{
    "type": "genome",
    "identifier": "GCF_006861795.1",
    "organism": "Psychrobacillus lasiicapitis",
    "title": "Psychrobacillus lasiicapitis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Granada",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_006861795.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN11897261",
        "wgs_master": "VDGH00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1636719",
        "species_taxid": "1636719",
        "organism_name": "Psychrobacillus lasiicapitis",
        "infraspecific_name": "strain=NEAU-3TGS17",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/07/10",
        "asm_name": "ASM686179v1",
        "asm_submitter": "University of Granada",
        "gbrs_paired_asm": "GCA_006861795.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/861/795/GCF_006861795.1_ASM686179v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4488252",
        "genome_size_ungapped": "4488222",
        "gc_percent": "37.000000",
        "replicon_count": "0",
        "scaffold_count": "28",
        "contig_count": "28",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_006861795.1-RS_2024_04_27",
        "annotation_date": "2024-04-27",
        "total_gene_count": "4557",
        "protein_coding_gene_count": "4387",
        "non_coding_gene_count": "111",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-07-10",
    "dateModified": "2019-07-10",
    "datePublished": "2019-07-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Psychrobacillus lasiicapitis"
        ],
        "sample_taxid": [
            "1636719"
        ],
        "sample_host_organism": [
            "Lasius fuliginosus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Harbin, Heilongjiang"
        ],
        "sample_host_location_id": [],
        "data_size": "1.270 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4488252",
        "Number of Sequences": "28",
        "Longest Sequences (bp)": "582181",
        "N50 (bp)": "313778",
        "Gap Ratio (%)": "0.001092",
        "GCcontent (%)": "37.1",
        "Number of CDSs": "4483",
        "Average Protein Length": "282.6",
        "Coding Ratio (%)": "84.7",
        "Number of rRNAs": "8",
        "Number of tRNAs": "87",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Psychrobacillus lasiicapitis",
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                "relation_to_type": "type",
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                "total_fragments": 1482,
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            },
            {
                "organism_name": "Psychrobacillus lasiicapitis",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_006861775.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus vulpis",
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                "taxid": 2325572,
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                "relation_to_type": "type",
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                "ani": 80.648,
                "matched_fragments": 641,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus glaciei",
                "strain": "strain=PB01",
                "accession": "GCA_008973485.1",
                "taxid": 2283160,
                "species_taxid": 2283160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.7464,
                "matched_fragments": 573,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus psychrotolerans",
                "strain": "strain=DSM 11706",
                "accession": "GCA_900115805.1",
                "taxid": 126156,
                "species_taxid": 126156,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.4636,
                "matched_fragments": 483,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenisporosarcina antarctica",
                "strain": "strain=CGMCC 1.6503",
                "accession": "GCA_004367585.1",
                "taxid": 417367,
                "species_taxid": 417367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6526,
                "matched_fragments": 158,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rossellomorea arthrocnemi",
                "strain": "strain=EAR8",
                "accession": "GCA_904424705.1",
                "taxid": 2769542,
                "species_taxid": 2769542,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1298,
                "matched_fragments": 51,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sutcliffiella halmapala",
                "strain": "strain=DSM 8723",
                "accession": "GCA_002019665.1",
                "taxid": 79882,
                "species_taxid": 79882,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6423,
                "matched_fragments": 78,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacillus suaedaesalsae",
                "strain": "strain=RD4P76",
                "accession": "GCA_016890225.1",
                "taxid": 2810349,
                "species_taxid": 2810349,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4604,
                "matched_fragments": 81,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_006861795.1",
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                "total_fragments": 1482,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Psychrobacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_900111345.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
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                "mean_intra_species_ani": "N/A",
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            },
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                "accession": "GCF_007676755.1",
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                "mean_intra_species_ani": "N/A",
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            },
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            },
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_900103605.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": -0.233,
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        "bacillus_cell_shape": null,
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    "_genome_taxon": [
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        "lasiicapitis"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}