{ "tc_result": [ { "organism_name": "Shewanella eurypsychrophilus", "strain": "strain=YLB-08", "accession": "GCA_007004545.3", "taxid": 2593656, "species_taxid": 2593656, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1947, "total_fragments": 1950, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Shewanella psychrophila", "strain": "strain=WP2", "accession": "GCA_002005305.1", "taxid": 225848, "species_taxid": 225848, "relation_to_type": "type", "validated": true, "ani": 82.8594, "matched_fragments": 1099, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella benthica", "strain": "strain=DSM 8812", "accession": "GCA_015069875.1", "taxid": 43661, "species_taxid": 43661, "relation_to_type": "type", "validated": true, "ani": 82.6055, "matched_fragments": 810, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella psychropiezotolerans", "strain": "strain=YLB-06", "accession": "GCA_007197555.1", "taxid": 2593655, "species_taxid": 2593655, "relation_to_type": "type", "validated": true, "ani": 82.3326, "matched_fragments": 1121, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella violacea", "strain": "strain=DSS12", "accession": "GCA_000091325.1", "taxid": 60217, "species_taxid": 60217, "relation_to_type": "type", "validated": true, "ani": 81.3129, "matched_fragments": 866, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella canadensis", "strain": "strain=HAW-EB2", "accession": "GCA_003966225.1", "taxid": 271096, "species_taxid": 271096, "relation_to_type": "type", "validated": true, "ani": 80.3943, "matched_fragments": 674, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella atlantica", "strain": "strain=HAW-EB5", "accession": "GCA_003966265.1", "taxid": 271099, "species_taxid": 271099, "relation_to_type": "type", "validated": true, "ani": 80.0148, "matched_fragments": 635, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella abyssi", "strain": "strain=DSM 17171", "accession": "GCA_023284025.1", "taxid": 311789, "species_taxid": 311789, "relation_to_type": "type", "validated": true, "ani": 79.411, "matched_fragments": 392, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella gelidimarina", "strain": "strain=ATCC 700752", "accession": "GCA_023283945.1", "taxid": 56813, "species_taxid": 56813, "relation_to_type": "type", "validated": true, "ani": 79.0918, "matched_fragments": 396, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella kaireitica", "strain": "strain=DSM 17170", "accession": "GCA_023284045.1", "taxid": 212021, "species_taxid": 212021, "relation_to_type": "type", "validated": true, "ani": 78.6002, "matched_fragments": 396, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella ulleungensis", "strain": "strain=KCTC 62130", "accession": "GCA_023283965.1", "taxid": 2282699, "species_taxid": 2282699, "relation_to_type": "type", "validated": true, "ani": 77.8569, "matched_fragments": 182, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella basaltis", "strain": "strain=KCTC 22121", "accession": "GCA_023283885.1", "taxid": 472183, "species_taxid": 472183, "relation_to_type": "type", "validated": true, "ani": 77.6588, "matched_fragments": 177, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella corallii", "strain": "strain=DSM 21332", "accession": "GCA_023349125.1", "taxid": 560080, "species_taxid": 560080, "relation_to_type": "type", "validated": true, "ani": 77.5912, "matched_fragments": 142, "total_fragments": 1950, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_007004545.2", "gtdb_species": "s__Shewanella sp007004545", "ani": 99.9546, "matched_fragments": 1911, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_002005305.1", "gtdb_species": "s__Shewanella psychrophila", "ani": 82.8534, "matched_fragments": 1099, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015069875.1", "gtdb_species": "s__Shewanella benthica", "ani": 82.5876, "matched_fragments": 814, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.81", "min_intra_species_ani": "96.81", "mean_intra_species_af": "0.66", "min_intra_species_af": "0.66", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007197555.1", "gtdb_species": "s__Shewanella sp007197555", "ani": 82.3432, "matched_fragments": 1118, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.43", "min_intra_species_ani": "99.43", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000172075.1", "gtdb_species": "s__Shewanella benthica_A", "ani": 81.5466, "matched_fragments": 856, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.25", "min_intra_species_ani": "96.25", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000091325.1", "gtdb_species": "s__Shewanella violacea", "ani": 81.3252, "matched_fragments": 867, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001957125.1", "gtdb_species": "s__Shewanella sp001957125", "ani": 81.2509, "matched_fragments": 1070, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013214165.1", "gtdb_species": "s__Shewanella sp013214165", "ani": 81.1366, "matched_fragments": 784, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003966225.1", "gtdb_species": "s__Shewanella canadensis", "ani": 80.4047, "matched_fragments": 670, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003966265.1", "gtdb_species": "s__Shewanella atlantica", "ani": 80.0082, "matched_fragments": 632, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000014885.1", "gtdb_species": "s__Shewanella piezotolerans", "ani": 79.6148, "matched_fragments": 386, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000018285.1", "gtdb_species": "s__Shewanella pealeana", "ani": 79.3809, "matched_fragments": 420, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003605125.1", "gtdb_species": "s__Shewanella algidipiscicola", "ani": 78.5543, "matched_fragments": 334, "total_fragments": 1950, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Shewanella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.64", "min_intra_species_ani": "98.64", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" } ] }