{ "type": "genome", "identifier": "GCF_007858285.1", "organism": "Pseudomonas brenneri", "title": "Pseudomonas brenneri", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Technische Universitaet Muenchen", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007858285.1", "bioproject": "PRJNA224116", "biosample": "SAMN12045497", "wgs_master": "VFIL00000000.1", "refseq_category": "na", "taxid": "129817", "species_taxid": "129817", "organism_name": "Pseudomonas brenneri", "infraspecific_name": "strain=DSM 15294", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/06", "asm_name": "ASM785828v1", "asm_submitter": "Technische Universitaet Muenchen", "gbrs_paired_asm": "GCA_007858285.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/858/285/GCF_007858285.1_ASM785828v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5987712", "genome_size_ungapped": "5987712", "gc_percent": "60.000000", "replicon_count": "0", "scaffold_count": "31", "contig_count": "31", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-17", "total_gene_count": "5541", "protein_coding_gene_count": "5382", "non_coding_gene_count": "66", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-06", "dateModified": "2019-08-06", "datePublished": "2019-08-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas brenneri" ], "sample_taxid": [ "129817" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ 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95, "status": "conclusive" }, { "organism_name": "Pseudomonas brenneri", "strain": "strain=JCM 13307", "accession": "GCA_014646715.1", "taxid": 129817, "species_taxid": 129817, "relation_to_type": "type", "validated": true, "ani": 99.9973, "matched_fragments": 1964, "total_fragments": 1982, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas proteolytica", "strain": "strain=DSM 15321", "accession": "GCA_007858275.1", "taxid": 219574, "species_taxid": 219574, "relation_to_type": "type", "validated": true, "ani": 92.3119, "matched_fragments": 1625, "total_fragments": 1982, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas proteolytica", "strain": "strain=CCUG 51515T", "accession": "GCA_008692865.1", "taxid": 219574, "species_taxid": 219574, "relation_to_type": "type", "validated": true, "ani": 92.3049, "matched_fragments": 1602, "total_fragments": 1982, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas gessardii", "strain": "", "accession": "GCA_900625085.1", "taxid": 78544, "species_taxid": 78544, "relation_to_type": "type", "validated": true, "ani": 91.825, "matched_fragments": 1623, "total_fragments": 1982, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas gessardii", "strain": "strain=DSM 17152", "accession": "GCA_001983165.1", "taxid": 78544, "species_taxid": 78544, "relation_to_type": "type", "validated": true, "ani": 91.8048, "matched_fragments": 1632, "total_fragments": 1982, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas gessardii", "strain": "strain=DSM 17152", "accession": "GCA_009671285.1", "taxid": 78544, "species_taxid": 78544, "relation_to_type": "type", "validated": true, "ani": 91.8048, "matched_fragments": 1632, "total_fragments": 1982, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas marginalis", "strain": "strain=DSM 13124", "accession": 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