{ "type": "genome", "identifier": "GCF_007741495.1", "organism": "Roseimaritima multifibrata", "title": "Roseimaritima multifibrata", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007741495.1", "bioproject": "PRJNA224116", "biosample": "SAMN06143214", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1930274", "species_taxid": "1930274", "organism_name": "Roseimaritima multifibrata", "infraspecific_name": "strain=FF011L", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/07/31", "asm_name": "ASM774149v1", "asm_submitter": "Leibniz-Institute DSMZ German Collection of Microorganisms and Cell Cultures", "gbrs_paired_asm": "GCA_007741495.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/741/495/GCF_007741495.1_ASM774149v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7216590", "genome_size_ungapped": "7216590", "gc_percent": "54.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007741495.1-RS_2024_10_11", "annotation_date": "2024-10-11", "total_gene_count": "5248", "protein_coding_gene_count": "5167", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-07-31", "dateModified": "2019-07-31", "datePublished": "2019-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Roseimaritima multifibrata" ], "sample_taxid": [ "1930274" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany:Helgoland" ], "sample_host_location_id": [], "data_size": "2.032 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7216590", "Number of Sequences": "1", "Longest Sequences (bp)": "7216590", "N50 (bp)": "7216590", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.5", "Number of CDSs": "5285", "Average Protein Length": "377.3", "Coding Ratio (%)": "82.9", "Number of rRNAs": "6", "Number of tRNAs": "44", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Roseimaritima multifibrata", "strain": "strain=FF011L", "accession": "GCA_007741495.1", "taxid": 1930274, "species_taxid": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseimaritima sediminicola", "strain": "strain=JC651", "accession": "GCA_009618275.1", "taxid": 2662066, "species_taxid": 2662066, "relation_to_type": "type", "validated": true, "ani": 76.5109, "matched_fragments": 245, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodopirellula aestuarii", "strain": "strain=ICT_H3.1", "accession": "GCA_023701485.1", "taxid": 2950107, "species_taxid": 2950107, "relation_to_type": "type", "validated": true, "ani": 76.3444, "matched_fragments": 97, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubripirellula reticaptiva", "strain": "strain=Poly59", "accession": "GCA_007860175.1", "taxid": 2528013, "species_taxid": 2528013, "relation_to_type": "type", "validated": true, "ani": 76.2589, "matched_fragments": 111, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodopirellula maiorica", "strain": "strain=SM1", "accession": "GCA_000346295.1", "taxid": 1265734, "species_taxid": 1265734, "relation_to_type": "type", "validated": true, "ani": 76.2186, "matched_fragments": 112, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseiconus nitratireducens", "strain": "strain=JC645", "accession": "GCA_008629675.1", "taxid": 2605748, "species_taxid": 2605748, "relation_to_type": "type", "validated": true, "ani": 76.0614, "matched_fragments": 95, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crateriforma conspicua", "strain": "strain=Mal65", "accession": "GCA_007752935.1", "taxid": 2527996, "species_taxid": 2527996, "relation_to_type": "type", "validated": true, "ani": 76.0429, "matched_fragments": 91, "total_fragments": 2405, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crateriforma spongiae", "strain": 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