{ "type": "genome", "identifier": "GCF_007827555.1", "organism": "Aeribacillus composti", "title": "Aeribacillus composti", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007827555.1", "bioproject": "PRJNA224116", "biosample": "SAMN11512289", "wgs_master": "VISS00000000.1", "refseq_category": "na", "taxid": "1868734", "species_taxid": "1868734", "organism_name": "Aeribacillus composti", "infraspecific_name": "strain=KCTC 33824", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/02", "asm_name": "ASM782755v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_007827555.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/827/555/GCF_007827555.1_ASM782755v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3777782", "genome_size_ungapped": "3777386", "gc_percent": "39.000000", "replicon_count": "0", "scaffold_count": "78", "contig_count": "78", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007827555.1-RS_2024_04_05", "annotation_date": "2024-04-05", "total_gene_count": "3689", "protein_coding_gene_count": "3483", "non_coding_gene_count": "79", "pubmed_id": "26203337" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-02", "dateModified": "2019-08-02", "datePublished": "2019-08-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Aeribacillus composti" ], "sample_taxid": [ "1868734" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.071 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 98.96, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3777782", "Number of Sequences": "78", "Longest Sequences (bp)": "217035", "N50 (bp)": "94665", "Gap Ratio (%)": "0.010482", "GCcontent (%)": "38.8", "Number of CDSs": "3672", "Average Protein Length": "277.9", "Coding Ratio (%)": "81.0", "Number of rRNAs": "3", "Number of tRNAs": "66", "Number of CRISPRs": "13" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aeribacillus composti", "strain": "strain=KCTC 33824", "accession": "GCA_007827555.1", "taxid": 1868734, "species_taxid": 1868734, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1212, "total_fragments": 1218, 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