{ "type": "genome", "identifier": "GCF_007858475.1", "organism": "Tsukamurella conjunctivitidis", "title": "Tsukamurella conjunctivitidis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "The University of Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007858475.1", "bioproject": "PRJNA224116", "biosample": "SAMN12158045", "wgs_master": "VIGX00000000.1", "refseq_category": "reference genome", "taxid": "2592068", "species_taxid": "2592068", "organism_name": "Tsukamurella conjunctivitidis", "infraspecific_name": "strain=HKU72", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/06", "asm_name": "ASM785847v1", "asm_submitter": "The University of Hong Kong", "gbrs_paired_asm": "GCA_007858475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/858/475/GCF_007858475.1_ASM785847v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5076401", "genome_size_ungapped": "5076401", "gc_percent": "70.500000", "replicon_count": "0", "scaffold_count": "345", "contig_count": "345", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007858475.1-RS_2024_08_05", "annotation_date": "2024-08-05", "total_gene_count": "5193", "protein_coding_gene_count": "5025", "non_coding_gene_count": "63", "pubmed_id": "31738158" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-06", "dateModified": "2019-08-06", "datePublished": "2019-08-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Tsukamurella conjunctivitidis" ], "sample_taxid": [ "2592068" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], 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true, "ani": 100.0, "matched_fragments": 1601, "total_fragments": 1608, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Tsukamurella tyrosinosolvens", "strain": "strain=DSM 44234", "accession": "GCA_900104775.1", "taxid": 57704, "species_taxid": 57704, "relation_to_type": "type", "validated": true, "ani": 90.0427, "matched_fragments": 1341, "total_fragments": 1608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tsukamurella sputi", "strain": "strain=HKU70", "accession": "GCA_007858445.1", "taxid": 2591848, "species_taxid": 2591848, "relation_to_type": "type", "validated": true, "ani": 90.0412, "matched_fragments": 1308, "total_fragments": 1608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tsukamurella tyrosinosolvens", "strain": "strain=CCUG 38499", "accession": "GCA_001575155.1", "taxid": 57704, "species_taxid": 57704, "relation_to_type": "type", "validated": true, "ani": 89.9554, "matched_fragments": 1350, 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"Demequina activiva", "strain": "strain=NBRC 110675", "accession": "GCA_016862815.1", "taxid": 1582364, "species_taxid": 1582364, "relation_to_type": "type", "validated": true, "ani": 76.481, "matched_fragments": 154, "total_fragments": 1608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Demequina salsinemoris", "strain": "strain=NBRC 105323", "accession": "GCA_000974805.1", "taxid": 577470, "species_taxid": 577470, "relation_to_type": "type", "validated": true, "ani": 76.3645, "matched_fragments": 219, "total_fragments": 1608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces provencensis", "strain": "strain=SN12", "accession": "GCA_900155435.1", "taxid": 1720198, "species_taxid": 1720198, "relation_to_type": "type", "validated": true, "ani": 76.3627, "matched_fragments": 130, "total_fragments": 1608, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces polynesiensis", "strain": "strain=MS2", 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