{ "type": "genome", "identifier": "GCF_008039565.1", "organism": "Aeromicrobium terrae", "title": "Aeromicrobium terrae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nation Chung Hsing University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008039565.1", "bioproject": "PRJNA224116", "biosample": "SAMN11959603", "wgs_master": "VDUX00000000.1", "refseq_category": "reference genome", "taxid": "2498846", "species_taxid": "2498846", "organism_name": "Aeromicrobium terrae", "infraspecific_name": "strain=CC-CFT486", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/20", "asm_name": "ASM803956v1", "asm_submitter": "Nation Chung Hsing University", "gbrs_paired_asm": "GCA_008039565.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/039/565/GCF_008039565.1_ASM803956v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3135224", "genome_size_ungapped": "3135224", "gc_percent": "70.500000", "replicon_count": "0", "scaffold_count": "14", "contig_count": "14", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008039565.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "3201", "protein_coding_gene_count": "3141", "non_coding_gene_count": "52", "pubmed_id": "33400640" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-20", "dateModified": "2019-08-20", "datePublished": "2019-08-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Aeromicrobium terrae" ], "sample_taxid": [ "2498846" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Taiwan" ], "sample_host_location_id": [], "data_size": "0.832 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3135224", "Number of Sequences": "14", "Longest Sequences (bp)": "712182", "N50 (bp)": "464992", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "70.6", "Number of CDSs": "3143", "Average Protein Length": "315.3", "Coding Ratio (%)": "94.8", "Number of rRNAs": "3", "Number of tRNAs": "47", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Aeromicrobium terrae", "strain": "strain=CC-CFT486", "accession": "GCA_008039565.1", "taxid": 2498846, "species_taxid": 2498846, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1039, "total_fragments": 1039, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Aeromicrobium erythreum", "strain": "strain=AR18", "accession": "GCA_001509405.1", "taxid": 2041, "species_taxid": 2041, "relation_to_type": "type", "validated": true, "ani": 81.1927, "matched_fragments": 575, "total_fragments": 1039, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromicrobium stalagmiti", "strain": "strain=YC3-14", "accession": "GCA_013283745.1", "taxid": 2738988, "species_taxid": 2738988, "relation_to_type": "type", "validated": true, "ani": 81.1324, "matched_fragments": 604, "total_fragments": 1039, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeromicrobium ginsengisoli", "strain": "strain=JCM 14732", "accession": "GCA_004134905.2", "taxid": 363867, "species_taxid": 363867, "relation_to_type": "type", "validated": true, "ani": 80.9834, "matched_fragments": 636, "total_fragments": 1039, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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