{ "type": "genome", "identifier": "GCF_007830115.1", "organism": "Aerolutibacter ruishenii", "title": "Aerolutibacter ruishenii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007830115.1", "bioproject": "PRJNA224116", "biosample": "SAMN02927904", "wgs_master": "VLKP00000000.1", "refseq_category": "reference genome", "taxid": "686800", "species_taxid": "686800", "organism_name": "Aerolutibacter ruishenii", "infraspecific_name": "strain=CGMCC 1.10136", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/02", "asm_name": "ASM783011v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_007830115.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/830/115/GCF_007830115.1_ASM783011v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3359359", "genome_size_ungapped": "3359349", "gc_percent": "67.500000", "replicon_count": "0", "scaffold_count": "28", "contig_count": "28", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007830115.1-RS_2024_05_06", "annotation_date": "2024-05-06", "total_gene_count": "3133", "protein_coding_gene_count": "3019", "non_coding_gene_count": "59", "pubmed_id": "26203337" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-02", "dateModified": "2019-08-02", "datePublished": "2019-08-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Aerolutibacter ruishenii" ], "sample_taxid": [ "686800" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"Lysobacter panacisoli", "strain": "strain=JCM 19212", "accession": "GCA_009765165.1", "taxid": 1255263, "species_taxid": 1255263, "relation_to_type": "type", "validated": true, "ani": 82.2363, "matched_fragments": 641, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter arenosi", "strain": "strain=R7", "accession": "GCA_016613475.2", "taxid": 2795387, "species_taxid": 2795387, "relation_to_type": "type", "validated": true, "ani": 82.204, "matched_fragments": 624, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter psychrotolerans", "strain": "strain=ZS60", "accession": "GCA_003719825.1", "taxid": 1327343, "species_taxid": 1327343, "relation_to_type": "type", "validated": true, "ani": 81.9102, "matched_fragments": 604, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter enzymogenes", "strain": "strain=ATCC 29487", 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2912247, "relation_to_type": "type", "validated": true, "ani": 81.4419, "matched_fragments": 592, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter capsici", "strain": "strain=VKM B-2533", "accession": "GCA_014779555.2", "taxid": 435897, "species_taxid": 435897, "relation_to_type": "type", "validated": true, "ani": 81.3896, "matched_fragments": 619, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas aquatica", "strain": "strain=RIB1-20", "accession": "GCA_022662575.1", "taxid": 450364, "species_taxid": 450364, "relation_to_type": "type", "validated": true, "ani": 81.375, "matched_fragments": 580, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas fusca", "strain": "strain=DSM 15424", "accession": "GCA_000423885.1", "taxid": 215690, "species_taxid": 215690, "relation_to_type": "type", "validated": true, "ani": 81.2732, "matched_fragments": 565, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas arsenica", "strain": "strain=26-35", "accession": "GCA_004352825.1", "taxid": 1586242, "species_taxid": 1586242, "relation_to_type": "type", "validated": true, "ani": 81.0971, "matched_fragments": 546, "total_fragments": 1107, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_007830115.1", "gtdb_species": "s__Lysobacter ruishenii", "ani": 100.0, "matched_fragments": 1105, "total_fragments": 1107, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, 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