{ "type": "genome", "identifier": "GCF_007992095.1", "organism": "Ciceribacter naphthalenivorans", "title": "Ciceribacter naphthalenivorans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation Biological Resource Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007992095.1", "bioproject": "PRJNA224116", "biosample": "SAMD00172651", "wgs_master": "BJZP00000000.1", "refseq_category": "reference genome", "taxid": "1118451", "species_taxid": "1118451", "organism_name": "Ciceribacter naphthalenivorans", "infraspecific_name": "strain=NBRC 107585", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/07/31", "asm_name": "ASM799209v1", "asm_submitter": "National Institute of Technology and Evaluation Biological Resource Center", "gbrs_paired_asm": "GCA_007992095.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/992/095/GCF_007992095.1_ASM799209v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4956527", "genome_size_ungapped": "4956527", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "139", "contig_count": "139", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007992095.1-RS_2024_08_26", "annotation_date": "2024-08-26", "total_gene_count": "4741", "protein_coding_gene_count": "4574", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-07-31", "dateModified": "2019-07-31", "datePublished": "2019-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Ciceribacter naphthalenivorans" ], "sample_taxid": [ "1118451" ], "sample_host_organism": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium rhizophilum", "strain": "strain=7209-2", "accession": "GCA_004912145.1", "taxid": 1850373, "species_taxid": 1850373, "relation_to_type": "type", "validated": true, "ani": 79.8573, "matched_fragments": 703, "total_fragments": 1587, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella granuli", "strain": "strain=DSM 18401", "accession": "GCA_004341885.1", "taxid": 323621, "species_taxid": 323621, "relation_to_type": "type", "validated": true, "ani": 79.4535, "matched_fragments": 659, "total_fragments": 1587, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella yambaruensis", "strain": "strain=DSM 18801", "accession": "GCA_022899355.1", "taxid": 415996, "species_taxid": 415996, "relation_to_type": "type", "validated": true, "ani": 79.4015, "matched_fragments": 624, "total_fragments": 1587, "ani_threshold": 95, "status": "below_threshold" }, { 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