{
    "type": "genome",
    "identifier": "GCF_006569185.2",
    "organism": "Litorilinea aerophila",
    "title": "Litorilinea aerophila",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "maclea_lab",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_006569185.2",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN12147507",
        "wgs_master": "VIGC00000000.2",
        "refseq_category": "reference genome",
        "taxid": "1204385",
        "species_taxid": "1204385",
        "organism_name": "Litorilinea aerophila",
        "infraspecific_name": "strain=ATCC BAA-2444",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/11/20",
        "asm_name": "ASM656918v2",
        "asm_submitter": "maclea_lab",
        "gbrs_paired_asm": "GCA_006569185.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/569/185/GCF_006569185.2_ASM656918v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6043010",
        "genome_size_ungapped": "6043010",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "93",
        "contig_count": "93",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_006569185.2-RS_2024_12_09",
        "annotation_date": "2024-12-09",
        "total_gene_count": "4744",
        "protein_coding_gene_count": "4637",
        "non_coding_gene_count": "54",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-11-20",
    "dateModified": "2021-11-20",
    "datePublished": "2021-11-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Litorilinea aerophila"
        ],
        "sample_taxid": [
            "1204385"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Iceland: Reykjanes peninsula, Isafjardardjup"
        ],
        "sample_host_location_id": [],
        "data_size": "1.675 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6043010",
        "Number of Sequences": "93",
        "Longest Sequences (bp)": "341248",
        "N50 (bp)": "180513",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.6",
        "Number of CDSs": "4685",
        "Average Protein Length": "372.3",
        "Coding Ratio (%)": "86.6",
        "Number of rRNAs": "3",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "9"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_000281175.1",
                "taxid": 133453,
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                "relation_to_type": "type",
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                "ani": 76.6077,
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                "total_fragments": 1970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aggregatilinea lenta",
                "strain": "strain=MO-CFX2",
                "accession": "GCA_003569045.1",
                "taxid": 913108,
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                "ani": 75.5837,
                "matched_fragments": 60,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Thermaerobacter subterraneus",
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                "accession": "GCA_000183545.3",
                "taxid": 175696,
                "species_taxid": 175696,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3168,
                "matched_fragments": 106,
                "total_fragments": 1970,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus ficus",
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                "accession": "GCA_003444775.1",
                "taxid": 317577,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1983,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stigmatella erecta",
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                "accession": "GCA_900111745.1",
                "taxid": 83460,
                "species_taxid": 83460,
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                "validated": true,
                "ani": 75.137,
                "matched_fragments": 131,
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            },
            {
                "organism_name": "Roseomonas harenae",
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                "accession": "GCA_009848505.1",
                "taxid": 2692566,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stigmatella aurantiaca",
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            {
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                "accession": "GCA_003149515.1",
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                "matched_fragments": 52,
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            },
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                "organism_name": "Actinomadura darangshiensis",
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                "organism_name": "Hymenobacter caeli",
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            {
                "organism_name": "Methylobacterium platani",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Alcanivorax gelatiniphagus",
                "strain": "strain=MEBiC 08158",
                "accession": "GCA_005938655.1",
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            {
                "organism_name": "Actinomadura montaniterrae",
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            },
            {
                "accession": "GCA_002068935.1",
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            },
            {
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            },
            {
                "accession": "GCA_014237545.1",
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            },
            {
                "accession": "GCA_002329325.1",
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}