{ "tc_result": [ { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=DSM 24789", "accession": "GCA_006716585.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1262, "total_fragments": 1263, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=NBRC 15030", "accession": "GCA_007990815.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 99.8647, "matched_fragments": 1099, "total_fragments": 1263, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=ATCC 35035", "accession": "GCA_002217205.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 99.8521, "matched_fragments": 1066, "total_fragments": 1263, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium crassostreae", "strain": "strain=LPB0076", "accession": "GCA_001831475.1", "taxid": 1763534, "species_taxid": 1763534, "relation_to_type": "type", "validated": true, "ani": 78.3851, "matched_fragments": 146, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium cellulosilyticum", "strain": "strain=AR-3-4", "accession": "GCA_004349355.1", "taxid": 2541731, "species_taxid": 2541731, "relation_to_type": "type", "validated": true, "ani": 77.559, "matched_fragments": 181, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium franklandianum", "strain": "strain=LB3P56", "accession": "GCA_007097365.1", "taxid": 2594430, "species_taxid": 2594430, "relation_to_type": "type", "validated": true, "ani": 77.4382, "matched_fragments": 211, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium gawalongense", "strain": "strain=GSP16", "accession": "GCA_007097265.1", "taxid": 2594432, "species_taxid": 2594432, "relation_to_type": "type", "validated": true, "ani": 77.3995, "matched_fragments": 199, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium macrobrachii", "strain": "strain=an-8", "accession": "GCA_014486675.1", "taxid": 591204, "species_taxid": 591204, "relation_to_type": "type", "validated": true, "ani": 77.3757, "matched_fragments": 175, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium channae", "strain": "strain=KSM-R2A30", "accession": "GCA_021172165.1", "taxid": 2897181, "species_taxid": 2897181, "relation_to_type": "type", "validated": true, "ani": 77.3697, "matched_fragments": 136, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium daejeonense", "strain": "strain=DSM 17708", "accession": "GCA_000425425.1", "taxid": 350893, "species_taxid": 350893, "relation_to_type": "type", "validated": true, "ani": 77.347, "matched_fragments": 160, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium proteolyticum", "strain": "strain=1Y8A", "accession": "GCA_015223105.1", "taxid": 2911683, "species_taxid": 2911683, "relation_to_type": "type", "validated": true, "ani": 77.3163, "matched_fragments": 134, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium soyae", "strain": "strain=SCIV07", "accession": "GCA_021245985.1", "taxid": 2903098, "species_taxid": 2903098, "relation_to_type": "type", "validated": true, "ani": 77.3042, "matched_fragments": 163, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium dankookense", "strain": "strain=DSM 25687", "accession": "GCA_004362665.1", "taxid": 706186, "species_taxid": 706186, "relation_to_type": "type", "validated": true, "ani": 77.2292, "matched_fragments": 190, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium oncorhynchi", "strain": "strain=CCUG 59446", "accession": "GCA_002217355.1", "taxid": 728056, "species_taxid": 728056, "relation_to_type": "type", "validated": true, "ani": 77.2287, "matched_fragments": 185, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium luteum", "strain": "strain=NBRC 112527", "accession": "GCA_008806775.1", "taxid": 2026654, "species_taxid": 2026654, "relation_to_type": "type", "validated": true, "ani": 77.1997, "matched_fragments": 199, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium ichthyis", "strain": "strain=NST-5", "accession": "GCA_009915155.1", "taxid": 2698827, "species_taxid": 2698827, "relation_to_type": "type", "validated": true, "ani": 77.0599, "matched_fragments": 147, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium sediminilitoris", "strain": "strain=YSM-43", "accession": "GCA_023008245.1", "taxid": 2024526, "species_taxid": 2024526, "relation_to_type": "type", "validated": true, "ani": 77.0297, "matched_fragments": 140, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium columnare", "strain": "strain=ATCC 23463", "accession": "GCA_002530675.1", "taxid": 996, "species_taxid": 996, "relation_to_type": "type", "validated": true, "ani": 76.4595, "matched_fragments": 114, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium columnare", "strain": "strain=NBRC 100251", "accession": "GCA_007990835.1", "taxid": 996, "species_taxid": 996, "relation_to_type": "type", "validated": true, "ani": 76.4388, "matched_fragments": 111, "total_fragments": 1263, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002217205.1", "gtdb_species": "s__Flavobacterium branchiophilum", "ani": 99.8521, "matched_fragments": 1066, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "97.23", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.84", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_001831475.1", "gtdb_species": "s__Flavobacterium crassostreae", "ani": 78.2964, "matched_fragments": 146, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015182285.1", "gtdb_species": "s__Flavobacterium sp015182285", "ani": 77.6107, "matched_fragments": 166, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018069925.1", "gtdb_species": "s__Flavobacterium sp018069925", "ani": 77.5668, "matched_fragments": 154, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", 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"total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903824755.1", "gtdb_species": "s__Flavobacterium sp903824755", "ani": 76.6107, "matched_fragments": 145, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002530675.1", "gtdb_species": "s__Flavobacterium columnare", "ani": 76.4595, "matched_fragments": 114, "total_fragments": 1263, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.33", "min_intra_species_ani": "99.02", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 39, "status": "-" } ] }