{ "type": "genome", "identifier": "GCF_007833165.1", "organism": "Caenimonas sedimenti", "title": "Caenimonas sedimenti", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nanjing Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007833165.1", "bioproject": "PRJNA224116", "biosample": "SAMN12273551", "wgs_master": "VOBQ00000000.1", "refseq_category": "reference genome", "taxid": "2596921", "species_taxid": "2596921", "organism_name": "Caenimonas sedimenti", "infraspecific_name": "strain=HX-9-20", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/04", "asm_name": "ASM783316v1", "asm_submitter": "Nanjing Agricultural University", "gbrs_paired_asm": "GCA_007833165.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/833/165/GCF_007833165.1_ASM783316v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5910442", "genome_size_ungapped": "5910442", "gc_percent": "67.500000", "replicon_count": "0", "scaffold_count": "51", "contig_count": "51", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007833165.1-RS_2024_06_10", "annotation_date": "2024-06-10", "total_gene_count": "5776", "protein_coding_gene_count": "5677", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-04", "dateModified": "2019-08-04", "datePublished": "2019-08-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Caenimonas sedimenti" ], "sample_taxid": [ "2596921" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Ramlibacter alkalitolerans", "strain": "strain=KACC 19305", "accession": "GCA_016722765.1", "taxid": 2039631, "species_taxid": 2039631, "relation_to_type": "type", "validated": true, "ani": 81.9937, "matched_fragments": 941, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter henchirensis", "strain": "strain=DSM 14656", "accession": "GCA_004682015.1", "taxid": 204072, "species_taxid": 204072, "relation_to_type": "type", "validated": true, "ani": 81.6348, "matched_fragments": 850, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter pinisoli", "strain": "strain=MAH-25", "accession": "GCA_009758015.1", "taxid": 2682844, "species_taxid": 2682844, "relation_to_type": "type", "validated": true, "ani": 81.5909, "matched_fragments": 936, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter aquaticus", "strain": "strain=LMG 30558", "accession": "GCA_015159745.1", "taxid": 2780094, "species_taxid": 2780094, "relation_to_type": "type", "validated": true, "ani": 81.5871, "matched_fragments": 717, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter algicola", "strain": "strain=CrO1", "accession": "GCA_016641735.1", "taxid": 2795217, "species_taxid": 2795217, "relation_to_type": "type", "validated": true, "ani": 81.5254, "matched_fragments": 813, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter rhizophilus", "strain": "strain=CCTCC AB2015357", "accession": "GCA_004681965.1", "taxid": 1781167, "species_taxid": 1781167, "relation_to_type": "type", "validated": true, "ani": 80.84, "matched_fragments": 762, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter lithotrophicus", "strain": "strain=RBP-1", "accession": "GCA_012184415.1", "taxid": 2606681, "species_taxid": 2606681, "relation_to_type": "type", "validated": true, "ani": 80.7736, "matched_fragments": 830, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caenimonas koreensis", "strain": "strain=EMB320", "accession": "GCA_009646335.1", "taxid": 367474, "species_taxid": 367474, "relation_to_type": "type", "validated": true, "ani": 79.8243, "matched_fragments": 670, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylophilus ampelinus", "strain": "strain=CFBP 1192", "accession": "GCA_024832295.1", "taxid": 54067, "species_taxid": 54067, "relation_to_type": "type", "validated": true, "ani": 79.6938, "matched_fragments": 552, "total_fragments": 1946, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Melaminivora alkalimesophila", "strain": "strain=CY1", "accession": "GCA_000282995.1", "taxid": 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