# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence01:1..3092(+)	partial			WP_011101486.1	KxYKxGKxW signal peptide domain-containing protein	100.0	46.4	96.3
MGA_2	LOCUS_00020	sequence01:3288..3584(+)	partial			WP_003640388.1	alcohol dehydrogenase	100.0	62.8	99.0
MGA_41	LOCUS_00410	sequence01:40282..40854(-)	partial			WP_000257255.1	site-specific integrase	97.4	46.1	28.8
MGA_42	LOCUS_00420	sequence01:40903..41328(-)	frameshift,internal_stop_codon	40902..40904(-)	41363	WP_010774185.1	site-specific integrase	91.5	32.6	43.6
MGA_89	LOCUS_00890	sequence01:87101..88333(-)	partial			WP_003640480.1	iron ABC transporter permease	100.0	74.1	98.3
MGA_104	LOCUS_01040	sequence01:102840..103160(+)	frameshift		103130	WP_003576872.1	GNAT family N-acetyltransferase	90.6	55.5	49.0
MGA_128	LOCUS_01280	sequence01:127095..127760(+)	partial			WP_011101552.1	ATP-binding cassette domain-containing protein	50.2	37.1	99.1
MGA_219	LOCUS_02190	sequence01:229749..230108(+)	partial			WP_003646031.1	O-antigen ligase family protein	100.0	29.7	97.5
MGA_235	LOCUS_02350	sequence01:248125..250005(-)	partial			WP_005898589.1	subtype B tannase	49.4	61.5	33.7
MGA_243	LOCUS_02430	sequence01:258272..258823(-)	partial			WP_011181746.1	TetR/AcrR family transcriptional regulator	39.3	34.1	43.1
MGA_281	LOCUS_02810	sequence01:295545..295814(-)	partial			WP_011101609.1	diacylglycerol kinase family protein	100.0	64.5	85.4
MGA_326	LOCUS_03260	sequence01:341132..343045(-)	partial			WP_011101641.1	translation initiation factor IF-2	95.9	71.2	99.3
MGA_357	LOCUS_03570	sequence01:370804..371187(+)	partial			WP_002387265.1	SHOCT domain-containing protein	98.4	58.4	41.6
MGA_433	LOCUS_04320	sequence02:77399..78724(-)	internal_stop_codon	78956..78958(-)		WP_011100911.1	discoidin domain-containing protein	100.0	46.5	100.0
MGA_434	LOCUS_04330	sequence02:78956..80245(-)	internal_stop_codon	78956..78958(-)		WP_011100911.1	discoidin domain-containing protein	100.0	45.3	99.3
MGA_475	LOCUS_04740	sequence02:127937..128542(+)	partial			WP_002280228.1	helix-turn-helix transcriptional regulator	93.0	66.0	42.1
MGA_530	LOCUS_05290	sequence02:186355..186561(-)	partial			WP_011100957.1	LysM peptidoglycan-binding domain-containing protein	100.0	25.5	100.0
MGA_589	LOCUS_05880	sequence02:242010..242330(+)	partial			WP_011100976.1	hypothetical protein	100.0	70.2	92.5
MGA_616	LOCUS_06150	sequence03:30178..31074(-)	internal_stop_codon	31099..31101(-)		WP_011101713.1	glutamate--cysteine ligase	100.0	72.3	98.7
MGA_617	LOCUS_06160	sequence03:31099..31416(-)	internal_stop_codon	31099..31101(-)		WP_011101713.1	glutamate--cysteine ligase	100.0	25.5	100.0
MGA_685	LOCUS_06840	sequence03:98586..98798(-)	partial			WP_011101733.1	GH25 family lysozyme	98.6	18.0	72.5
MGA_686	LOCUS_06850	sequence03:98978..99400(-)	partial			WP_011101731.1	phage holin	69.3	77.6	86.6
MGA_696	LOCUS_06950	sequence03:109563..114716(-)	partial			WP_011475661.1	tape measure protein	38.4	55.1	28.5
MGA_725	LOCUS_07240	sequence03:130190..130987(-)	partial			WP_010905691.1	phage replisome organiser protein	72.1	72.2	35.1
MGA_770	LOCUS_07690	sequence03:170129..170509(+)	partial			WP_003644123.1	polyprenyl synthetase family protein	86.5	33.5	100.0
MGA_771	LOCUS_07700	sequence03:170577..170936(+)	partial			WP_003644123.1	polyprenyl synthetase family protein	100.0	36.6	96.6
MGA_772	LOCUS_07710	sequence03:171126..172103(+)	partial			WP_011027855.1	L,D-transpeptidase family protein	57.5	81.1	31.7
MGA_796	LOCUS_07940	sequence04:7364..8047(+)	partial			WP_011101919.1	bacterial Ig-like domain-containing protein	99.6	21.8	93.4
MGA_914	LOCUS_09120	sequence04:133756..134874(+)	partial			WP_000666879.1	hypothetical protein	59.9	47.9	25.9
MGA_997	LOCUS_09940	sequence05:73059..74030(+)	frameshift		74021	WP_011102198.1	PTS fructose-like transporter subunit IIBC	99.4	66.2	99.1
MGA_998	LOCUS_09950	sequence05:74110..74517(+)	frameshift		74015	WP_011102198.1	PTS fructose-like transporter subunit IIBC	100.0	27.8	94.8
MGA_1007	LOCUS_10040	sequence05:85402..85575(-)	frameshift		85577	WP_003643568.1	PTS transporter subunit EIIC	63.2	8.1	100.0
MGA_1067	LOCUS_10640	sequence06:5941..6312(-)	frameshift		6365	WP_011100871.1	DUF3658 domain-containing protein	100.0	53.9	95.9
MGA_1068	LOCUS_10650	sequence06:6342..6617(-)	frameshift		6365	WP_011100871.1	DUF3658 domain-containing protein	95.6	38.2	96.6
MGA_1186	LOCUS_11830	sequence06:147191..147415(-)	frameshift,internal_stop_codon	147474..147476(-),147450..147452(-)	147407	WP_003584159.1	hypothetical protein	95.9	67.0	43.7
MGA_1187	LOCUS_11840	sequence06:147801..148355(-)	frameshift		148323,148563,147804,147608	WP_065904166.1	Y-family DNA polymerase	94.0	44.8	70.8
MGA_1188	LOCUS_11850	sequence06:148292..148471(-)	frameshift		148688,148562,148322	WP_065904166.1	Y-family DNA polymerase	81.4	11.0	75.0
MGA_1190	LOCUS_11870	sequence06:149060..>149726(-)	partial			WP_011860904.1	glycosylating toxin TcdA	68.3	5.8	27.2
MGA_1247	LOCUS_12440	sequence07:60453..60632(-)	frameshift		60603,60660,60846,60678	WP_125982402.1	DDE-type integrase/transposase/recombinase	91.5	20.0	90.7
MGA_1248	LOCUS_12450	sequence07:60823..61068(-)	frameshift		60848,61106,60659,60614,60680	WP_125982402.1	DDE-type integrase/transposase/recombinase	90.1	27.0	91.8
MGA_1249	LOCUS_12460	sequence07:61330..61629(-)	frameshift,internal_stop_codon	61869..61871(-),61328..61330(-)	61865,61666,61633	WP_035148028.1	helix-turn-helix domain-containing protein	100.0	44.2	70.7
MGA_1250	LOCUS_12470	sequence07:61661..61864(-)	frameshift,internal_stop_codon	61869..61871(-)	61865,61666,61633	WP_035148028.1	helix-turn-helix domain-containing protein	94.0	28.1	47.6
MGA_1252	LOCUS_12490	sequence07:62648..64579(-)	partial			WP_011476570.1	AAA family ATPase	99.2	69.4	35.1
MGA_1267	LOCUS_12640	sequence07:80887..81405(+)	partial			WP_072535403.1	sulfite exporter TauE/SafE family protein	100.0	68.0	89.5
MGA_1283	LOCUS_12800	sequence07:94385..95377(-)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	80.0	48.6	98.1
MGA_1284	LOCUS_12810	sequence07:95380..96570(-)	partial			WP_011101187.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	71.0	51.7	96.1
MGA_1287	LOCUS_12840	sequence07:98720..99229(-)	partial			WP_003641117.1	hypothetical protein	54.4	54.4	40.2
MGA_1318	LOCUS_13150	sequence08:537..1343(-)	partial			WP_010903655.1	MFS transporter	68.7	41.2	32.4
MGA_1406	LOCUS_14030	sequence08:106759..107202(-)	partial			WP_003643951.1	ComF family protein	100.0	65.6	94.6
MGA_1474	LOCUS_14700	sequence09:60889..61350(-)	partial			WP_003576585.1	fructose-specific PTS transporter subunit EIIC	91.5	21.1	36.4
MGA_1534	LOCUS_15300	sequence10:4254..4484(+)	frameshift,internal_stop_codon	4482..4484(+)	4487	WP_002263344.1	aldo/keto reductase	94.7	25.7	65.3
MGA_1535	LOCUS_15310	sequence10:4576..5115(+)	frameshift		4481	WP_004080532.1	aldo/keto reductase	98.3	61.5	52.8
MGA_1537	LOCUS_15330	sequence10:6014..6424(-)	internal_stop_codon	6515..6517(-)		WP_011101863.1	SH3 domain-containing protein	94.9	17.1	52.2
MGA_1538	LOCUS_15340	sequence10:6515..6967(-)	internal_stop_codon	6515..6517(-),7043..7045(-)		WP_011101863.1	SH3 domain-containing protein	99.3	19.9	42.3
MGA_1539	LOCUS_15350	sequence10:7043..7849(-)	internal_stop_codon	7043..7045(-)		WP_011101863.1	SH3 domain-containing protein	94.4	35.2	25.4
MGA_1541	LOCUS_15370	sequence10:10522..11064(+)	internal_stop_codon	11062..11064(+)		WP_054398098.1	NADP-dependent oxidoreductase	100.0	56.4	94.4
MGA_1542	LOCUS_15380	sequence10:11155..11481(+)	internal_stop_codon	11062..11064(+)		WP_054398098.1	NADP-dependent oxidoreductase	100.0	33.9	94.4
MGA_1556	LOCUS_15520	sequence10:27856..28071(+)	partial			WP_080235523.1	hypothetical protein	71.8	68.9	72.5
MGA_1558	LOCUS_15540	sequence10:28867..31533(-)	partial			WP_076642750.1	MucBP domain-containing protein	82.2	61.4	93.8
MGA_1735	LOCUS_17300	sequence12:33743..34150(-)	partial			WP_011101245.1	prepilin peptidase	100.0	59.7	85.2
MGA_1787	LOCUS_17820	sequence12:73018..73938(+)	frameshift		73914	WP_011101252.1	3-dehydroquinate synthase	98.4	83.8	97.0
MGA_1806	LOCUS_18010	sequence12:92682..92882(-)	frameshift		92865	WP_011674809.1	IS30 family transposase	89.4	17.8	66.1
MGA_1807	LOCUS_18020	sequence12:92854..93681(-)	frameshift		92865	WP_011674315.1	IS30 family transposase	99.3	82.2	64.8
MGA_1815	LOCUS_18100	sequence13:4533..4850(+)	partial			WP_015825158.1	cupin domain-containing protein	100.0	60.3	100.0
MGA_1883	LOCUS_18780	sequence13:74835..75614(-)	frameshift		75829	WP_003642905.1	PTS sugar transporter subunit IIA	97.7	36.6	36.8
MGA_1884	LOCUS_18790	sequence13:75815..76882(-)	frameshift		75829	WP_003642905.1	PTS sugar transporter subunit IIA	95.8	49.5	33.3
MGA_1885	LOCUS_18800	sequence13:77014..77451(+)	partial			WP_003563240.1	PTS sugar transporter subunit IIA	98.6	20.6	37.5
MGA_1939	LOCUS_19340	sequence14:26831..27301(-)	partial			WP_014565877.1	flavodoxin	87.2	36.1	39.7
MGA_1940	LOCUS_19350	sequence14:27383..27679(-)	partial			WP_003566985.1	MerR family transcriptional regulator	82.7	60.4	46.9
MGA_1949	LOCUS_19440	sequence14:35415..35747(-)	internal_stop_codon	35415..35417(-)		WP_214417977.1	hypothetical protein	100.0	59.1	72.7
MGA_1972	LOCUS_19670	sequence14:66879..67715(-)	frameshift		67789	WP_003644782.1	MFS transporter	100.0	66.8	94.6
MGA_1973	LOCUS_19680	sequence14:67739..68128(-)	frameshift		67789	WP_003644782.1	MFS transporter	92.2	28.1	97.5
MGA_1988	LOCUS_19830	sequence14:85091..85288(-)	partial			WP_003642209.1	hypothetical protein	50.8	51.6	100.0
MGA_1993	LOCUS_19880	sequence15:189..434(-)	partial			WP_003643130.1	hypothetical protein	74.1	74.1	100.0
MGA_2011	LOCUS_20060	sequence15:24020..24433(+)	frameshift		24397	WP_003645251.1	type II CAAX endopeptidase family protein	92.0	55.3	99.2
MGA_2012	LOCUS_20070	sequence15:24424..24705(+)	frameshift		24397	WP_003645251.1	type II CAAX endopeptidase family protein	100.0	40.8	100.0
MGA_2043	LOCUS_20380	sequence15:57642..58052(-)	partial			WP_011101349.1	accessory Sec system glycosyltransferase Asp1	86.8	23.2	100.0
MGA_2046	LOCUS_20410	sequence15:61359..69254(-)	partial			WP_001111655.1	Ig-like domain-containing protein	15.7	8.6	24.6
MGA_2169	LOCUS_21630	sequence17:35827..36372(-)	frameshift		36298	WP_011101000.1	CPBP family intramembrane metalloprotease	89.0	70.6	42.9
MGA_2196	LOCUS_21900	sequence17:60449..60586(-)	internal_stop_codon	60449..60451(-),60593..60595(-)		WP_009931433.1	hypothetical protein	97.8	38.3	56.8
MGA_2198	LOCUS_21920	sequence17:61689..61880(-)	partial			WP_011100985.1	hypothetical protein	54.0	37.0	85.3
MGA_2199	LOCUS_21930	sequence17:61962..62153(-)	internal_stop_codon	62202..62204(-)		WP_011100984.1	hypothetical protein	96.8	70.1	68.9
MGA_2258	LOCUS_22520	sequence18:59947..60876(-)	internal_stop_codon	61069..61071(-)		WP_011674142.1	site-specific integrase	95.1	77.1	35.9
MGA_2259	LOCUS_22530	sequence18:61477..61662(-)	internal_stop_codon	61477..61479(-),61870..61872(-)		WP_100206281.1	IS982 family transposase	100.0	23.6	46.8
MGA_2346	LOCUS_23400	sequence20:41043..41894(+)	partial			WP_011101277.1	serine hydrolase domain-containing protein	98.6	72.6	48.6
MGA_2385	LOCUS_23780	sequence21:24513..25121(+)	frameshift		25379,25022	WP_003643249.1	dTDP-glucose 4,6-dehydratase	84.2	50.9	69.0
MGA_2386	LOCUS_23790	sequence21:25777..26118(-)	internal_stop_codon	26128..26130(-)		WP_002289249.1	ISL3 family transposase	36.3	9.5	68.3
MGA_2387	LOCUS_23800	sequence21:26128..26811(-)	internal_stop_codon	26128..26130(-)		WP_014748796.1	ISL3 family transposase	97.8	53.5	40.1
MGA_2401	LOCUS_23940	sequence21:37281..38228(+)	partial			WP_161799666.1	capsular polysaccharide synthesis protein	67.6	67.7	36.4
MGA_2402	LOCUS_23950	sequence21:38231..38926(+)	partial			WP_103394993.1	DapH/DapD/GlmU-related protein	52.4	73.8	40.5
MGA_2421	LOCUS_24130	sequence22:9020..9403(+)	partial			WP_003645451.1	preprotein translocase subunit YajC	74.8	74.8	92.6
MGA_2467	LOCUS_24590	sequence23:246..971(-)	frameshift		1041	WP_003644879.1	iron-containing alcohol dehydrogenase	100.0	61.8	99.2
MGA_2468	LOCUS_24600	sequence23:973..1419(-)	frameshift		1041	WP_003644879.1	iron-containing alcohol dehydrogenase	85.1	32.3	100.0
MGA_2481	LOCUS_24730	sequence23:15252..15581(-)	internal_stop_codon	15615..15617(-)		WP_011102015.1	SDR family oxidoreductase	100.0	43.4	100.0
MGA_2482	LOCUS_24740	sequence23:15615..16007(-)	internal_stop_codon	15615..15617(-)		WP_011102015.1	SDR family oxidoreductase	100.0	51.8	99.2
MGA_2514	LOCUS_25060	sequence24:745..1059(+)	partial			WP_118828336.1	metalloregulator ArsR/SmtB family transcription factor	78.8	65.6	37.8
MGA_2568	LOCUS_25600	sequence25:18997..19440(-)	frameshift		19538	WP_003643849.1	cyclic di-AMP binding protein CbpA	100.0	69.3	100.0
MGA_2592	LOCUS_25830	sequence26:7755..8045(-)	frameshift		7992	WP_112297264.1	hypothetical protein	82.3	19.2	100.0
MGA_2593	LOCUS_25840	sequence26:7960..8919(-)	frameshift		7992	WP_112297264.1	hypothetical protein	97.5	75.5	93.6
MGA_2606	LOCUS_25970	sequence26:22456..22788(+)	frameshift		22785	WP_011101392.1	MFS transporter	100.0	27.9	100.0
MGA_2607	LOCUS_25980	sequence26:22776..23645(+)	frameshift		22779	WP_011101392.1	MFS transporter	99.0	72.6	99.3
MGA_2623	LOCUS_26130	sequence27:7931..13762(-)	partial			WP_011101123.1	tape measure protein	39.3	51.3	27.4
MGA_2822	LOCUS_28090	sequence33:2485..3168(+)	frameshift		3090	WP_003644185.1	helix-turn-helix transcriptional regulator	88.5	81.0	97.5
MGA_2841	LOCUS_28280	sequence33:20695..20853(-)	frameshift		20849,20930,20876	WP_011100990.1	Imm63 family immunity protein	96.2	37.0	84.0
MGA_2878	LOCUS_28620	sequence36:809..3529(+)	partial			WP_011101804.1	MucBP domain-containing protein	79.9	72.7	41.9
MGA_2889	LOCUS_28730	sequence36:11336..12055(-)	partial			WP_011101077.1	DNA/RNA non-specific endonuclease	29.7	20.7	62.5
MGA_2892	LOCUS_28760	sequence36:13371..14306(-)	partial			WP_011674688.1	hypothetical protein	51.4	56.4	30.7
MGA_2905	LOCUS_28890	sequence37:13526..15253(+)	partial			WP_011100982.1	pre-toxin TG domain-containing protein	41.0	39.8	51.0
MGA_2931	LOCUS_29140	sequence39:11043..11882(+)	frameshift		11801	WP_003644751.1	AEC family transporter	90.0	81.5	98.8
MGA_2951	LOCUS_29340	sequence41:6208..6429(-)	internal_stop_codon	6208..6210(-)		WP_011101314.1	helix-turn-helix domain-containing protein	100.0	57.1	48.0
MGA_2953	LOCUS_29360	sequence41:7002..7487(-)	partial			WP_011101323.1	MucBP domain-containing protein	82.6	13.4	29.8
MGA_2956	LOCUS_29390	sequence41:7847..8422(-)	internal_stop_codon	8525..8527(-)		WP_011109529.1	BspA family leucine-rich repeat surface protein	79.6	15.9	37.5
MGA_2957	LOCUS_29400	sequence41:8525..8974(-)	internal_stop_codon	8525..8527(-)		WP_011101323.1	MucBP domain-containing protein	100.0	14.4	30.5
MGA_2959	LOCUS_29420	sequence41:10227..10424(-)	frameshift,internal_stop_codon	10623..10625(-),10446..10448(-),10653..10655(-)	10168,10051,10253	WP_011100920.1	IS1182 family transposase	87.7	16.5	48.4
MGA_2960	LOCUS_29430	sequence41:10446..10583(-)	frameshift,internal_stop_codon	10623..10625(-),10446..10448(-),10653..10655(-)	10168,10253	WP_011102189.1	IS1182 family transposase	100.0	7.9	80.0
MGA_2961	LOCUS_29440	sequence41:10653..10859(-)	frameshift,internal_stop_codon	10652..10654(-),10877..10879(-),10622..10624(-),10445..10447(-)	11002	WP_013355994.1	IS1182 family transposase	97.1	12.0	87.9
MGA_2962	LOCUS_29450	sequence41:10985..11194(-)	frameshift,internal_stop_codon	10877..10879(-)	11002,11366	WP_011102189.1	IS1182 family transposase	97.1	12.1	79.1
MGA_2963	LOCUS_29460	sequence41:11334..11543(-)	frameshift		11366	WP_011102189.1	IS1182 family transposase	84.1	10.4	77.6
MGA_2987	LOCUS_29680	sequence44:4395..4598(+)	partial			WP_003645582.1	hypothetical protein	65.7	65.7	97.7
MGA_2995	LOCUS_29750	sequence45:1514..2287(+)	internal_stop_codon	2285..2287(+)		WP_003561810.1	IS30-like element ISLpl1 family transposase	100.0	83.2	98.4
MGA_3019	LOCUS_29970	sequence50:255..1157(+)	frameshift		189	WP_011101247.1	ISL3-like element ISP1 family transposase	100.0	71.4	95.0
MGA_3033	LOCUS_30050	sequence57:393..641(-)	frameshift,internal_stop_codon	393..395(-)	612	WP_011101833.1	SpaA isopeptide-forming pilin-related protein	87.8	10.2	59.7
MGA_3034	LOCUS_30060	sequence57:592..>1125(-)	frameshift,internal_stop_codon	393..395(-)	612	WP_011101833.1	SpaA isopeptide-forming pilin-related protein	96.6	24.7	43.5
MGA_3035	LOCUS_30070	sequence58:113..286(-)	internal_stop_codon	113..115(-)		WP_005808874.1	group II intron reverse transcriptase/maturase	100.0	12.2	70.2
