{ "type": "genome", "identifier": "GCF_007992135.1", "organism": "Kocuria flava", "title": "Kocuria flava", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation Biological Resource Center", "publication": [ {} ], "properties": { "assembly_accession": "GCF_007992135.1", "bioproject": "PRJNA224116", "biosample": "SAMD00172653", "wgs_master": "BJZR00000000.1", "refseq_category": "na", "taxid": "446860", "species_taxid": "446860", "organism_name": "Kocuria flava", "infraspecific_name": "strain=NBRC 107626", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/07/31", "asm_name": "ASM799213v1", "asm_submitter": "National Institute of Technology and Evaluation Biological Resource Center", "gbrs_paired_asm": "GCA_007992135.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/992/135/GCF_007992135.1_ASM799213v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3605512", "genome_size_ungapped": "3605512", "gc_percent": "74.000000", "replicon_count": "0", "scaffold_count": "263", "contig_count": "263", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_007992135.1-RS_2024_09_09", "annotation_date": "2024-09-09", "total_gene_count": "3345", "protein_coding_gene_count": "3228", "non_coding_gene_count": "56", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-07-31", "dateModified": "2019-07-31", "datePublished": "2019-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Kocuria flava" ], "sample_taxid": [ "446860" ], "sample_host_organism": [], "sample_host_organism_id": 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{ "organism_name": "Micrococcus luteus", "strain": "strain=ATCC 4698", "accession": "GCA_003417425.1", "taxid": 1270, "species_taxid": 1270, "relation_to_type": "type", "validated": true, "ani": 79.0087, "matched_fragments": 289, "total_fragments": 1077, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter mobilis", "strain": "strain=E918", "accession": "GCA_012395835.1", "taxid": 2724944, "species_taxid": 2724944, "relation_to_type": "type", "validated": true, "ani": 78.0912, "matched_fragments": 385, "total_fragments": 1077, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter jiangjiafuii", "strain": "strain=zg-ZUI227", "accession": "GCA_017898065.1", "taxid": 2817475, "species_taxid": 2817475, "relation_to_type": "type", "validated": true, "ani": 77.7188, "matched_fragments": 267, "total_fragments": 1077, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter jiangjiafuii", "strain": 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"N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.009, "cell_length": -0.009, "doubling_h": null, "growth_tmp": 28.0, "optimum_tmp": 29.863, "optimum_ph": 7.416, "genome_size": 3638341.5, "gc_content": 73.945, "coding_genes": 3077.667, "rRNA16S_genes": 3.0, "tRNA_genes": 50.0, "gram_stain": 1.0, "sporulation": 0.125, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.0, "coccus_cell_shape": 1.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Kocuria", "flava" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }