{ "type": "genome", "identifier": "GCF_007856155.1", "organism": "Streptomyces qinzhouensis", "title": "Streptomyces qinzhouensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Hunan university of science and technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007856155.1", "bioproject": "PRJNA224116", "biosample": "SAMN12389286", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2599401", "species_taxid": "2599401", "organism_name": "Streptomyces qinzhouensis", "infraspecific_name": "strain=SSL-25", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/06", "asm_name": "ASM785615v1", "asm_submitter": "Hunan university of science and technology", "gbrs_paired_asm": "GCA_007856155.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/856/155/GCF_007856155.1_ASM785615v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8146484", "genome_size_ungapped": "8146484", "gc_percent": "71.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007856155.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "6667", "protein_coding_gene_count": "6475", "non_coding_gene_count": "89", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-06", "dateModified": "2019-08-06", "datePublished": "2019-08-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces qinzhouensis" ], "sample_taxid": [ "2599401" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Soil" ], "sample_host_location_id": [], "data_size": "2.172 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "8146484", "Number of Sequences": "1", "Longest Sequences (bp)": "8146484", "N50 (bp)": "8146484", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "71.5", "Number of CDSs": "6845", "Average Protein Length": "345.7", "Coding Ratio (%)": "87.1", "Number of rRNAs": "18", "Number of tRNAs": "95", "Number of CRISPRs": "5" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces qinzhouensis", "strain": "strain=SSL-25", "accession": "GCA_007856155.1", "taxid": 2599401, "species_taxid": 2599401, 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"status": "below_threshold" }, { "organism_name": "Streptomyces genisteinicus", "strain": "strain=CRPJ-33", "accession": "GCA_014489615.1", "taxid": 2768068, "species_taxid": 2768068, "relation_to_type": "type", "validated": true, "ani": 81.48, "matched_fragments": 1379, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces roseicoloratus", "strain": "strain=TRM44457", "accession": "GCA_004117935.1", "taxid": 2508722, "species_taxid": 2508722, "relation_to_type": "type", "validated": true, "ani": 81.4758, "matched_fragments": 1211, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces melanogenes", "strain": "strain=JCM 4398", "accession": "GCA_014649795.1", "taxid": 67326, "species_taxid": 67326, "relation_to_type": "type", "validated": true, "ani": 81.3065, "matched_fragments": 1281, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces somaliensis", "strain": "strain=DSM 40738", "accession": "GCA_024349285.1", "taxid": 78355, "species_taxid": 78355, "relation_to_type": "type", "validated": true, "ani": 81.256, "matched_fragments": 1006, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sudanensis", "strain": "strain=SD 504", "accession": "GCA_023614315.1", "taxid": 436397, "species_taxid": 436397, "relation_to_type": "type", "validated": true, "ani": 81.21, "matched_fragments": 1028, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces filamentosus", "strain": "strain=JCM 4122", "accession": "GCA_014654895.1", "taxid": 67294, "species_taxid": 67294, "relation_to_type": "type", "validated": true, "ani": 81.1646, "matched_fragments": 1343, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces roseolus", "strain": "strain=JCM 4411", "accession": "GCA_014649855.1", "taxid": 67358, "species_taxid": 67358, "relation_to_type": "type", "validated": true, "ani": 81.1362, "matched_fragments": 1268, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fradiae", "strain": "strain=DSM 40063", "accession": "GCA_002119225.1", "taxid": 1906, "species_taxid": 1906, "relation_to_type": "suspected-type", "validated": true, "ani": 81.1001, "matched_fragments": 1103, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fradiae", "strain": "strain=ATCC 10745", "accession": "GCA_008704425.1", "taxid": 1906, "species_taxid": 1906, "relation_to_type": "suspected-type", "validated": true, "ani": 81.0533, "matched_fragments": 1188, "total_fragments": 2715, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fradiae", "strain": "strain=ATCC 10745", "accession": 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