{
    "type": "genome",
    "identifier": "GCF_008151785.1",
    "organism": "Peptacetobacter hiranonis",
    "title": "Peptacetobacter hiranonis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "UIUC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_008151785.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10976983",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "89152",
        "species_taxid": "89152",
        "organism_name": "Peptacetobacter hiranonis",
        "infraspecific_name": "strain=DSM 13275",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/08/30",
        "asm_name": "ASM815178v1",
        "asm_submitter": "UIUC",
        "gbrs_paired_asm": "GCA_008151785.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/008/151/785/GCF_008151785.1_ASM815178v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2521899",
        "genome_size_ungapped": "2521899",
        "gc_percent": "31.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_008151785.1-RS_2024_12_13",
        "annotation_date": "2024-12-13",
        "total_gene_count": "2360",
        "protein_coding_gene_count": "2224",
        "non_coding_gene_count": "127",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-08-30",
    "dateModified": "2019-08-30",
    "datePublished": "2019-08-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Peptacetobacter hiranonis"
        ],
        "sample_taxid": [
            "89152"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.682 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2521899",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "2521899",
        "N50 (bp)": "2521899",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.3",
        "Number of CDSs": "2244",
        "Average Protein Length": "313.0",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "32",
        "Number of tRNAs": "91",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Peptacetobacter hiranonis",
                "strain": "strain=DSM 13275",
                "accession": "GCA_008151785.1",
                "taxid": 89152,
                "species_taxid": 89152,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 837,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Peptacetobacter hiranonis",
                "strain": "strain=DSM 13275",
                "accession": "GCA_000156055.1",
                "taxid": 89152,
                "species_taxid": 89152,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.7957,
                "matched_fragments": 799,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Peptacetobacter hominis",
                "strain": "strain=ZHW00191",
                "accession": "GCA_006861675.1",
                "taxid": 2743610,
                "species_taxid": 2743610,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3527,
                "matched_fragments": 322,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia ilealis",
                "strain": "strain=CRIB",
                "accession": "GCA_900015215.1",
                "taxid": 1115758,
                "species_taxid": 1115758,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0579,
                "matched_fragments": 151,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia hominis",
                "strain": "strain=FRIFI",
                "accession": "GCA_900002575.1",
                "taxid": 1507512,
                "species_taxid": 1507512,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9515,
                "matched_fragments": 179,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Intestinibacter bartlettii",
                "strain": "strain=DSM 16795",
                "accession": "GCA_000154445.1",
                "taxid": 261299,
                "species_taxid": 261299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6658,
                "matched_fragments": 162,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter petrolearius",
                "strain": "strain=LAM0A37",
                "accession": "GCA_020748185.1",
                "taxid": 1460447,
                "species_taxid": 1460447,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1092,
                "matched_fragments": 135,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Intestinibacter bartlettii",
                "strain": "strain=DSM 16795",
                "accession": "GCA_900167285.1",
                "taxid": 261299,
                "species_taxid": 261299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0253,
                "matched_fragments": 162,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Terrisporobacter othiniensis",
                "strain": "strain=08-306576",
                "accession": "GCA_000808015.1",
                "taxid": 1577792,
                "species_taxid": 1577792,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8285,
                "matched_fragments": 149,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Romboutsia weinsteinii",
                "strain": "strain=CCRI-19649",
                "accession": "GCA_002250835.2",
                "taxid": 2020949,
                "species_taxid": 2020949,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1285,
                "matched_fragments": 166,
                "total_fragments": 840,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_008151785.1",
                "gtdb_species": "s__Peptacetobacter hiranonis",
                "ani": 100.0,
                "matched_fragments": 838,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptacetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.84",
                "min_intra_species_ani": "95.69",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900539645.1",
                "gtdb_species": "s__Peptacetobacter sp900539645",
                "ani": 94.1696,
                "matched_fragments": 497,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptacetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.26",
                "min_intra_species_ani": "95.86",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900550335.1",
                "gtdb_species": "s__Peptacetobacter sp900550335",
                "ani": 91.3988,
                "matched_fragments": 413,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptacetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.93",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_006861675.1",
                "gtdb_species": "s__Peptacetobacter hominis",
                "ani": 80.3702,
                "matched_fragments": 321,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Peptacetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_012317385.1",
                "gtdb_species": "s__GCA-900066495 sp900545985",
                "ani": 79.5807,
                "matched_fragments": 154,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__GCA-900066495",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.78",
                "min_intra_species_ani": "98.75",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_900015215.1",
                "gtdb_species": "s__Romboutsia ilealis",
                "ani": 79.071,
                "matched_fragments": 151,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Romboutsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.59",
                "min_intra_species_ani": "98.59",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900002575.1",
                "gtdb_species": "s__Romboutsia_C hominis",
                "ani": 78.8223,
                "matched_fragments": 177,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Romboutsia_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.29",
                "min_intra_species_ani": "95.25",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_902362365.1",
                "gtdb_species": "s__GCA-900066495 sp902362365",
                "ani": 78.0147,
                "matched_fragments": 146,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__GCA-900066495",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_904418825.1",
                "gtdb_species": "s__Romboutsia sp904418825",
                "ani": 77.836,
                "matched_fragments": 149,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Romboutsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.17",
                "min_intra_species_ani": "99.17",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000808015.1",
                "gtdb_species": "s__Terrisporobacter othiniensis",
                "ani": 77.7859,
                "matched_fragments": 153,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Terrisporobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.48",
                "min_intra_species_ani": "99.45",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_002251085.2",
                "gtdb_species": "s__Romboutsia_B maritimum",
                "ani": 77.6135,
                "matched_fragments": 148,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Romboutsia_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_018917235.1",
                "gtdb_species": "s__Clostridioides_A sp002390935",
                "ani": 77.1506,
                "matched_fragments": 114,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Clostridioides_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.42",
                "min_intra_species_ani": "96.30",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_002250835.2",
                "gtdb_species": "s__Romboutsia_A weinsteinii",
                "ani": 77.1285,
                "matched_fragments": 166,
                "total_fragments": 840,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Romboutsia_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Peptacetobacter",
        "hiranonis"
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}