs": "2296",
        "Average Protein Length": "328.2",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "21",
        "Number of tRNAs": "65",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 661191,
                "relation_to_type": "type",
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            },
            {
                "organism_name": "Neokomagataea anthophila",
                "strain": "strain=TBRC 2177",
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                "taxid": 2826925,
                "species_taxid": 2826925,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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                "status": "below_threshold"
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            {
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                "taxid": 1293412,
                "species_taxid": 1293412,
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                "status": "below_threshold"
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                "species_taxid": 376620,
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                "status": "below_threshold"
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            {
                "organism_name": "Gluconobacter morbifer",
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                "accession": "GCA_000234355.2",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Gluconobacter frateurii",
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                "taxid": 38308,
                "species_taxid": 38308,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Gluconobacter cadivus",
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            },
            {
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                "accession": "GCA_007990185.1",
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            },
            {
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                "accession": "GCA_000964465.1",
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        ],
        "cc_result": {
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                "accession": "GCF_006542335.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Neokomagataea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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                "mean_intra_species_ani": "N/A",
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}