{ "type": "genome", "identifier": "GCF_007362775.1", "organism": "Microlunatus elymi", "title": "Microlunatus elymi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyungpook National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007362775.1", "bioproject": "PRJNA224116", "biosample": "SAMN12282882", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2596828", "species_taxid": "2596828", "organism_name": "Microlunatus elymi", "infraspecific_name": "strain=KUDC0627", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/07/24", "asm_name": "ASM736277v1", "asm_submitter": "Kyungpook National University", "gbrs_paired_asm": "GCA_007362775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/362/775/GCF_007362775.1_ASM736277v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5121194", "genome_size_ungapped": "5121194", "gc_percent": "67.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007362775.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "4758", "protein_coding_gene_count": "4640", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-07-24", "dateModified": "2019-07-24", "datePublished": "2019-07-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Microlunatus elymi" ], "sample_taxid": [ "2596828" ], "sample_host_organism": [ "Campeiostachys tsukushiensis" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "1.388 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5121194", "Number of Sequences": "1", "Longest Sequences (bp)": "5121194", "N50 (bp)": "5121194", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "66.9", "Number of CDSs": "4770", "Average Protein Length": "321.3", "Coding Ratio (%)": "89.8", "Number of rRNAs": "3", "Number of tRNAs": "56", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Microlunatus elymi", "strain": "strain=KUDC0627", "accession": "GCA_007362775.1", "taxid": 2596828, "species_taxid": 2596828, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1707, "total_fragments": 1707, 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}, { "organism_name": "Microlunatus parietis", "strain": "strain=DSM 22083", "accession": "GCA_013407955.1", "taxid": 682979, "species_taxid": 682979, "relation_to_type": "type", "validated": true, "ani": 78.4682, "matched_fragments": 642, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microlunatus panaciterrae", "strain": "strain=DSM 18662", "accession": "GCA_016907535.1", "taxid": 400768, "species_taxid": 400768, "relation_to_type": "type", "validated": true, "ani": 78.3096, "matched_fragments": 443, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Auraticoccus monumenti", "strain": "strain=MON 2.2", "accession": "GCA_900101785.1", "taxid": 675864, "species_taxid": 675864, "relation_to_type": "type", "validated": true, "ani": 77.732, "matched_fragments": 403, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Granulicoccus phenolivorans", "strain": "strain=NBRC 107789", "accession": "GCA_001552335.1", "taxid": 266854, "species_taxid": 266854, "relation_to_type": "type", "validated": true, "ani": 77.6964, "matched_fragments": 279, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microlunatus antarcticus", "strain": "strain=DSM 11053", "accession": "GCA_014193425.1", "taxid": 53388, "species_taxid": 53388, "relation_to_type": "type", "validated": true, "ani": 77.6784, "matched_fragments": 366, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Granulicoccus phenolivorans", "strain": "strain=DSM 17626", "accession": "GCA_000423085.1", "taxid": 266854, "species_taxid": 266854, "relation_to_type": "type", "validated": true, "ani": 77.6524, "matched_fragments": 272, "total_fragments": 1707, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propioniciclava coleopterorum", "strain": "strain=HDW11", "accession": 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