{ "type": "genome", "identifier": "GCF_008121305.1", "organism": "Actinomadura decatromicini", "title": "Actinomadura decatromicini", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Japan Collection of Microorganisms, Microbe Division, RIKEN BioResources Center, Tsukuba, Japan", "publication": [ {} ], "properties": { "assembly_accession": "GCF_008121305.1", "bioproject": "PRJNA224116", "biosample": "SAMN12586659", "wgs_master": "VSRQ00000000.1", "refseq_category": "reference genome", "taxid": "2604572", "species_taxid": "2604572", "organism_name": "Actinomadura decatromicini", "infraspecific_name": "strain=CYP1-5", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/08/27", "asm_name": "ASM812130v1", "asm_submitter": "Japan Collection of Microorganisms, Microbe Division, RIKEN BioResources Center, Tsukuba, Japan", "gbrs_paired_asm": "GCA_008121305.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/121/305/GCF_008121305.1_ASM812130v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9304746", "genome_size_ungapped": "9304746", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "17", "contig_count": "17", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_008121305.1-RS_2024_05_04", "annotation_date": "2024-05-04", "total_gene_count": "8451", "protein_coding_gene_count": "8304", "non_coding_gene_count": "82", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-08-27", "dateModified": "2019-08-27", "datePublished": "2019-08-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomadura decatromicini" ], "sample_taxid": [ "2604572" ], 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3093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura graeca", "strain": "strain=32-07", "accession": "GCA_019175365.1", "taxid": 2750812, "species_taxid": 2750812, "relation_to_type": "type", "validated": true, "ani": 83.6905, "matched_fragments": 1801, "total_fragments": 3093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura viridis", "strain": "strain=DSM 43175", "accession": "GCA_015751755.1", "taxid": 58110, "species_taxid": 58110, "relation_to_type": "type", "validated": true, "ani": 81.0684, "matched_fragments": 1506, "total_fragments": 3093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura parmotrematis", "strain": "strain=PM05-2", "accession": "GCA_019458805.1", "taxid": 2864039, "species_taxid": 2864039, "relation_to_type": "type", "validated": true, "ani": 80.9765, "matched_fragments": 1522, "total_fragments": 3093, "ani_threshold": 95, "status": "below_threshold" }, 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