# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence001:1..806(+)	internal_stop_codon	846..848(+),804..806(+)		WP_011836579.1	preprotein translocase subunit SecA	95.1	30.4	57.6
MGA_2	LOCUS_00020	sequence001:888..1235(+)	internal_stop_codon	846..848(+),1233..1235(+),804..806(+)		WP_002289770.1	preprotein translocase subunit SecA	100.0	13.6	63.5
MGA_3	LOCUS_00030	sequence001:1332..2081(+)	internal_stop_codon	1233..1235(+),2166..2168(+),2079..2081(+)		WP_000579379.1	preprotein translocase subunit SecA	100.0	29.8	41.7
MGA_6	LOCUS_00050	sequence002:431..757(+)	partial			WP_011166799.1	DUF2714 domain-containing protein	89.8	59.1	35.4
MGA_7	LOCUS_00060	sequence002:757..1365(+)	internal_stop_codon	1363..1365(+)		WP_011166798.1	hypothetical protein	99.0	68.3	43.5
MGA_11	LOCUS_00080	sequence003:264..2414(-)	internal_stop_codon	264..266(-)		WP_011166855.1	DNA polymerase III subunit alpha	97.8	72.3	36.5
MGA_12	LOCUS_00090	sequence004:1010..1423(+)	internal_stop_codon	1421..1423(+)		WP_002357094.1	phosphoglycerate kinase	99.3	34.3	62.5
MGA_13	LOCUS_00100	sequence004:1535..1954(+)	internal_stop_codon	1952..1954(+),1421..1423(+)		WP_003700618.1	phosphoglycerate kinase	100.0	35.0	55.7
MGA_14	LOCUS_00110	sequence004:1964..2197(+)	internal_stop_codon	1952..1954(+)		WP_001074749.1	phosphoglycerate kinase	98.7	19.2	63.2
MGA_27	LOCUS_00200	sequence008:488..742(+)	internal_stop_codon	461..463(+),269..271(+),740..742(+),890..892(+)		WP_012048370.1	glycine--tRNA ligase	94.0	17.1	82.3
MGA_28	LOCUS_00210	sequence008:1043..1291(+)	internal_stop_codon	1289..1291(+),890..892(+)		WP_011166648.1	glycine--tRNA ligase	98.8	17.5	54.3
MGA_31	LOCUS_00230	sequence009:1193..1696(-)	partial			WP_000455839.1	MurR/RpiR family transcriptional regulator	97.0	52.0	27.4
MGA_37	LOCUS_00280	sequence010:1886..2284(+)	partial			WP_010922714.1	M protein	90.9	26.2	25.2
MGA_38	LOCUS_00290	sequence011:138..518(+)	internal_stop_codon	759..761(+)		WP_020862982.1	PTS transporter subunit EIIC	73.0	12.3	46.7
MGA_39	LOCUS_00300	sequence011:1260..1544(+)	internal_stop_codon	1542..1544(+),1026..1028(+),1752..1754(+)		WP_020862982.1	PTS transporter subunit EIIC	93.6	11.8	54.5
MGA_40	LOCUS_00310	sequence011:1560..1754(+)	internal_stop_codon	1542..1544(+),1752..1754(+)		WP_011166265.1	PTS transporter subunit EIIC	93.8	10.3	43.3
MGA_41	LOCUS_00320	sequence011:2094..2801(+)	partial			WP_011987039.1	glucose PTS transporter subunit IIA	73.2	25.5	40.6
MGA_42	LOCUS_00330	sequence011:2855..3508(-)	partial			WP_004083002.1	ABC transporter ATP-binding protein	97.2	35.3	54.0
MGA_44	LOCUS_00350	sequence011:3926..4291(-)	partial			WP_011836926.1	ABC transporter ATP-binding protein	100.0	20.4	23.1
MGA_47	LOCUS_00380	sequence011:4837..5637(-)	internal_stop_codon	4837..4839(-),5863..5865(-)		WP_010966556.1	ABC transporter ATP-binding protein	99.2	45.0	43.8
MGA_50	LOCUS_00410	sequence011:7414..8133(+)	internal_stop_codon	7273..7275(+)		WP_001038010.1	tRNA 2-thiouridine(34) synthase MnmA	99.6	65.5	51.2
MGA_51	LOCUS_00420	sequence011:8273..8545(+)	internal_stop_codon	8249..8251(+),8729..8731(+),8603..8605(+),8168..8170(+),8543..8545(+)		WP_011166380.1	alanine--tRNA ligase	98.9	10.2	68.1
MGA_52	LOCUS_00430	sequence011:8837..10753(+)	internal_stop_codon	8729..8731(+),8603..8605(+)		WP_011166380.1	alanine--tRNA ligase	97.5	72.7	34.3
MGA_54	LOCUS_00450	sequence012:274..462(-)	internal_stop_codon	274..276(-),583..585(-)		WP_002680838.1	prolyl aminopeptidase	95.2	18.8	49.2
MGA_56	LOCUS_00470	sequence012:853..1182(-)	internal_stop_codon	583..585(-),853..855(-)		WP_002225339.1	prolyl aminopeptidase	88.1	31.0	50.0
MGA_57	LOCUS_00480	sequence012:1166..1744(-)	internal_stop_codon	1781..1783(-)		WP_000411056.1	Xaa-Pro dipeptidase	96.4	51.8	51.6
MGA_60	LOCUS_00510	sequence013:404..817(+)	internal_stop_codon	1040..1042(+),815..817(+),389..391(+)		WP_000762229.1	D-lactate dehydrogenase	97.8	39.5	46.3
MGA_61	LOCUS_00520	sequence013:854..1042(+)	internal_stop_codon	1040..1042(+),815..817(+)		WP_011122039.1	2-hydroxyacid dehydrogenase	88.7	16.6	45.5
MGA_68	LOCUS_00570	sequence014:559..2055(-)	internal_stop_codon	2137..2139(-)		WP_011183568.1	ATP-dependent zinc metalloprotease FtsH	99.0	75.4	53.3
MGA_75	LOCUS_00590	sequence016:742..927(-)	frameshift,internal_stop_codon	651..653(-)	1017,969,1125,750	WP_042733551.1	IS3 family transposase	98.4	14.1	46.7
MGA_78	LOCUS_00610	sequence017:874..1140(+)	internal_stop_codon	1138..1140(+),733..735(+),664..666(+)		WP_003243311.1	cardiolipin synthase	97.7	17.8	47.7
MGA_82	LOCUS_00640	sequence018:533..1411(-)	partial			WP_005814402.1	ABC transporter ATP-binding protein	92.8	46.9	39.2
MGA_83	LOCUS_00650	sequence018:1412..>2171(-)	internal_stop_codon	1412..1414(-)		WP_012583011.1	ABC transporter ATP-binding protein	77.8	34.1	23.4
MGA_86	LOCUS_00680	sequence019:549..1247(-)	partial			WP_001304525.1	DUF262 domain-containing protein	80.6	33.5	26.6
MGA_93	LOCUS_00730	sequence021:869..1282(-)	internal_stop_codon	869..871(-),1418..1420(-)		WP_008363296.1	DUF4011 domain-containing protein	94.9	8.3	61.5
MGA_94	LOCUS_00740	sequence021:1418..>2153(-)	internal_stop_codon	1418..1420(-)		WP_008363296.1	DUF4011 domain-containing protein	98.4	15.3	63.3
MGA_104	LOCUS_00830	sequence022:4335..4826(-)	internal_stop_codon	4335..4337(-),4194..4196(-),4125..4127(-)		WP_013390210.1	beta-N-acetylglucosaminidase domain-containing protein	89.6	7.7	33.8
MGA_116	LOCUS_00940	sequence023:608..898(-)	frameshift,internal_stop_codon	608..610(-),965..967(-),962..964(-)	562	WP_011183167.1	sigma-70 family RNA polymerase sigma factor	100.0	19.5	54.2
MGA_117	LOCUS_00950	sequence023:965..1210(-)	internal_stop_codon	1241..1243(-),965..967(-),962..964(-),1229..1231(-)		WP_002985187.1	RNA polymerase sigma factor RpoD	100.0	21.1	54.3
MGA_121	LOCUS_00980	sequence024:764..1021(-)	partial			WP_003547047.1	sugar-phosphatase	84.7	28.1	40.8
MGA_129	LOCUS_01030	sequence026:204..677(+)	internal_stop_codon	675..677(+)		WP_011015666.1	SPFH domain-containing protein	86.0	45.9	53.3
MGA_130	LOCUS_01040	sequence026:741..1136(+)	internal_stop_codon	675..677(+)		WP_004080738.1	SPFH domain-containing protein	100.0	44.3	46.7
MGA_132	LOCUS_01050	sequence027:3..620(+)	internal_stop_codon	618..620(+),663..665(+)		WP_009897920.1	DUF4116 domain-containing protein	94.6	42.2	32.9
MGA_134	LOCUS_01070	sequence027:1011..1370(+)	internal_stop_codon	993..995(+),1368..1370(+)		WP_009897920.1	DUF4116 domain-containing protein	98.3	26.7	33.8
MGA_135	LOCUS_01080	sequence027:1398..1817(+)	internal_stop_codon	1368..1370(+),1815..1817(+)		WP_009897920.1	DUF4116 domain-containing protein	99.3	23.9	33.3
MGA_141	LOCUS_01110	sequence029:562..735(-)	internal_stop_codon	562..564(-),790..792(-),541..543(-),757..759(-)		WP_016361990.1	IS256 family transposase	96.5	13.8	61.8
MGA_142	LOCUS_01120	sequence029:790..1056(-)	internal_stop_codon	1087..1089(-),541..543(-),790..792(-),562..564(-),1057..1059(-),757..759(-),1237..1239(-)		WP_072530700.1	IS256 family transposase	100.0	21.5	53.4
MGA_144	LOCUS_01140	sequence029:1237..1569(-)	frameshift,internal_stop_codon	1056..1058(-),1086..1088(-),1236..1238(-)	1583	WP_002389929.1	IS256 family transposase	100.0	27.6	39.1
MGA_148	LOCUS_01160	sequence030:278..1003(+)	internal_stop_codon	125..127(+)		WP_000760485.1	DNA cytosine methyltransferase	100.0	74.9	33.5
MGA_155	LOCUS_01200	sequence032:426..875(+)	internal_stop_codon	873..875(+)		WP_002363179.1	DNA helicase PcrA	87.9	17.4	46.6
MGA_165	LOCUS_01280	sequence033:4167..4475(+)	internal_stop_codon	4473..4475(+)		WP_011166360.1	30S ribosomal protein S7	98.0	64.5	66.0
MGA_166	LOCUS_01290	sequence033:4479..4634(+)	internal_stop_codon	4473..4475(+)		WP_001137495.1	30S ribosomal protein S7	100.0	32.7	78.4
MGA_167	LOCUS_01300	sequence033:4662..4817(+)	internal_stop_codon	4815..4817(+),5019..5021(+),4875..4877(+)		WP_011166361.1	elongation factor G	100.0	7.4	86.3
MGA_168	LOCUS_01310	sequence033:5337..6185(+)	internal_stop_codon	5151..5153(+),6183..6185(+)		WP_011183519.1	elongation factor G	100.0	40.9	70.0
MGA_169	LOCUS_01320	sequence033:6297..6752(+)	internal_stop_codon	6183..6185(+)		WP_011393940.1	elongation factor G	94.7	20.5	64.3
MGA_175	LOCUS_01380	sequence033:9296..10096(+)	internal_stop_codon	10168..10170(+),10315..10317(+),10138..10140(+),10282..10284(+)		WP_011183049.1	energy-coupling factor transporter ATPase	99.6	66.0	54.3
MGA_176	LOCUS_01390	sequence033:10348..10965(+)	internal_stop_codon	10168..10170(+),10315..10317(+),10138..10140(+),10282..10284(+)		WP_002288722.1	energy-coupling factor ABC transporter ATP-binding protein	97.6	69.9	52.0
MGA_187	LOCUS_01440	sequence037:363..620(-)	internal_stop_codon	801..803(-),714..716(-)		WP_011166335.1	glutamate--tRNA ligase	85.9	14.9	50.7
MGA_189	LOCUS_01460	sequence037:912..1172(-)	internal_stop_codon	1215..1217(-),1362..1364(-),801..803(-),1269..1271(-),912..914(-)		WP_000031057.1	glutamate--tRNA ligase	100.0	17.9	65.5
MGA_190	LOCUS_01470	sequence037:1578..1766(-)	internal_stop_codon	1578..1580(-),1491..1493(-)		WP_010875035.1	glutamate--tRNA ligase	96.8	12.4	78.3
MGA_191	LOCUS_01480	sequence038:157..834(+)	internal_stop_codon	832..834(+)		WP_011387230.1	putative immunoglobulin-blocking virulence protein	97.8	27.7	29.1
MGA_199	LOCUS_01530	sequence041:451..1467(-)	internal_stop_codon	1501..1503(-)		WP_011166796.1	hypothetical protein	97.3	40.4	27.9
MGA_201	LOCUS_01550	sequence042:768..1547(-)	partial			WP_003230010.1	molecular chaperone DnaJ	97.3	65.1	40.9
MGA_205	LOCUS_01580	sequence044:113..298(+)	internal_stop_codon	296..298(+)		WP_003700615.1	phosphopyruvate hydratase	86.9	12.0	75.5
MGA_206	LOCUS_01590	sequence044:317..1066(+)	internal_stop_codon	1064..1066(+),296..298(+)		WP_003643976.1	phosphopyruvate hydratase	99.2	52.3	54.3
MGA_207	LOCUS_01600	sequence044:1094..1471(+)	internal_stop_codon	1064..1066(+)		WP_002985288.1	phosphopyruvate hydratase	100.0	28.7	75.2
MGA_208	LOCUS_01610	sequence044:2076..2579(+)	partial			WP_011166549.1	phosphatidate cytidylyltransferase	74.9	37.5	43.0
MGA_211	LOCUS_01640	sequence044:3493..4515(+)	internal_stop_codon	4513..4515(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	23.4	33.0
MGA_212	LOCUS_01650	sequence044:4714..5202(+)	internal_stop_codon	5428..5430(+),4513..4515(+),5200..5202(+)		WP_011166548.1	PolC-type DNA polymerase III	100.0	10.9	42.6
MGA_213	LOCUS_01660	sequence044:5431..5820(+)	internal_stop_codon	5428..5430(+),5818..5820(+),5200..5202(+)		WP_031296849.1	PolC-type DNA polymerase III	98.4	7.8	59.1
MGA_214	LOCUS_01670	sequence044:5908..6363(+)	internal_stop_codon	5818..5820(+),6448..6450(+),6361..6363(+),6436..6438(+)		WP_011183185.1	PolC-type DNA polymerase III	100.0	10.0	55.6
MGA_216	LOCUS_01690	sequence044:7075..7227(+)	internal_stop_codon	7225..7227(+),7426..7428(+)		WP_003233007.1	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU	100.0	17.8	52.0
MGA_218	LOCUS_01710	sequence044:7657..7887(+)	partial			WP_000766420.1	Cof-type HAD-IIB family hydrolase	86.8	22.4	45.5
MGA_220	LOCUS_01730	sequence044:8717..9601(+)	internal_stop_codon	9599..9601(+)		WP_003245789.1	recombinase RecA	94.2	79.6	63.9
MGA_221	LOCUS_01740	sequence044:9862..10092(+)	internal_stop_codon	10090..10092(+),10258..10260(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	90.8	26.6	52.2
MGA_228	LOCUS_01780	sequence046:513..1070(+)	internal_stop_codon	495..497(+)		WP_011166502.1	ribulose-phosphate 3-epimerase	90.3	76.0	40.2
MGA_231	LOCUS_01800	sequence047:106..948(+)	internal_stop_codon	946..948(+)		WP_000170458.1	CTP synthase	91.8	48.2	47.7
MGA_233	LOCUS_01810	sequence048:609..1091(-)	partial			WP_013390019.1	restriction endonuclease subunit S	52.5	21.1	42.5
MGA_237	LOCUS_01830	sequence050:504..749(-)	internal_stop_codon	852..854(-),870..872(-),807..809(-),504..506(-)		WP_005793720.1	proline--tRNA ligase	100.0	16.3	54.3
MGA_238	LOCUS_01840	sequence050:870..1136(-)	internal_stop_codon	852..854(-),1230..1232(-),870..872(-),807..809(-),1140..1142(-)		WP_011166523.1	proline--tRNA ligase	100.0	18.6	67.0
MGA_242	LOCUS_01860	sequence051:960..1394(+)	internal_stop_codon	927..929(+)		WP_003416006.1	hypoxanthine phosphoribosyltransferase	97.2	80.0	50.0
MGA_251	LOCUS_01910	sequence055:220..666(-)	partial			WP_002661849.1	sugar ABC transporter ATP-binding protein	77.7	24.9	36.4
MGA_255	LOCUS_01950	sequence055:2241..2573(-)	internal_stop_codon	2241..2243(-)		WP_010871101.1	LemA family protein	98.2	56.6	41.7
MGA_261	LOCUS_02010	sequence055:5743..6384(-)	internal_stop_codon	5743..5745(-),6385..6387(-)		WP_011167040.1	F0F1 ATP synthase subunit alpha	99.5	40.4	67.9
MGA_262	LOCUS_02020	sequence055:6385..7131(-)	internal_stop_codon	6385..6387(-)		WP_011183010.1	F0F1 ATP synthase subunit alpha	100.0	47.2	60.1
MGA_265	LOCUS_02050	sequence055:8276..8575(-)	partial			WP_003421370.1	ATP synthase F0 subunit C	45.5	52.3	62.2
MGA_266	LOCUS_02060	sequence055:8831..9187(-)	frameshift,internal_stop_codon	8690..8692(-),8831..8833(-)	8665	WP_011167044.1	F0F1 ATP synthase subunit A	82.2	34.1	33.7
MGA_272	LOCUS_02110	sequence057:541..1140(-)	partial			WP_010874575.1	ATP-binding cassette domain-containing protein	92.5	21.6	50.0
MGA_288	LOCUS_02180	sequence064:1..866(+)	partial			WP_138431871.1	AAA family ATPase	92.0	51.1	46.2
MGA_295	LOCUS_02230	sequence066:316..1473(-)	internal_stop_codon	316..318(-),1537..1539(-)		WP_011166465.1	dihydrolipoyl dehydrogenase	99.5	66.1	41.0
MGA_296	LOCUS_02240	sequence066:1537..2118(-)	internal_stop_codon	1537..1539(-)		WP_011182939.1	dihydrolipoyl dehydrogenase	100.0	28.1	41.5
MGA_297	LOCUS_02250	sequence066:2201..2551(-)	internal_stop_codon	2201..2203(-),2699..2701(-)		WP_000863430.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	94.8	25.6	53.6
MGA_298	LOCUS_02260	sequence066:2699..3043(-)	internal_stop_codon	2699..2701(-)		WP_000863430.1	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	99.1	27.3	34.2
MGA_299	LOCUS_02270	sequence066:3058..3861(-)	internal_stop_codon	3967..3969(-),3886..3888(-)		WP_011182937.1	alpha-ketoacid dehydrogenase subunit beta	99.3	80.5	57.4
MGA_300	LOCUS_02280	sequence066:4602..4853(-)	internal_stop_codon	4377..4379(-),4884..4886(-),4596..4598(-),4563..4565(-),4602..4604(-)		WP_010874749.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	100.0	23.2	49.4
MGA_301	LOCUS_02290	sequence066:4884..5168(-)	internal_stop_codon	4602..4604(-),4884..4886(-),4596..4598(-)		WP_011182936.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	93.6	22.7	46.6
MGA_305	LOCUS_02330	sequence066:6609..7640(-)	internal_stop_codon	7647..7649(-),7848..7850(-)		WP_010874750.1	FAD-dependent oxidoreductase	97.1	69.5	44.7
MGA_306	LOCUS_02340	sequence066:7848..7988(-)	internal_stop_codon	7647..7649(-),7848..7850(-)		WP_011166460.1	FAD-dependent oxidoreductase	100.0	10.1	58.7
MGA_319	LOCUS_02420	sequence070:332..667(-)	partial			WP_011183201.1	DNA (cytosine-5-)-methyltransferase	92.8	28.4	43.6
MGA_335	LOCUS_02520	sequence077:435..1175(+)	internal_stop_codon	423..425(+)		WP_000003348.1	oligoendopeptidase F	98.8	39.3	42.0
MGA_347	LOCUS_02640	sequence077:6619..6882(+)	internal_stop_codon	6880..6882(+)		WP_010874574.1	ABC transporter ATP-binding protein	93.1	18.9	43.2
MGA_348	LOCUS_02650	sequence077:7087..7395(+)	internal_stop_codon	6880..6882(+),7393..7395(+)		WP_010874574.1	ABC transporter ATP-binding protein	99.0	23.9	59.4
MGA_349	LOCUS_02660	sequence077:7435..7680(+)	internal_stop_codon	7393..7395(+)		WP_003566704.1	ABC transporter ATP-binding protein	84.0	19.4	60.3
MGA_350	LOCUS_02670	sequence077:7670..8071(+)	partial			WP_003548861.1	ATP-binding cassette domain-containing protein	94.7	39.8	50.8
MGA_357	LOCUS_02700	sequence080:41..448(+)	partial			WP_011183537.1	MurR/RpiR family transcriptional regulator	97.8	50.9	28.3
MGA_361	LOCUS_02720	sequence084:435..602(+)	internal_stop_codon	600..602(+)		WP_013448152.1	phosphotransferase	94.5	21.8	57.7
MGA_375	LOCUS_02820	sequence088:7394..7876(-)	internal_stop_codon	7394..7396(-),7967..7969(-),7973..7975(-),8093..8095(-)		WP_011167158.1	aspartate--ammonia ligase	96.9	47.5	60.6
MGA_376	LOCUS_02830	sequence088:8093..8326(-)	internal_stop_codon	7967..7969(-),7973..7975(-),8093..8095(-)		WP_011167158.1	aspartate--ammonia ligase	100.0	23.3	61.0
MGA_378	LOCUS_02850	sequence089:351..992(+)	internal_stop_codon	240..242(+),237..239(+),150..152(+)		WP_003388463.1	nucleotidyltransferase	94.4	55.0	33.6
MGA_395	LOCUS_02930	sequence098:363..653(+)	internal_stop_codon	270..272(+),651..653(+)		WP_001058993.1	ATP-dependent Clp protease ATP-binding subunit ClpL	80.2	12.7	39.3
MGA_398	LOCUS_02950	sequence099:1359..1781(-)	internal_stop_codon	1824..1826(-)		WP_010989583.1	cation-translocating P-type ATPase	90.7	14.3	24.4
MGA_399	LOCUS_02960	sequence099:1824..2144(-)	internal_stop_codon	2169..2171(-),1824..1826(-)		WP_010874566.1	cation-transporting P-type ATPase	100.0	12.4	51.9
MGA_400	LOCUS_02970	sequence099:2169..2435(-)	internal_stop_codon	2547..2549(-),2169..2171(-)		WP_011861573.1	cation-translocating P-type ATPase	100.0	10.0	62.5
MGA_402	LOCUS_02990	sequence099:3141..3995(-)	internal_stop_codon	3141..3143(-)		WP_011949094.1	cation-translocating P-type ATPase	84.9	25.3	41.7
MGA_403	LOCUS_03000	sequence099:4181..4717(-)	internal_stop_codon	4718..4720(-)		WP_011183018.1	deoxyribose-phosphate aldolase	98.9	80.0	56.8
MGA_404	LOCUS_03010	sequence099:4718..4843(-)	internal_stop_codon	4718..4720(-)		WP_002356166.1	deoxyribose-phosphate aldolase	95.1	17.7	64.1
MGA_405	LOCUS_03020	sequence099:4855..5118(-)	internal_stop_codon	5164..5166(-)		WP_010905974.1	pyrimidine-nucleoside phosphorylase	90.8	18.4	44.3
MGA_406	LOCUS_03030	sequence099:5164..6150(-)	internal_stop_codon	5164..5166(-)		WP_002356165.1	pyrimidine-nucleoside phosphorylase	97.3	73.7	59.6
MGA_409	LOCUS_03060	sequence099:7867..8262(+)	internal_stop_codon	8260..8262(+)		WP_011861198.1	cysteine hydrolase	99.2	62.1	36.6
MGA_418	LOCUS_03100	sequence103:427..795(+)	partial			WP_011861230.1	ABC transporter ATP-binding protein	88.5	17.8	61.1
MGA_439	LOCUS_03220	sequence110:6599..7045(+)	internal_stop_codon	7133..7135(+),7307..7309(+),7043..7045(+)		WP_011166830.1	DUF4011 domain-containing protein	95.9	22.7	44.5
MGA_440	LOCUS_03230	sequence110:7442..8107(+)	internal_stop_codon	8105..8107(+),7307..7309(+)		WP_011166830.1	DUF4011 domain-containing protein	98.2	33.7	58.1
MGA_443	LOCUS_03260	sequence111:1599..1817(+)	internal_stop_codon	1494..1496(+),1815..1817(+),1935..1937(+)		WP_011183298.1	phenylalanine--tRNA ligase subunit alpha	98.6	22.0	45.5
MGA_444	LOCUS_03270	sequence111:1959..2129(+)	internal_stop_codon	1935..1937(+),1815..1817(+)		WP_011393252.1	phenylalanine--tRNA ligase subunit alpha	92.9	15.6	54.7
MGA_445	LOCUS_03280	sequence111:2119..2448(+)	internal_stop_codon	2446..2448(+),2527..2529(+)		WP_011963183.1	uracil-DNA glycosylase	87.2	43.2	39.6
MGA_452	LOCUS_03350	sequence111:6348..6491(-)	internal_stop_codon	6540..6542(-)		WP_000808106.1	translation elongation factor Ts	93.6	15.5	59.1
MGA_456	LOCUS_03390	sequence111:7238..7753(-)	internal_stop_codon	7787..7789(-),8012..8014(-)		WP_000111480.1	30S ribosomal protein S2	93.0	60.2	33.9
MGA_457	LOCUS_03400	sequence111:7787..8002(-)	internal_stop_codon	7787..7789(-),8012..8014(-)		WP_001832557.1	30S ribosomal protein S2	100.0	26.3	46.5
MGA_464	LOCUS_03470	sequence111:10752..11105(-)	internal_stop_codon	10752..10754(-),11118..11120(-)		WP_010889738.1	magnesium transporter	86.3	20.0	33.7
MGA_465	LOCUS_03480	sequence111:11118..11486(-)	internal_stop_codon	11541..11543(-),11118..11120(-)		WP_011183114.1	magnesium transporter	99.2	26.1	34.4
MGA_466	LOCUS_03490	sequence111:11541..12008(-)	internal_stop_codon	11541..11543(-)		WP_005898141.1	magnesium transporter	91.6	31.6	31.0
MGA_467	LOCUS_03500	sequence111:12011..12589(-)	partial			WP_011254229.1	diadenylate cyclase CdaA	75.5	51.1	44.5
MGA_470	LOCUS_03530	sequence111:13153..14247(-)	internal_stop_codon	14311..14313(-),13153..13155(-)		WP_001831649.1	ribonuclease J	99.5	64.3	38.7
MGA_471	LOCUS_03540	sequence111:14311..14730(-)	internal_stop_codon	14311..14313(-)		WP_011166843.1	ribonuclease J	91.4	20.8	45.7
MGA_475	LOCUS_03580	sequence111:15937..16215(+)	internal_stop_codon	16471..16473(+),16420..16422(+),16390..16392(+),16213..16215(+)		WP_010874452.1	amino acid permease	67.4	24.4	37.1
MGA_480	LOCUS_03630	sequence111:17807..18322(-)	internal_stop_codon	18323..18325(-),17807..17809(-)		WP_011166290.1	asparagine--tRNA ligase	100.0	38.5	53.4
MGA_481	LOCUS_03640	sequence111:18323..18790(-)	internal_stop_codon	18947..18949(-),18323..18325(-)		WP_010966534.1	asparagine--tRNA ligase	98.1	35.2	48.5
MGA_482	LOCUS_03650	sequence111:19192..19614(+)	internal_stop_codon	19612..19614(+)		WP_011183530.1	peptide chain release factor 1	98.6	38.0	46.4
MGA_483	LOCUS_03660	sequence111:19630..20271(+)	internal_stop_codon	19612..19614(+)		WP_011183530.1	peptide chain release factor 1	97.7	57.6	59.5
MGA_484	LOCUS_03670	sequence111:20271..20573(+)	internal_stop_codon	20571..20573(+)		WP_011964123.1	peptide chain release factor N(5)-glutamine methyltransferase	95.0	33.0	40.8
MGA_485	LOCUS_03680	sequence111:20709..20900(+)	internal_stop_codon	20898..20900(+),20571..20573(+),20901..20903(+)		WP_011475835.1	peptide chain release factor N(5)-glutamine methyltransferase	100.0	23.3	50.8
MGA_506	LOCUS_03780	sequence122:409..1485(-)	internal_stop_codon	409..411(-)		WP_011183072.1	pyruvate kinase	98.0	73.4	63.2
MGA_507	LOCUS_03790	sequence122:3081..3344(+)	internal_stop_codon	3561..3563(+),3441..3443(+),3342..3344(+)		WP_011166694.1	DNA topoisomerase IV subunit B	96.6	13.1	70.2
MGA_508	LOCUS_03800	sequence122:4058..4564(+)	internal_stop_codon	4646..4648(+),4607..4609(+),4562..4564(+)		WP_005458327.1	endonuclease	58.9	17.7	35.6
MGA_524	LOCUS_03860	sequence130:37..399(-)	partial			WP_001113932.1	ribosome small subunit-dependent GTPase A	94.2	39.6	40.7
MGA_532	LOCUS_03900	sequence133:2841..3857(+)	internal_stop_codon	3855..3857(+)		WP_010880145.1	serine--tRNA ligase	100.0	79.8	43.8
MGA_533	LOCUS_03910	sequence133:3903..4109(+)	internal_stop_codon	3855..3857(+)		WP_002355965.1	serine--tRNA ligase	97.1	15.6	69.7
MGA_534	LOCUS_03920	sequence133:4109..4483(+)	partial			WP_013097512.1	pyridoxal phosphatase	61.3	27.2	39.5
MGA_535	LOCUS_03930	sequence133:4502..4942(+)	partial			WP_003722653.1	Cof-type HAD-IIB family hydrolase	67.1	37.5	40.4
MGA_536	LOCUS_03940	sequence133:5532..5834(+)	partial			WP_011476106.1	Cof-type HAD-IIB family hydrolase	99.0	36.8	37.0
MGA_537	LOCUS_03950	sequence133:5906..6223(-)	internal_stop_codon	6383..6385(-)		WP_011182916.1	ABC transporter ATP-binding protein	100.0	17.4	59.0
MGA_538	LOCUS_03960	sequence133:6383..6826(-)	internal_stop_codon	6383..6385(-)		WP_011166241.1	ABC transporter ATP-binding protein	53.7	23.0	46.8
MGA_542	LOCUS_03970	sequence136:107..424(-)	internal_stop_codon	107..109(-),551..553(-)		WP_010874816.1	potassium transporter TrkG	95.2	20.0	34.5
MGA_544	LOCUS_03980	sequence137:53..>670(-)	partial			WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	87.8	16.3	31.7
MGA_557	LOCUS_04040	sequence144:1482..2639(-)	partial			WP_020862721.1	endopeptidase La	97.1	47.1	54.5
MGA_561	LOCUS_04080	sequence144:4948..5550(+)	internal_stop_codon	5548..5550(+)		WP_013447835.1	NAD(+) synthase	90.5	75.1	45.9
MGA_565	LOCUS_04120	sequence145:64..558(-)	partial			WP_010966431.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	94.5	66.7	32.1
MGA_585	LOCUS_04200	sequence155:2172..2315(-)	internal_stop_codon	2172..2174(-),2556..2558(-),2385..2387(-),2454..2456(-),2139..2141(-),2541..2543(-),2046..2048(-)		WP_003643180.1	leucine--tRNA ligase	89.4	5.2	78.6
MGA_587	LOCUS_04220	sequence155:3771..3893(-)	internal_stop_codon	3645..3647(-),3603..3605(-),3594..3596(-),3954..3956(-),3771..3773(-),3966..3968(-)		WP_001108730.1	leucine--tRNA ligase	100.0	5.0	82.5
MGA_588	LOCUS_04230	sequence155:4233..5198(+)	internal_stop_codon	5412..5414(+),5196..5198(+)		WP_002261954.1	GTPase ObgE	98.1	75.0	46.5
MGA_590	LOCUS_04250	sequence155:5551..5886(-)	internal_stop_codon	6139..6141(-),5887..5889(-),5941..5943(-),5908..5910(-)		WP_011167050.1	lipoprotein	98.2	15.0	49.6
MGA_593	LOCUS_04280	sequence155:6667..7116(-)	internal_stop_codon	6667..6669(-)		WP_011166263.1	DUF31 family protein	62.4	13.3	40.9
MGA_610	LOCUS_04320	sequence166:116..739(-)	internal_stop_codon	803..805(-),116..118(-)		WP_205842899.1	DUF31 family protein	58.0	16.1	34.4
MGA_613	LOCUS_04350	sequence166:2333..2755(-)	internal_stop_codon	2900..2902(-)		WP_205842899.1	DUF31 family protein	98.6	18.1	47.1
MGA_617	LOCUS_04390	sequence166:5115..5525(-)	internal_stop_codon	5115..5117(-),5790..5792(-)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	40.4	66.9
MGA_618	LOCUS_04400	sequence166:5790..6044(-)	internal_stop_codon	5790..5792(-)		WP_003421962.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	25.1	71.4
MGA_630	LOCUS_04450	sequence176:173..469(+)	internal_stop_codon	470..472(+),467..469(+)		WP_011183207.1	DNA topoisomerase IV subunit A	93.9	10.1	70.7
MGA_631	LOCUS_04460	sequence176:476..1636(+)	internal_stop_codon	1916..1918(+),1634..1636(+),470..472(+),467..469(+)		WP_011166695.1	DNA topoisomerase IV subunit A	100.0	42.0	49.0
MGA_635	LOCUS_04500	sequence176:2750..3262(+)	internal_stop_codon	3260..3262(+)		WP_000369671.1	lysine--tRNA ligase	99.4	34.5	46.6
MGA_636	LOCUS_04510	sequence176:3317..4072(+)	internal_stop_codon	3260..3262(+),4070..4072(+)		WP_002894992.1	lysine--tRNA ligase	100.0	51.4	57.3
MGA_638	LOCUS_04530	sequence176:4832..4987(+)	internal_stop_codon	4829..4831(+),4985..4987(+)		WP_211204934.1	site-specific DNA-methyltransferase	100.0	9.9	68.6
MGA_640	LOCUS_04550	sequence176:5525..5797(+)	partial			WP_011202294.1	site-specific DNA-methyltransferase	91.1	14.2	55.4
MGA_660	LOCUS_04630	sequence187:206..634(+)	internal_stop_codon	164..166(+)		WP_002679664.1	ABC transporter permease	85.9	32.3	31.1
MGA_661	LOCUS_04640	sequence187:1054..1242(+)	internal_stop_codon	1240..1242(+)		WP_011183562.1	ABC transporter permease	98.4	19.1	45.9
MGA_664	LOCUS_04670	sequence187:2040..2372(-)	internal_stop_codon	2520..2522(-),2472..2474(-),2556..2558(-)		WP_003229758.1	aspartate--tRNA ligase	99.1	18.4	53.2
MGA_665	LOCUS_04680	sequence187:2556..3677(-)	internal_stop_codon	3678..3680(-),2472..2474(-),2520..2522(-),2556..2558(-)		WP_011166529.1	aspartate--tRNA ligase	98.4	65.0	45.1
MGA_666	LOCUS_04690	sequence187:3742..4806(-)	internal_stop_codon	4813..4815(-)		WP_002289103.1	histidine--tRNA ligase	70.1	56.5	41.8
MGA_667	LOCUS_04700	sequence187:4813..5091(-)	internal_stop_codon	4813..4815(-)		WP_004080372.1	histidine--tRNA ligase	97.8	21.7	44.0
MGA_668	LOCUS_04710	sequence187:5579..6034(+)	partial			WP_011183085.1	translation initiation factor IF-3	88.1	74.4	48.1
MGA_670	LOCUS_04730	sequence187:6541..6672(+)	internal_stop_codon	6370..6372(+),6448..6450(+),6502..6504(+)		WP_010965656.1	50S ribosomal protein L20	97.7	35.3	64.3
MGA_671	LOCUS_04740	sequence187:6832..7575(-)	internal_stop_codon	6832..6834(-)		WP_002438915.1	DNA-binding protein WhiA	93.1	77.1	28.8
MGA_687	LOCUS_04840	sequence194:5060..5533(+)	internal_stop_codon	5015..5017(+)		WP_010965924.1	ribosome biogenesis GTP-binding protein YihA/YsxC	98.1	75.5	41.6
MGA_690	LOCUS_04870	sequence194:6463..6618(+)	internal_stop_codon	6850..6852(+),6616..6618(+)		WP_010874884.1	inorganic diphosphatase	94.1	26.1	62.5
MGA_691	LOCUS_04880	sequence194:6640..6852(+)	internal_stop_codon	6850..6852(+),6616..6618(+)		WP_011173971.1	inorganic diphosphatase	98.6	39.4	40.6
MGA_704	LOCUS_04920	sequence203:606..986(-)	internal_stop_codon	1224..1226(-)		WP_011166801.1	DUF31 family protein	87.3	12.9	56.2
MGA_705	LOCUS_04930	sequence203:2010..2837(-)	internal_stop_codon	2010..2012(-)		WP_020862862.1	DUF31 family protein	83.6	27.5	34.7
MGA_707	LOCUS_04950	sequence203:3995..4267(-)	internal_stop_codon	3995..3997(-)		WP_011166802.1	putative immunoglobulin-blocking virulence protein	97.8	11.7	50.0
MGA_709	LOCUS_04970	sequence203:5143..5826(-)	internal_stop_codon	5833..5835(-),5854..5856(-)		WP_011166808.1	putative immunoglobulin-blocking virulence protein	94.3	28.3	46.8
MGA_710	LOCUS_04980	sequence203:5854..6204(-)	internal_stop_codon	6280..6282(-),5833..5835(-),5854..5856(-)		WP_011166804.1	putative immunoglobulin-blocking virulence protein	99.1	15.9	52.9
MGA_729	LOCUS_05060	sequence211:2543..2746(+)	internal_stop_codon	2447..2449(+),2324..2326(+),2510..2512(+)		WP_011262514.1	sugar ABC transporter permease	100.0	22.4	46.4
MGA_736	LOCUS_05130	sequence211:6400..>7084(-)	partial			WP_002485248.1	aldehyde dehydrogenase	82.4	42.9	40.6
MGA_739	LOCUS_05160	sequence212:1251..1823(+)	internal_stop_codon	1821..1823(+)		WP_011183134.1	signal recognition particle-docking protein FtsY	98.9	54.0	40.5
MGA_740	LOCUS_05170	sequence212:1956..2297(+)	internal_stop_codon	1821..1823(+)		WP_000007678.1	signal recognition particle-docking protein FtsY	100.0	27.2	60.2
MGA_749	LOCUS_05260	sequence212:8054..8269(-)	internal_stop_codon	8054..8056(-),7796..7798(-)		WP_003225828.1	type I methionyl aminopeptidase	93.0	26.6	50.0
MGA_750	LOCUS_05270	sequence212:9063..9416(-)	frameshift,internal_stop_codon	9545..9547(-),9587..9589(-)	9076,9484,8983	WP_042733551.1	IS3 family transposase	93.2	25.8	49.1
MGA_768	LOCUS_05390	sequence217:1..804(+)	partial			WP_011183482.1	tRNA 4-thiouridine(8) synthase ThiI	82.4	55.2	48.9
MGA_769	LOCUS_05400	sequence217:1005..1331(+)	internal_stop_codon	1329..1331(+)		WP_205842938.1	phosphotriesterase	100.0	30.8	93.5
MGA_770	LOCUS_05410	sequence217:1365..2060(+)	internal_stop_codon	1329..1331(+)		WP_205842938.1	phosphotriesterase	100.0	65.8	90.5
MGA_771	LOCUS_05420	sequence217:2645..2803(+)	internal_stop_codon	2801..2803(+),2624..2626(+),2885..2887(+)		WP_010874852.1	PTS ascorbate transporter subunit IIC	100.0	7.9	61.5
MGA_773	LOCUS_05440	sequence217:3212..3496(+)	frameshift,internal_stop_codon	3632..3634(+),3659..3661(+),3494..3496(+),3113..3115(+),3689..3691(+)	3585	WP_010874852.1	PTS ascorbate transporter subunit IIC	100.0	14.2	73.4
MGA_776	LOCUS_05470	sequence217:4333..4608(+)	internal_stop_codon	4201..4203(+)		WP_010874850.1	PTS sugar transporter subunit IIA	98.9	56.6	51.1
MGA_777	LOCUS_05480	sequence217:4619..4978(+)	internal_stop_codon	5024..5026(+),4994..4996(+),5063..5065(+),4976..4978(+)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	55.0	60.0
MGA_778	LOCUS_05490	sequence217:5105..5266(+)	internal_stop_codon	5024..5026(+),4994..4996(+),5063..5065(+),4976..4978(+)		WP_010874849.1	3-dehydro-L-gulonate-6-phosphate decarboxylase	100.0	24.3	71.7
MGA_779	LOCUS_05500	sequence217:5484..5939(+)	internal_stop_codon	5325..5327(+),5418..5420(+),6021..6023(+),5937..5939(+)		WP_010874848.1	L-ribulose-5-phosphate 3-epimerase	99.3	49.2	64.7
MGA_780	LOCUS_05510	sequence217:6244..6654(+)	internal_stop_codon	6652..6654(+),6205..6207(+)		WP_010874854.1	L-ribulose-5-phosphate 4-epimerase	99.3	56.2	68.4
MGA_786	LOCUS_05520	sequence224:185..1087(+)	internal_stop_codon	1085..1087(+),1151..1153(+)		WP_010990003.1	excinuclease ABC subunit UvrA	97.3	30.4	52.1
MGA_787	LOCUS_05530	sequence224:1229..3040(+)	internal_stop_codon	1085..1087(+),1151..1153(+)		WP_002485563.1	excinuclease ABC subunit UvrA	99.3	62.9	57.8
MGA_789	LOCUS_05550	sequence224:3560..4045(+)	partial			WP_011167089.1	HPr(Ser) kinase/phosphatase	96.3	50.8	44.0
MGA_793	LOCUS_05590	sequence224:5039..5191(+)	internal_stop_codon	5189..5191(+),5216..5218(+)		WP_003722610.1	thioredoxin-disulfide reductase	98.0	15.4	61.2
MGA_794	LOCUS_05600	sequence224:5378..5965(+)	internal_stop_codon	5189..5191(+),5216..5218(+)		WP_000272320.1	thioredoxin-disulfide reductase	89.7	57.8	40.0
MGA_810	LOCUS_05720	sequence230:206..700(+)	internal_stop_codon	698..700(+)		WP_011166475.1	30S ribosomal protein S4	97.6	77.9	58.0
MGA_812	LOCUS_05740	sequence230:1229..1450(+)	internal_stop_codon	1676..1678(+),1448..1450(+)		WP_010874408.1	type 2 glycerol-3-phosphate oxidase	83.6	15.9	60.7
MGA_813	LOCUS_05750	sequence230:1502..1678(+)	internal_stop_codon	1676..1678(+),1448..1450(+)		WP_013447578.1	type 2 glycerol-3-phosphate oxidase	98.3	14.7	57.9
MGA_814	LOCUS_05760	sequence230:1712..2383(+)	internal_stop_codon	1676..1678(+),1448..1450(+)		WP_013447578.1	type 2 glycerol-3-phosphate oxidase	95.5	55.0	61.5
MGA_815	LOCUS_05770	sequence230:2392..2523(+)	internal_stop_codon	2521..2523(+),2749..2751(+),2548..2550(+),2698..2700(+),2656..2658(+)		WP_011166455.1	glycerol kinase GlpK	93.0	7.9	55.0
MGA_816	LOCUS_05780	sequence230:3109..3276(+)	internal_stop_codon	2902..2904(+),2893..2895(+),3274..3276(+),2818..2820(+),2986..2988(+),3475..3477(+),3085..3087(+),3346..3348(+)		WP_004556718.1	glycerol kinase GlpK	100.0	11.0	70.9
MGA_817	LOCUS_05790	sequence230:3592..3771(+)	internal_stop_codon	3769..3771(+),3346..3348(+),3475..3477(+),3895..3897(+)		WP_011166455.1	glycerol kinase GlpK	100.0	11.7	55.9
MGA_818	LOCUS_05800	sequence230:4394..4543(+)	internal_stop_codon	4259..4261(+),4190..4192(+)		WP_012027843.1	MIP/aquaporin family protein	98.0	20.8	57.1
MGA_819	LOCUS_05810	sequence230:4742..5167(+)	internal_stop_codon	5165..5167(+)		WP_011166915.1	dihydroxyacetone kinase subunit DhaK	99.3	42.8	63.4
MGA_820	LOCUS_05820	sequence230:5204..5719(+)	internal_stop_codon	5165..5167(+)		WP_011166915.1	dihydroxyacetone kinase subunit DhaK	95.3	49.4	53.0
MGA_821	LOCUS_05830	sequence230:5716..6111(+)	internal_stop_codon	6109..6111(+)		WP_001830509.1	dihydroxyacetone kinase subunit DhaL	84.7	56.5	52.7
MGA_822	LOCUS_05840	sequence230:6130..6327(+)	internal_stop_codon	6109..6111(+)		WP_000453282.1	dihydroxyacetone kinase subunit DhaL	80.0	27.6	60.4
MGA_826	LOCUS_05870	sequence231:952..1221(-)	internal_stop_codon	1462..1464(-),1282..1284(-)		WP_012028462.1	site-specific integrase	96.6	27.9	70.9
MGA_827	LOCUS_05880	sequence231:1282..1434(-)	internal_stop_codon	1462..1464(-),1282..1284(-)		WP_007058548.1	site-specific integrase	100.0	16.2	68.0
MGA_828	LOCUS_05890	sequence231:1462..1713(-)	internal_stop_codon	1462..1464(-),1282..1284(-),1828..1830(-),1759..1761(-)		WP_012028462.1	site-specific integrase	100.0	26.9	48.2
MGA_833	LOCUS_05940	sequence231:3554..4045(-)	partial			WP_209611766.1	restriction endonuclease subunit S	90.8	39.1	35.8
MGA_834	LOCUS_05950	sequence231:4867..5547(+)	internal_stop_codon	4765..4767(+)		WP_004116510.1	DNA-binding protein	99.1	75.7	74.1
MGA_837	LOCUS_05960	sequence232:143..916(-)	internal_stop_codon	926..928(-)		WP_010870059.1	M42 family metallopeptidase	93.8	69.7	35.0
MGA_838	LOCUS_05970	sequence232:926..1204(-)	internal_stop_codon	926..928(-)		WP_012583847.1	M42 family metallopeptidase	79.3	20.4	42.5
MGA_844	LOCUS_06030	sequence233:302..535(+)	internal_stop_codon	602..604(+),533..535(+),296..298(+),173..175(+)		WP_003230444.1	phosphopentomutase	100.0	19.0	58.4
MGA_845	LOCUS_06040	sequence233:608..1219(+)	internal_stop_codon	602..604(+),533..535(+)		WP_002494685.1	phosphopentomutase	93.6	48.0	49.7
MGA_848	LOCUS_06070	sequence233:3261..3755(-)	internal_stop_codon	3927..3929(-),3261..3263(-)		WP_000681408.1	type I DNA topoisomerase	94.5	21.2	35.3
MGA_850	LOCUS_06090	sequence233:4218..4457(-)	internal_stop_codon	3927..3929(-),4218..4220(-),4722..4724(-)		WP_003598643.1	type I DNA topoisomerase	74.7	8.1	50.8
MGA_851	LOCUS_06100	sequence233:4722..4874(-)	internal_stop_codon	4722..4724(-)		WP_000246611.1	type I DNA topoisomerase	98.0	6.5	59.2
MGA_854	LOCUS_06130	sequence233:5569..5730(+)	internal_stop_codon	5728..5730(+)		WP_041272405.1	single-stranded DNA-binding protein	100.0	40.8	52.8
MGA_859	LOCUS_06160	sequence234:1077..1235(+)	internal_stop_codon	933..935(+),1233..1235(+),1035..1037(+),1002..1004(+),975..977(+)		WP_000515226.1	LPXTG-anchored adhesin/beta-galactosidase BgaA	100.0	2.3	57.7
MGA_860	LOCUS_06170	sequence234:1287..1661(+)	internal_stop_codon	1902..1904(+),1659..1661(+),1695..1697(+),1233..1235(+),1035..1037(+),1002..1004(+)		WP_013389627.1	discoidin domain-containing protein	99.2	6.3	27.2
MGA_861	LOCUS_06180	sequence234:1719..1904(+)	internal_stop_codon	1659..1661(+),1902..1904(+),1986..1988(+),1695..1697(+)		WP_199567761.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	2.5	63.9
MGA_862	LOCUS_06190	sequence234:3060..3224(+)	internal_stop_codon	3222..3224(+)		WP_140834635.1	Ig-like domain-containing protein	96.3	2.2	63.5
MGA_870	LOCUS_06260	sequence235:1100..1600(+)	internal_stop_codon	1082..1084(+),1598..1600(+)		WP_009895219.1	DUF4116 domain-containing protein	98.8	40.5	26.7
MGA_871	LOCUS_06270	sequence235:1616..2797(+)	internal_stop_codon	2795..2797(+),1598..1600(+),3065..3067(+)		WP_009897920.1	DUF4116 domain-containing protein	97.2	80.5	29.0
MGA_877	LOCUS_06320	sequence236:724..1113(+)	internal_stop_codon	541..543(+)		WP_011166679.1	class I mannose-6-phosphate isomerase	100.0	41.7	32.1
MGA_878	LOCUS_06330	sequence236:1313..2125(-)	internal_stop_codon	1313..1315(-),2177..2179(-)		WP_011183246.1	transketolase	94.8	41.4	41.0
MGA_879	LOCUS_06340	sequence236:2177..2707(-)	internal_stop_codon	2930..2932(-),2711..2713(-),2177..2179(-)		WP_010989730.1	transketolase	86.4	23.2	40.3
MGA_880	LOCUS_06350	sequence236:2711..2887(-)	internal_stop_codon	2930..2932(-),2711..2713(-)		WP_010989730.1	transketolase	100.0	8.9	61.0
MGA_882	LOCUS_06370	sequence236:3444..3785(-)	internal_stop_codon	3795..3797(-),3444..3446(-)		WP_011704190.1	PTS ascorbate transporter subunit IIC	98.2	25.4	58.6
MGA_883	LOCUS_06380	sequence236:3795..4568(-)	internal_stop_codon	3795..3797(-)		WP_011166584.1	PTS ascorbate-specific subunit IIBC	99.2	41.0	38.8
MGA_884	LOCUS_06390	sequence236:4669..4941(-)	partial			WP_011166584.1	PTS ascorbate-specific subunit IIBC	85.6	12.6	40.5
MGA_888	LOCUS_06430	sequence237:173..601(+)	internal_stop_codon	599..601(+)		WP_003230555.1	(d)CMP kinase	99.3	63.8	37.5
MGA_889	LOCUS_06440	sequence237:632..838(+)	internal_stop_codon	599..601(+)		WP_003358949.1	(d)CMP kinase	92.6	28.1	46.0
MGA_890	LOCUS_06450	sequence237:838..978(+)	internal_stop_codon	1225..1227(+),976..978(+)		WP_001831042.1	ribosome biogenesis GTPase Der	93.5	9.9	65.1
MGA_895	LOCUS_06500	sequence237:3671..4582(+)	partial			WP_003732084.1	DNA polymerase III subunit gamma/tau	96.4	50.9	52.2
MGA_898	LOCUS_06530	sequence237:6087..6530(+)	internal_stop_codon	6030..6032(+)		WP_012582670.1	recombination mediator RecR	98.0	73.0	30.6
MGA_901	LOCUS_06560	sequence237:8131..8721(+)	internal_stop_codon	8719..8721(+)		WP_012583798.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	99.5	67.5	46.7
MGA_906	LOCUS_06610	sequence237:12843..13151(+)	internal_stop_codon	13149..13151(+)		WP_010964019.1	tRNA (cytidine(34)-2'-O)-methyltransferase	90.2	56.9	45.7
MGA_907	LOCUS_06620	sequence237:13155..13310(+)	internal_stop_codon	13149..13151(+)		WP_010883298.1	tRNA (cytidine(34)-2'-O)-methyltransferase	96.1	31.4	55.1
MGA_911	LOCUS_06660	sequence237:14670..14867(+)	internal_stop_codon	14865..14867(+),14637..14639(+),14406..14408(+)		WP_001829495.1	ribosome biogenesis GTPase YlqF	86.2	19.5	41.1
MGA_913	LOCUS_06680	sequence237:15211..15597(+)	partial			WP_011249474.1	YigZ family protein	88.3	55.1	44.2
MGA_915	LOCUS_06700	sequence237:15864..16499(+)	internal_stop_codon	16653..16655(+),16674..16676(+),16497..16499(+),16719..16721(+)		WP_011182967.1	M17 family metallopeptidase	81.0	38.2	50.6
MGA_917	LOCUS_06720	sequence237:17036..17947(+)	internal_stop_codon	18188..18190(+),17945..17947(+),18122..18124(+),18143..18145(+),16788..16790(+)		WP_011182967.1	M17 family metallopeptidase	91.1	60.0	39.9
MGA_918	LOCUS_06730	sequence237:17954..18124(+)	internal_stop_codon	17945..17947(+),18122..18124(+),18188..18190(+),18143..18145(+)		WP_010874929.1	leucyl aminopeptidase	98.2	12.4	69.1
MGA_919	LOCUS_06740	sequence237:18194..18433(+)	internal_stop_codon	17945..17947(+),18122..18124(+),18188..18190(+),18143..18145(+)		WP_011015910.1	leucyl aminopeptidase	100.0	17.6	37.9
MGA_923	LOCUS_06760	sequence238:722..892(+)	internal_stop_codon	890..892(+)		WP_002894857.1	UMP kinase	94.6	21.6	54.7
MGA_924	LOCUS_06770	sequence238:950..1441(+)	internal_stop_codon	890..892(+)		WP_002293877.1	UMP kinase	95.1	64.2	50.3
MGA_929	LOCUS_06820	sequence238:4985..5503(+)	internal_stop_codon	5501..5503(+)		WP_011947941.1	TatD family hydrolase	98.8	61.4	36.5
MGA_930	LOCUS_06830	sequence238:5516..5788(+)	internal_stop_codon	5501..5503(+)		WP_033448020.1	TatD family hydrolase	94.4	33.2	43.5
MGA_933	LOCUS_06850	sequence239:653..1444(+)	partial			WP_201781412.1	site-specific DNA-methyltransferase	94.3	38.8	50.8
MGA_934	LOCUS_06860	sequence239:1475..2293(+)	partial			WP_010951099.1	DNA methyltransferase	79.4	29.6	35.3
MGA_935	LOCUS_06870	sequence239:2286..3107(+)	internal_stop_codon	3105..3107(+)		WP_034260979.1	DEAD/DEAH box helicase family protein	84.6	25.6	44.2
MGA_936	LOCUS_06880	sequence239:3132..4901(+)	internal_stop_codon	3105..3107(+)		WP_034260979.1	DEAD/DEAH box helicase family protein	98.8	67.7	35.6
MGA_939	LOCUS_06900	sequence240:1514..1663(+)	internal_stop_codon	1787..1789(+),1781..1783(+),1661..1663(+),1823..1825(+)		WP_002352358.1	valine--tRNA ligase	93.9	5.2	67.4
MGA_940	LOCUS_06910	sequence240:2027..2509(+)	internal_stop_codon	2612..2614(+),1823..1825(+),2633..2635(+),1787..1789(+),2729..2731(+),1961..1963(+),2798..2800(+),2678..2680(+),2654..2656(+),2507..2509(+),2657..2659(+),2759..2761(+),1781..1783(+)		WP_012583452.1	valine--tRNA ligase	100.0	18.3	41.0
MGA_941	LOCUS_06920	sequence240:2888..3052(+)	internal_stop_codon	2633..2635(+),2612..2614(+),2798..2800(+),2729..2731(+),3326..3328(+),2678..2680(+),3140..3142(+),2654..2656(+),2657..2659(+),2759..2761(+),3050..3052(+),2876..2878(+),3119..3121(+)		WP_002899695.1	valine--tRNA ligase	100.0	6.1	68.5
MGA_943	LOCUS_06940	sequence240:3380..3928(+)	internal_stop_codon	3119..3121(+),3326..3328(+),3140..3142(+)		WP_011183252.1	valine--tRNA ligase	86.8	19.7	30.2
MGA_945	LOCUS_06960	sequence240:4763..5485(+)	internal_stop_codon	5483..5485(+)		WP_011183071.1	6-phosphofructokinase	99.6	73.7	53.1
MGA_952	LOCUS_07030	sequence241:1916..2248(-)	internal_stop_codon	1916..1918(-)		WP_010879950.1	nicotinate (nicotinamide) nucleotide adenylyltransferase	100.0	66.7	43.4
MGA_954	LOCUS_07050	sequence241:2963..3496(-)	internal_stop_codon	2963..2965(-)		WP_011166731.1	DNA polymerase IV	97.7	42.5	35.8
MGA_955	LOCUS_07060	sequence241:3567..3911(-)	internal_stop_codon	3567..3569(-)		WP_011166686.1	iron-sulfur cluster assembly scaffold protein	82.5	65.5	41.1
MGA_956	LOCUS_07070	sequence241:3901..4425(-)	internal_stop_codon	4702..4704(-)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	97.7	44.2	48.0
MGA_957	LOCUS_07080	sequence241:4702..5055(-)	internal_stop_codon	4702..4704(-)		WP_129622721.1	aminotransferase class V-fold PLP-dependent enzyme	98.3	30.0	44.0
MGA_961	LOCUS_07110	sequence242:481..870(+)	internal_stop_codon	400..402(+),868..870(+)		WP_010964145.1	class II fructose-1,6-bisphosphate aldolase	100.0	44.6	63.6
MGA_963	LOCUS_07130	sequence242:1854..2342(+)	internal_stop_codon	2340..2342(+)		WP_011182903.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	75.9	19.4	73.2
MGA_964	LOCUS_07140	sequence242:2478..3884(+)	internal_stop_codon	2340..2342(+)		WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.8	71.9	52.7
MGA_975	LOCUS_07230	sequence244:1059..1271(-)	internal_stop_codon	1365..1367(-),1059..1061(-)		WP_011183074.1	threonine--tRNA ligase	98.6	10.7	68.1
MGA_976	LOCUS_07240	sequence244:1365..1871(-)	internal_stop_codon	1365..1367(-),2016..2018(-),1884..1886(-),2067..2069(-)		WP_011183074.1	threonine--tRNA ligase	98.8	26.2	54.4
MGA_977	LOCUS_07250	sequence244:2067..2495(-)	internal_stop_codon	2016..2018(-),1884..1886(-),2067..2069(-)		WP_000435143.1	threonine--tRNA ligase	99.3	21.2	42.1
MGA_978	LOCUS_07260	sequence244:2482..3180(-)	internal_stop_codon	3220..3222(-)		WP_084322456.1	tryptophan--tRNA ligase	96.1	64.3	45.1
MGA_979	LOCUS_07270	sequence244:3220..3495(-)	internal_stop_codon	3220..3222(-)		WP_012048270.1	tryptophan--tRNA ligase	94.5	25.6	47.7
MGA_986	LOCUS_07330	sequence245:1860..2207(-)	internal_stop_codon	2253..2255(-),2277..2279(-),1860..1862(-)		WP_010874414.1	ABC transporter permease	98.3	38.8	35.1
MGA_988	LOCUS_07350	sequence245:2404..3018(-)	partial			WP_005694014.1	spermidine/putrescine ABC transporter permease PotB	90.2	67.8	29.4
MGA_990	LOCUS_07370	sequence245:3620..3994(-)	internal_stop_codon	3620..3622(-),4052..4054(-)		WP_010874412.1	ATP-binding cassette domain-containing protein	97.6	21.6	59.5
MGA_991	LOCUS_07380	sequence245:4412..4597(-)	internal_stop_codon	4412..4414(-)		WP_011183409.1	ABC transporter ATP-binding protein	88.5	15.4	61.1
MGA_1005	LOCUS_07500	sequence247:772..1209(+)	internal_stop_codon	1207..1209(+)		WP_010874491.1	ABC transporter ATP-binding protein	74.5	18.4	57.4
MGA_1006	LOCUS_07510	sequence247:1690..2304(+)	internal_stop_codon	2302..2304(+)		WP_010874491.1	ABC transporter ATP-binding protein	82.8	29.9	40.3
MGA_1007	LOCUS_07520	sequence247:2371..2862(+)	internal_stop_codon	2302..2304(+)		WP_010874491.1	ABC transporter ATP-binding protein	98.8	27.1	41.6
MGA_1009	LOCUS_07540	sequence247:3473..3844(+)	internal_stop_codon	3236..3238(+),3431..3433(+),3251..3253(+),3368..3370(+)		WP_010874492.1	sugar ABC transporter permease	91.1	34.0	47.3
MGA_1014	LOCUS_07580	sequence248:510..725(+)	internal_stop_codon	456..458(+),723..725(+),768..770(+)		WP_011183397.1	alpha,alpha-phosphotrehalase	95.8	11.9	45.6
MGA_1016	LOCUS_07600	sequence248:1117..2184(+)	internal_stop_codon	2389..2391(+),2359..2361(+),2347..2349(+),2182..2184(+)		WP_010990086.1	glycoside hydrolase family 65 protein	97.2	43.3	28.4
MGA_1017	LOCUS_07610	sequence248:2518..2742(+)	internal_stop_codon	2389..2391(+),2740..2742(+),2347..2349(+),2359..2361(+)		WP_002288124.1	glycosyl hydrolase family 65 protein	85.1	8.5	49.2
MGA_1018	LOCUS_07620	sequence248:2746..3270(+)	internal_stop_codon	2740..2742(+),3313..3315(+),3268..3270(+)		WP_013096414.1	glycoside hydrolase family 65 protein	83.9	19.1	39.5
MGA_1019	LOCUS_07630	sequence248:3647..4159(+)	internal_stop_codon	4157..4159(+),3563..3565(+)		WP_011476249.1	beta-phosphoglucomutase	95.3	71.7	42.0
MGA_1021	LOCUS_07650	sequence248:6103..6840(+)	partial			WP_011022105.1	McrB family protein	84.5	26.4	35.7
MGA_1023	LOCUS_07670	sequence248:7437..8612(+)	partial			WP_011022105.1	McrB family protein	67.0	36.0	33.1
MGA_1031	LOCUS_07750	sequence248:12306..12665(+)	internal_stop_codon	12276..12278(+)		WP_010906417.1	50S ribosomal protein L13	99.2	79.7	61.0
MGA_1039	LOCUS_07820	sequence249:1479..1775(-)	internal_stop_codon	2007..2009(-),1251..1253(-),1467..1469(-),1827..1829(-),1479..1481(-)		WP_013390216.1	discoidin domain-containing protein	100.0	6.0	44.4
MGA_1044	LOCUS_07870	sequence250:92..508(+)	internal_stop_codon	506..508(+)		WP_003434984.1	ribonuclease R	89.1	16.3	30.1
MGA_1045	LOCUS_07880	sequence250:587..2227(+)	internal_stop_codon	506..508(+)		WP_011948032.1	ribonuclease R	92.7	69.5	40.4
MGA_1047	LOCUS_07900	sequence250:2646..3014(+)	internal_stop_codon	2565..2567(+)		WP_000390783.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	87.7	41.8	34.3
MGA_1055	LOCUS_07980	sequence251:3205..3657(+)	internal_stop_codon	3655..3657(+)		WP_011183137.1	methionine adenosyltransferase	100.0	41.6	52.2
MGA_1056	LOCUS_07990	sequence251:3670..4020(+)	internal_stop_codon	3655..3657(+),4285..4287(+),4018..4020(+)		WP_011183137.1	methionine adenosyltransferase	100.0	30.8	68.1
MGA_1057	LOCUS_08000	sequence251:4048..4287(+)	internal_stop_codon	4285..4287(+),4018..4020(+)		WP_011475757.1	methionine adenosyltransferase	100.0	19.9	57.0
MGA_1061	LOCUS_08030	sequence252:927..1304(-)	internal_stop_codon	927..929(-),1504..1506(-),864..866(-)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	96.8	37.3	51.2
MGA_1063	LOCUS_08050	sequence252:1837..2271(-)	internal_stop_codon	1837..1839(-),2482..2484(-)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	97.9	44.4	46.5
MGA_1065	LOCUS_08070	sequence252:2482..2751(-)	internal_stop_codon	2815..2817(-),2482..2484(-)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	95.5	25.9	42.4
MGA_1066	LOCUS_08080	sequence252:2815..3252(-)	internal_stop_codon	2815..2817(-)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	97.2	44.4	44.4
MGA_1073	LOCUS_08130	sequence253:925..1218(+)	internal_stop_codon	1216..1218(+),1273..1275(+)		WP_011183486.1	nicotinate phosphoribosyltransferase	99.0	27.6	44.3
MGA_1074	LOCUS_08140	sequence253:1315..1590(+)	internal_stop_codon	1588..1590(+),1612..1614(+),1216..1218(+),1273..1275(+)		WP_000658370.1	nicotinate phosphoribosyltransferase	100.0	23.7	49.5
MGA_1089	LOCUS_08280	sequence255:555..1049(-)	internal_stop_codon	555..557(-),507..509(-)		WP_011101610.1	deoxyribonuclease IV	100.0	55.7	41.8
MGA_1092	LOCUS_08310	sequence255:3133..3363(-)	partial			WP_011166919.1	LacI family DNA-binding transcriptional regulator	86.8	58.4	39.4
MGA_1102	LOCUS_08400	sequence257:566..1033(+)	internal_stop_codon	1031..1033(+)		WP_011167112.1	PDxFFG protein	87.1	6.4	27.4
MGA_1104	LOCUS_08420	sequence257:2039..2722(+)	internal_stop_codon	2720..2722(+)		WP_011167112.1	PDxFFG protein	91.2	10.3	36.5
MGA_1111	LOCUS_08470	sequence258:855..1583(+)	partial			WP_003245033.1	DAK2 domain-containing protein	88.4	38.7	44.2
MGA_1112	LOCUS_08480	sequence258:1583..2032(+)	internal_stop_codon	2030..2032(+)		WP_000684092.1	phosphate acyltransferase PlsX	98.7	45.8	33.8
MGA_1113	LOCUS_08490	sequence258:2126..2557(+)	internal_stop_codon	2030..2032(+)		WP_012047867.1	phosphate acyltransferase PlsX	95.1	40.3	39.7
MGA_1115	LOCUS_08510	sequence258:3242..3379(+)	internal_stop_codon	3377..3379(+)		WP_092731919.1	chromosome segregation protein SMC	100.0	3.8	64.4
MGA_1120	LOCUS_08540	sequence259:1527..1913(+)	internal_stop_codon	1911..1913(+),2127..2129(+)		WP_011167113.1	ABC transporter substrate-binding protein	53.9	8.5	41.7
MGA_1121	LOCUS_08550	sequence259:2709..3071(+)	internal_stop_codon	3069..3071(+),3243..3245(+)		WP_011167113.1	ABC transporter substrate-binding protein	89.2	10.6	48.6
MGA_1123	LOCUS_08570	sequence259:4562..4945(+)	internal_stop_codon	4943..4945(+),5024..5026(+)		WP_011167114.1	ABC transporter permease	89.8	31.9	45.6
MGA_1125	LOCUS_08590	sequence259:5174..5326(+)	internal_stop_codon	4943..4945(+),5024..5026(+),5324..5326(+)		WP_011167114.1	ABC transporter permease	100.0	14.0	78.0
MGA_1127	LOCUS_08610	sequence259:5749..6009(+)	internal_stop_codon	6007..6009(+),6250..6252(+),6217..6219(+),5728..5730(+),6019..6021(+)		WP_011167115.1	ABC transporter permease	100.0	24.1	46.5
MGA_1129	LOCUS_08630	sequence259:6385..6624(+)	internal_stop_codon	6250..6252(+),6307..6309(+),6217..6219(+)		WP_011167115.1	ABC transporter permease	100.0	23.5	63.3
MGA_1131	LOCUS_08650	sequence259:7242..7469(+)	internal_stop_codon	7467..7469(+)		WP_011167116.1	ABC transporter ATP-binding protein	96.0	15.0	70.8
MGA_1132	LOCUS_08660	sequence259:7521..7982(+)	internal_stop_codon	8229..8231(+),8142..8144(+),7980..7982(+),7467..7469(+)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	31.8	73.2
MGA_1133	LOCUS_08670	sequence259:7998..8144(+)	internal_stop_codon	8229..8231(+),8142..8144(+),7980..7982(+)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	10.0	70.8
MGA_1134	LOCUS_08680	sequence259:8245..8778(+)	internal_stop_codon	8776..8778(+)		WP_011167117.1	ABC transporter ATP-binding protein	92.7	35.8	53.7
MGA_1135	LOCUS_08690	sequence259:9010..9513(+)	internal_stop_codon	9511..9513(+),8776..8778(+)		WP_020863027.1	ABC transporter ATP-binding protein	98.8	37.5	74.5
MGA_1137	LOCUS_08710	sequence259:11453..11713(+)	internal_stop_codon	11711..11713(+)		WP_011166788.1	heat-inducible transcriptional repressor HrcA	79.1	19.4	42.6
MGA_1141	LOCUS_08750	sequence259:13388..13999(+)	internal_stop_codon	14018..14020(+),13997..13999(+)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	72.4
MGA_1142	LOCUS_08760	sequence259:14072..15196(+)	internal_stop_codon	14018..14020(+),13997..13999(+)		WP_011183314.1	molecular chaperone DnaK	97.1	61.3	56.5
MGA_1145	LOCUS_08790	sequence259:15932..16219(+)	partial			WP_002903482.1	glutamyl aminopeptidase	91.6	24.6	40.2
MGA_1146	LOCUS_08800	sequence259:16313..17023(+)	internal_stop_codon	16217..16219(+)		WP_048064463.1	M42 family metallopeptidase	91.9	63.7	34.8
MGA_1154	LOCUS_08860	sequence261:589..4074(-)	partial			WP_011948849.1	hypothetical protein	61.5	70.2	21.2
MGA_1162	LOCUS_08930	sequence262:3228..3668(+)	internal_stop_codon	3666..3668(+)		WP_011183117.1	protein phosphatase 2C domain-containing protein	97.9	55.9	38.6
MGA_1167	LOCUS_08960	sequence263:1491..2219(-)	internal_stop_codon	2439..2441(-),2241..2243(-)		WP_011166468.1	DUF31 family protein	99.2	35.9	46.7
MGA_1168	LOCUS_08970	sequence263:2439..2822(-)	internal_stop_codon	2439..2441(-),2826..2828(-),2241..2243(-)		WP_011166468.1	DUF31 family protein	97.6	18.4	45.6
MGA_1171	LOCUS_09000	sequence263:3902..4147(+)	partial			WP_010874718.1	methyltransferase	96.3	18.3	38.6
MGA_1175	LOCUS_09030	sequence264:2273..2710(-)	internal_stop_codon	2813..2815(-),2951..2953(-),2726..2728(-)		WP_011166856.1	tyrosine--tRNA ligase	97.2	34.1	32.2
MGA_1176	LOCUS_09040	sequence264:3014..3508(-)	internal_stop_codon	2813..2815(-),3014..3016(-),2951..2953(-),2726..2728(-)		WP_011183485.1	tyrosine--tRNA ligase	99.4	40.2	46.4
MGA_1186	LOCUS_09120	sequence266:309..572(+)	internal_stop_codon	570..572(+)		WP_011475561.1	fructose-specific PTS transporter subunit EIIC	94.3	12.6	32.9
MGA_1187	LOCUS_09130	sequence266:903..1745(+)	internal_stop_codon	1827..1829(+),2019..2021(+),1743..1745(+)		WP_010874435.1	fructose-specific PTS transporter subunit EIIC	99.6	38.9	44.2
MGA_1188	LOCUS_09140	sequence266:1854..2021(+)	internal_stop_codon	1827..1829(+),2019..2021(+),1743..1745(+)		WP_010922158.1	fructose-specific PTS transporter subunit EIIC	96.4	8.6	57.9
MGA_1204	LOCUS_09290	sequence268:3197..3397(-)	internal_stop_codon	3443..3445(-)		WP_011986743.1	peptide-methionine (R)-S-oxide reductase MsrB	98.5	43.6	73.8
MGA_1205	LOCUS_09300	sequence268:3443..3631(-)	internal_stop_codon	3443..3445(-)		WP_010875019.1	peptide-methionine (R)-S-oxide reductase MsrB	87.1	35.8	66.7
MGA_1208	LOCUS_09310	sequence269:188..415(-)	internal_stop_codon	188..190(-)		WP_011183569.1	tRNA lysidine(34) synthetase TilS	94.7	18.8	52.0
MGA_1210	LOCUS_09330	sequence269:988..2598(-)	partial			WP_014584390.1	AAA family ATPase	92.7	62.7	31.0
MGA_1215	LOCUS_09370	sequence270:815..1252(+)	internal_stop_codon	1250..1252(+)		WP_000370122.1	Tex family protein	100.0	20.1	44.8
MGA_1216	LOCUS_09380	sequence270:1298..2878(+)	internal_stop_codon	1250..1252(+)		WP_000370122.1	Tex family protein	98.9	73.2	44.1
MGA_1218	LOCUS_09400	sequence270:3345..4124(-)	internal_stop_codon	4158..4160(-)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.1	42.6	51.1
MGA_1219	LOCUS_09410	sequence270:4158..5177(-)	internal_stop_codon	4158..4160(-)		WP_011167160.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	98.2	53.3	49.0
MGA_1222	LOCUS_09440	sequence270:7913..8458(+)	internal_stop_codon	8456..8458(+)		WP_002936570.1	DNA-directed RNA polymerase subunit beta	81.2	11.8	34.7
MGA_1223	LOCUS_09450	sequence270:8756..9121(+)	internal_stop_codon	9119..9121(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	59.5	5.6	37.5
MGA_1224	LOCUS_09460	sequence270:9122..10336(+)	internal_stop_codon	10334..10336(+),9119..9121(+)		WP_011183496.1	DNA-directed RNA polymerase subunit beta	99.8	31.1	53.6
MGA_1225	LOCUS_09470	sequence270:10811..11281(+)	internal_stop_codon	11279..11281(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	99.4	12.0	74.2
MGA_1227	LOCUS_09490	sequence270:12468..12605(+)	internal_stop_codon	12603..12605(+)		WP_012869935.1	DNA-directed RNA polymerase subunit beta'	73.3	2.0	69.7
MGA_1228	LOCUS_09500	sequence270:12624..12902(+)	internal_stop_codon	12990..12992(+),12603..12605(+),12900..12902(+)		WP_011963311.1	DNA-directed RNA polymerase subunit beta'	98.9	6.3	63.7
MGA_1229	LOCUS_09510	sequence270:13050..13976(+)	internal_stop_codon	12990..12992(+),12900..12902(+),14241..14243(+)		WP_011074679.1	DNA-directed RNA polymerase subunit beta'	76.3	17.6	44.1
MGA_1231	LOCUS_09530	sequence270:14322..15083(+)	internal_stop_codon	14241..14243(+),15081..15083(+)		WP_000567939.1	DNA-directed RNA polymerase subunit beta'	97.6	19.2	54.8
MGA_1232	LOCUS_09540	sequence270:15444..15968(+)	partial			WP_010940189.1	DNA-directed RNA polymerase subunit beta'	77.6	9.6	41.2
MGA_1235	LOCUS_09570	sequence271:531..698(+)	partial			WP_003564756.1	30S ribosomal protein S16	90.9	57.1	71.2
MGA_1236	LOCUS_09580	sequence271:764..1057(+)	internal_stop_codon	1055..1057(+)		WP_011183438.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	99.0	39.5	42.7
MGA_1237	LOCUS_09590	sequence271:1187..1372(+)	internal_stop_codon	1388..1390(+),1055..1057(+),1370..1372(+)		WP_011016280.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	100.0	25.2	68.9
MGA_1252	LOCUS_09730	sequence273:913..1167(+)	internal_stop_codon	658..660(+),1165..1167(+)		WP_003242517.1	cyclic-di-AMP phosphodiesterase GdpP	98.8	12.4	42.2
MGA_1258	LOCUS_09790	sequence273:3090..3470(+)	internal_stop_codon	3039..3041(+)		WP_011182981.1	replicative DNA helicase	95.2	27.5	52.8
MGA_1260	LOCUS_09810	sequence274:223..717(+)	internal_stop_codon	190..192(+)		WP_003131091.1	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	91.5	64.3	38.3
MGA_1263	LOCUS_09840	sequence274:2106..2396(-)	frameshift,internal_stop_codon	2430..2432(-),2105..2107(-)	2312,2354	WP_011166600.1	Holliday junction resolvase RecU	93.8	64.6	33.7
MGA_1264	LOCUS_09850	sequence274:2602..3081(+)	internal_stop_codon	3079..3081(+),2596..2598(+)		WP_011861867.1	triose-phosphate isomerase	100.0	63.6	45.7
MGA_1269	LOCUS_09890	sequence275:1209..2114(+)	internal_stop_codon	2112..2114(+)		WP_011183059.1	amidase family protein	95.0	60.4	42.7
MGA_1270	LOCUS_09900	sequence275:2157..2531(+)	internal_stop_codon	2112..2114(+)		WP_011166930.1	amidase family protein	100.0	27.0	36.6
MGA_1278	LOCUS_09950	sequence277:2283..2654(+)	internal_stop_codon	2199..2201(+),2016..2018(+),2679..2681(+),2901..2903(+),2787..2789(+),2736..2738(+),2652..2654(+)		WP_205842899.1	DUF31 family protein	99.2	13.0	32.6
MGA_1287	LOCUS_10010	sequence279:1495..1959(+)	partial			WP_011016472.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	100.0	45.7	48.7
MGA_1288	LOCUS_10020	sequence279:2282..2830(+)	internal_stop_codon	2828..2830(+),2099..2101(+),2918..2920(+)		WP_011476297.1	NAD-dependent DNA ligase LigA	100.0	27.1	44.0
MGA_1298	LOCUS_10090	sequence281:327..620(-)	internal_stop_codon	810..812(-),636..638(-),129..131(-),327..329(-),792..794(-)		WP_011262282.1	PTS glucose transporter subunit IIBC	77.3	15.8	52.0
MGA_1299	LOCUS_10100	sequence281:1002..1622(-)	internal_stop_codon	810..812(-),984..986(-),1002..1004(-),975..977(-),792..794(-)		WP_011166334.1	PTS transporter subunit EIIC	97.6	37.7	34.6
MGA_1300	LOCUS_10110	sequence281:2123..2428(+)	internal_stop_codon	2426..2428(+)		WP_010963499.1	N-acetylmuramic acid 6-phosphate etherase	97.0	32.8	36.4
MGA_1301	LOCUS_10120	sequence281:2696..2983(+)	internal_stop_codon	2426..2428(+)		WP_002456966.1	N-acetylmuramic acid 6-phosphate etherase	93.7	30.2	38.2
MGA_1303	LOCUS_10140	sequence281:3591..4076(+)	internal_stop_codon	3582..3584(+)		WP_003021391.1	N-acetylglucosamine-6-phosphate deacetylase	95.0	40.1	41.9
MGA_1306	LOCUS_10170	sequence281:6668..6877(+)	internal_stop_codon	6659..6661(+)		WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	97.1	11.7	62.7
MGA_1312	LOCUS_10230	sequence281:9286..9936(-)	internal_stop_codon	10213..10215(-),10036..10038(-)		WP_000768163.1	isoleucine--tRNA ligase	79.6	17.7	33.5
MGA_1313	LOCUS_10240	sequence281:10213..10335(-)	internal_stop_codon	10213..10215(-),10399..10401(-),10036..10038(-),10507..10509(-),10531..10533(-),10576..10578(-),10396..10398(-)		WP_011166763.1	isoleucine--tRNA ligase	97.5	4.3	64.1
MGA_1314	LOCUS_10250	sequence281:10693..10974(-)	internal_stop_codon	11170..11172(-),10576..10578(-),11044..11046(-),10507..10509(-),10990..10992(-),10651..10653(-),10531..10533(-),10693..10695(-)		WP_011166763.1	isoleucine--tRNA ligase	97.8	10.6	51.5
MGA_1316	LOCUS_10270	sequence281:11323..11568(-)	internal_stop_codon	11170..11172(-),11788..11790(-),11599..11601(-),11323..11325(-),11611..11613(-)		WP_011124423.1	isoleucine--tRNA ligase	97.5	8.2	41.8
MGA_1320	LOCUS_10300	sequence282:1277..1681(+)	internal_stop_codon	1679..1681(+)		WP_011108937.1	alpha-amylase family glycosyl hydrolase	78.4	15.2	49.5
MGA_1326	LOCUS_10350	sequence283:2040..2591(-)	internal_stop_codon	2040..2042(-),2733..2735(-),2022..2024(-)		WP_000524657.1	redox-regulated ATPase YchF	99.5	49.7	41.5
MGA_1327	LOCUS_10360	sequence283:2733..2927(-)	internal_stop_codon	2733..2735(-)		WP_013096225.1	redox-regulated ATPase YchF	100.0	17.6	64.1
MGA_1332	LOCUS_10390	sequence284:1849..2583(-)	internal_stop_codon	2614..2616(-),2632..2634(-),1849..1851(-)		WP_011166468.1	DUF31 family protein	96.3	36.7	29.1
MGA_1338	LOCUS_10440	sequence286:268..699(-)	internal_stop_codon	748..750(-)		WP_011166415.1	Eco47II family restriction endonuclease	96.5	54.3	63.8
MGA_1339	LOCUS_10450	sequence286:748..1041(-)	internal_stop_codon	748..750(-)		WP_011166415.1	Eco47II family restriction endonuclease	99.0	37.8	68.8
MGA_1340	LOCUS_10460	sequence286:1154..1903(-)	internal_stop_codon	1910..1912(-),1154..1156(-)		WP_011166416.1	DNA cytosine methyltransferase	99.2	72.4	72.1
MGA_1341	LOCUS_10470	sequence286:1910..2044(-)	internal_stop_codon	1910..1912(-)		WP_011166416.1	DNA cytosine methyltransferase	90.9	11.7	65.0
MGA_1348	LOCUS_10540	sequence288:1099..1332(+)	internal_stop_codon	1330..1332(+)		WP_003405033.1	thymidine kinase	93.5	37.7	47.2
MGA_1349	LOCUS_10550	sequence288:1429..1674(+)	internal_stop_codon	1330..1332(+)		WP_010966171.1	thymidine kinase	95.1	43.1	39.3
MGA_1352	LOCUS_10580	sequence288:2477..2671(+)	internal_stop_codon	2669..2671(+),2720..2722(+),2672..2674(+)		WP_000148852.1	glucose-6-phosphate isomerase	96.9	13.8	50.0
MGA_1355	LOCUS_10590	sequence289:196..1377(-)	internal_stop_codon	1570..1572(-)		WP_011166794.1	F0F1 ATP synthase subunit beta	98.0	83.7	76.1
MGA_1356	LOCUS_10600	sequence289:1869..2771(-)	internal_stop_codon	1869..1871(-),2988..2990(-),1677..1679(-)		WP_011166795.1	ATP F0F1 synthase subunit alpha	100.0	58.3	69.3
MGA_1363	LOCUS_10640	sequence291:1..1781(+)	partial			WP_011183129.1	AAA family ATPase	100.0	61.0	30.1
MGA_1364	LOCUS_10650	sequence291:1923..2255(-)	partial			WP_001234836.1	16S rRNA pseudouridine(516) synthase RsuA	89.1	42.9	37.4
MGA_1366	LOCUS_10670	sequence292:231..470(+)	internal_stop_codon	468..470(+)		WP_002287130.1	ribonuclease J	100.0	14.1	44.3
MGA_1379	LOCUS_10800	sequence292:8114..8362(+)	internal_stop_codon	8360..8362(+)		WP_002356207.1	30S ribosomal protein S3	98.8	37.2	67.9
MGA_1385	LOCUS_10860	sequence292:9995..10219(+)	internal_stop_codon	10217..10219(+),10277..10279(+)		WP_000013542.1	50S ribosomal protein L5	97.3	40.0	56.9
MGA_1403	LOCUS_10990	sequence295:961..1608(-)	internal_stop_codon	961..963(-)		WP_003227570.1	arginine--tRNA ligase	100.0	37.4	40.7
MGA_1404	LOCUS_11000	sequence295:1699..2061(+)	internal_stop_codon	2059..2061(+),2176..2178(+),2236..2238(+)		WP_009895184.1	cysteine--tRNA ligase	99.2	25.6	39.5
MGA_1413	LOCUS_11070	sequence296:2409..2753(-)	partial			WP_003640703.1	translation elongation factor 4	99.1	18.5	61.1
MGA_1426	LOCUS_11170	sequence299:1971..2252(-)	internal_stop_codon	1971..1973(-),2280..2282(-),1860..1862(-)		WP_003722753.1	lipoate protein ligase LplA1	98.9	27.8	51.1
MGA_1427	LOCUS_11180	sequence299:2280..2564(-)	internal_stop_codon	2280..2282(-)		WP_004453953.1	lipoate--protein ligase	94.7	28.7	43.8
MGA_1431	LOCUS_11210	sequence300:1358..1675(+)	internal_stop_codon	1673..1675(+),1811..1813(+)		WP_013447978.1	potassium transporter TrkG	89.5	17.6	39.4
MGA_1432	LOCUS_11220	sequence300:1885..2541(+)	partial			WP_010869633.1	potassium channel protein MjK1	90.8	61.9	29.6
MGA_1435	LOCUS_11240	sequence301:523..867(-)	internal_stop_codon	1006..1008(-),928..930(-),916..918(-)		WP_002899531.1	ATP-binding cassette domain-containing protein	79.8	16.9	56.0
MGA_1436	LOCUS_11250	sequence301:1006..1212(-)	partial			WP_048066010.1	ABC transporter ATP-binding protein	86.8	22.3	42.4
MGA_1437	LOCUS_11260	sequence301:1216..1392(-)	internal_stop_codon	1216..1218(-),1006..1008(-),1564..1566(-),1423..1425(-)		WP_041168847.1	ATP-binding cassette domain-containing protein	96.6	10.2	75.0
MGA_1438	LOCUS_11270	sequence301:1564..1686(-)	internal_stop_codon	1564..1566(-),1423..1425(-),1756..1758(-),1696..1698(-)		WP_041272056.1	ATP-binding cassette domain-containing protein	100.0	7.5	80.0
MGA_1439	LOCUS_11280	sequence301:1756..2142(-)	internal_stop_codon	1564..1566(-),1756..1758(-),1696..1698(-)		WP_010905087.1	ATP-binding cassette domain-containing protein	100.0	23.5	57.8
MGA_1445	LOCUS_11330	sequence303:645..1379(+)	partial			WP_002656583.1	replicative DNA helicase	98.8	52.7	28.4