{ "type": "genome", "identifier": "GCF_007990735.1", "organism": "Nocardia neocaledoniensis NBRC 108232", "title": "Nocardia neocaledoniensis NBRC 108232", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007990735.1", "bioproject": "PRJNA224116", "biosample": "SAMD00169716", "wgs_master": "BJWZ00000000.1", "refseq_category": "na", "taxid": "1210080", "species_taxid": "236511", "organism_name": "Nocardia neocaledoniensis NBRC 108232", "infraspecific_name": "strain=NBRC 108232", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/01", "asm_name": "ASM799073v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_007990735.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/990/735/GCF_007990735.1_ASM799073v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7255438", "genome_size_ungapped": "7255438", "gc_percent": "69.500000", "replicon_count": "0", "scaffold_count": "402", "contig_count": "402", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007990735.1-RS_2024_09_09", "annotation_date": "2024-09-09", "total_gene_count": "7045", "protein_coding_gene_count": "6790", "non_coding_gene_count": "58", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-01", "dateModified": "2019-08-01", "datePublished": "2019-08-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardia neocaledoniensis NBRC 108232" ], "sample_taxid": [ "1210080" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "New Caledonia" ], "sample_host_location_id": [], "data_size": "1.967 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 2.78, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7255438", "Number of Sequences": "402", "Longest Sequences (bp)": "191971", "N50 (bp)": "35142", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.6", "Number of CDSs": "6488", "Average Protein Length": "309.9", "Coding Ratio (%)": "83.1", "Number of rRNAs": "2", "Number of tRNAs": "61", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Nocardia neocaledoniensis", "strain": "strain=NBRC 108232", "accession": "GCA_007990735.1", "taxid": 236511, "species_taxid": 236511, 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